Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0713
         (645 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77666-5|CAB01230.1|  729|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z50029-8|CAA90342.2|  668|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z29115-1|CAA82362.1|  489|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z77666-5|CAB01230.1|  729|Caenorhabditis elegans Hypothetical
           protein K08E7.7 protein.
          Length = 729

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -2

Query: 365 ALDYFYDFFPEELFSEICEYTSMYSVQESGRSLNVSIEKC 246
           +LD      P EL + + E+ + Y+   +GR LN +  +C
Sbjct: 500 SLDQIKIILPRELSTILKEFDTFYNASHNGRRLNWAYSQC 539


>Z50029-8|CAA90342.2|  668|Caenorhabditis elegans Hypothetical
           protein ZC504.3 protein.
          Length = 668

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 230 SNFLWALQHFHHIWVLRLEKKDNTIHEXPESGVLKI 123
           S  L  ++H H +W+L  + K + +     SG+LKI
Sbjct: 414 SQLLSGIEHMHKLWILHRDLKTSNL-LISHSGILKI 448


>Z29115-1|CAA82362.1|  489|Caenorhabditis elegans Hypothetical
           protein T26G10.1 protein.
          Length = 489

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +1

Query: 118 YQIFKTPLSGXSWIVLSFFSSLSTQI*WKC-CNAHKKFDRYKCAHFSIDTFNERPDSWTE 294
           +++ +T  +G S I ++  +    +   K   N  KK D YKC    +    ER    TE
Sbjct: 369 HRVGRTARAGRSGIAITVVTQYDVEAYQKIEANLGKKLDEYKCVENEVMVLVERTQEATE 428


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,909,547
Number of Sequences: 27780
Number of extensions: 317240
Number of successful extensions: 650
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)