Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0711
(733 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC323.01c |||mitochondrial NADH kinase |Schizosaccharomyces po... 57 3e-09
SPAC3H5.11 |||NAD/NADH kinase |Schizosaccharomyces pombe|chr 1||... 53 5e-08
SPCC24B10.02c |||NAD/NADH kinase|Schizosaccharomyces pombe|chr 3... 39 8e-04
SPAC1B1.02c |||NAD/NADH kinase |Schizosaccharomyces pombe|chr 1|... 35 0.010
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 31 0.13
SPBC365.02c |cox10||protoheme IX farnesyltransferase|Schizosacch... 27 2.1
SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomy... 27 2.8
SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces po... 27 3.6
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 26 4.8
SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|ch... 25 8.4
>SPAC323.01c |||mitochondrial NADH kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 56.8 bits (131), Expect = 3e-09
Identities = 25/42 (59%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
Frame = +3
Query: 387 DLTDKIDFIICLGGDGTLLHASSLFQQS-VPPVMAFHLGSLG 509
DL K+D II +GGDGT+LHA+SLF +S +PP+++F LG+LG
Sbjct: 120 DLEQKVDAIITVGGDGTILHAASLFARSGMPPILSFSLGTLG 161
Score = 32.3 bits (70), Expect = 0.073
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 494 LGLVGFLTPFEFNNFQEQVMNVLEGHAALTLRSRLQCVVLRK 619
LG +GFL PF+F +FQ + + + +R RL+ + K
Sbjct: 157 LGTLGFLLPFDFGSFQTAFADFYNSRSFVLMRMRLRVAMKTK 198
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 163 QRLTWYKPPLTVLVIKKVHDAQILAPFVQLV 255
++L W KPP +L++KK D ++ F LV
Sbjct: 55 KQLQWPKPPKNILILKKRMDERVDHCFETLV 85
>SPAC3H5.11 |||NAD/NADH kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 393
Score = 52.8 bits (121), Expect = 5e-08
Identities = 30/90 (33%), Positives = 51/90 (56%)
Frame = +3
Query: 240 LRSASHWLVHDKSMVVFVEAAVLDDTLLAEYGDFTSVKERLMTFRASTDDLTDKIDFIIC 419
L+ +WL+ ++ VF++ ++ D L E + L+ + S D ++
Sbjct: 95 LKEFVYWLISLDNITVFIQKSMED---LFEKTEKIQYWTTLLCTKHS-----QLFDLVLT 146
Query: 420 LGGDGTLLHASSLFQQSVPPVMAFHLGSLG 509
LGGDGT+L+ S LFQ++VPP+M F +G+LG
Sbjct: 147 LGGDGTVLYTSRLFQRTVPPIMPFAMGTLG 176
>SPCC24B10.02c |||NAD/NADH kinase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 449
Score = 38.7 bits (86), Expect = 8e-04
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 461 PAISAAGDGVPLGLVGFLTPFEFNNFQEQVMNVLEGHAALTLRSRLQC 604
P +S + D VP GFLT F +N+Q+ + VL + +L SRLQC
Sbjct: 200 PVLSFSDDDVP----GFLTHFSLSNYQQHLYQVLTQNVSLRFCSRLQC 243
Score = 32.3 bits (70), Expect = 0.073
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 405 DFIICLGGDGTLLHASSLFQQSVPPVMAF 491
D I +G + TLL+ S LFQ+ PPV++F
Sbjct: 176 DLAITIGDNSTLLYTSWLFQKIGPPVLSF 204
>SPAC1B1.02c |||NAD/NADH kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 537
Score = 35.1 bits (77), Expect = 0.010
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 405 DFIICLGGDGTLLHASSLFQQSVPPVMAFHLGSLG 509
D +I +G D L AS LFQ VPPV++F G
Sbjct: 280 DCVITVGDDSAALRASWLFQDVVPPVLSFSTAKAG 314
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 31.5 bits (68), Expect = 0.13
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 246 NEGCQYLGVVNLLDDQHGEGRLVPGQPLRRRILDLHDHGGIF 121
N GC + VV ++DQH QP RR+I+D+ H ++
Sbjct: 103 NSGC-WESVVEFIEDQHESYMRQDQQPDRRKIIDMRIHACLY 143
>SPBC365.02c |cox10||protoheme IX
farnesyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 387
Score = 27.5 bits (58), Expect = 2.1
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 181 KPPLTVLVIKKVHDAQILAPFVQLVTGSFMTKAW 282
KP LTVLV+ + LAP+ L SF T AW
Sbjct: 92 KPRLTVLVVLSTMSSYALAPYPGL---SFNTLAW 122
>SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 256
Score = 27.1 bits (57), Expect = 2.8
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +3
Query: 291 VEAAVLDDTLLAEYGDFTSVKERLMTFRASTDDLTDKIDFIICLGGDGTLLHASSLFQQS 470
V AA+ DDT+ ++T + + ST +LT +DF C + T H + ++
Sbjct: 164 VLAALPDDTVTYPGHEYTKSNAKFSSTIFSTPELTKLVDF--CKNHESTTGHFTIGDEKK 221
Query: 471 VPPVMAFHLGSL 506
P M L S+
Sbjct: 222 FNPFMCLGLESV 233
>SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 942
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 351 KERLMTFRASTDDLTDKIDFIICLGGDGTLLHASSLFQQSVP 476
+ER RA+ + ++ ID II GGDG+L A +F+ P
Sbjct: 272 RERPGRLRAAKNLISAGIDSIIVCGGDGSLTGA-DIFRSDWP 312
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 26.2 bits (55), Expect = 4.8
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 348 PT*SLHTQQGVCRLKLPPRRTPPCFCHERASD*LNEGCQYL-GVVNLLDDQHGE 190
P S ++ G L LPP PP F E A + E + L G ++D+ GE
Sbjct: 16 PFESENSSLGATPLSLPPSSPPPEFSDEAAEALVEEDIEDLDGEALDVEDEEGE 69
>SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|chr
3|||Manual
Length = 923
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +1
Query: 454 HFSSNQCRR*WRSTWARWVSDALRVQQLSGASHE 555
+F + R+ W W SDAL +L+G +
Sbjct: 537 YFDRDIIRKETEGKWLPWSSDALEYMELAGTKQD 570
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,967,098
Number of Sequences: 5004
Number of extensions: 59645
Number of successful extensions: 166
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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