Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0711
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023828-26|CAA19455.2| 431|Caenorhabditis elegans Hypothetical... 31 0.64
AL023828-12|CAA19456.1| 492|Caenorhabditis elegans Hypothetical... 31 0.64
U29614-4|ABD94109.1| 244|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL117202-18|CAB57896.3| 765|Caenorhabditis elegans Hypothetical... 29 4.5
Z96102-3|CAE17868.1| 686|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z81491-16|CAE17747.1| 686|Caenorhabditis elegans Hypothetical p... 28 7.8
Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AL023828-26|CAA19455.2| 431|Caenorhabditis elegans Hypothetical
protein Y17G7B.10a protein.
Length = 431
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 348 VKERLMTFRASTDDLTDKIDFIICLGGDGTLLHASSLFQQSVPPVMAFHLGSLG 509
++ RL+ T + D D + GGDGT L ASS + PV+ + G
Sbjct: 97 IESRLVRRFGYTQEAVDWADAVFSAGGDGTFLMASSRVRTKHKPVIGINTDPQG 150
>AL023828-12|CAA19456.1| 492|Caenorhabditis elegans Hypothetical
protein Y17G7B.10b protein.
Length = 492
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 348 VKERLMTFRASTDDLTDKIDFIICLGGDGTLLHASSLFQQSVPPVMAFHLGSLG 509
++ RL+ T + D D + GGDGT L ASS + PV+ + G
Sbjct: 158 IESRLVRRFGYTQEAVDWADAVFSAGGDGTFLMASSRVRTKHKPVIGINTDPQG 211
>U29614-4|ABD94109.1| 244|Caenorhabditis elegans Hypothetical
protein F18E9.8 protein.
Length = 244
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = -3
Query: 155 GSWICMTMAEFFIILPHGPNCCIGDGAFRDLVLLNVNPRSEIKKNK 18
G+WIC ++ +++L +CCIG V ++N +++ N+
Sbjct: 117 GAWICESIKYLWVVLYDVVSCCIGGSFLFLFVYQSLNTINQMASNR 162
>AL117202-18|CAB57896.3| 765|Caenorhabditis elegans Hypothetical
protein Y47D3A.22 protein.
Length = 765
Score = 28.7 bits (61), Expect = 4.5
Identities = 30/120 (25%), Positives = 47/120 (39%)
Frame = +3
Query: 78 AVPNTTVWTMRQDYEKFRHGHANPGSGVAEADLVQASPHRAGHQEGSRRPDTGTLRSASH 257
AV T WT + ++ P + D + S H H PDT ++ ++
Sbjct: 157 AVNANTGWTDERRDIFLCPVYSGPRLSMIARDNNEPSVHTYKHTIHGYTPDT-LMQVIAN 215
Query: 258 WLVHDKSMVVFVEAAVLDDTLLAEYGDFTSVKERLMTFRASTDDLTDKIDFIICLGGDGT 437
W S + VE+ D + D +L FRA DDL + + ++ LG D T
Sbjct: 216 WGEDALSYALLVESIRSDPQQVRTLFD-----GQLPLFRAVADDLRNVVVMLVALGADRT 270
>Z96102-3|CAE17868.1| 686|Caenorhabditis elegans Hypothetical
protein D1086.9 protein.
Length = 686
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 54 QEN*IPERAVPNTTVWTMRQDYEKFRHGHANPGSGVAEADLVQASPHRAGHQEGSRRPDT 233
QE+ P RA N+ ++ D + R A G +AD Q R+ Q+G++ D
Sbjct: 138 QESQRPARAADNSHKGSLDADADMKRPARAAGQKGTQQADQEQHRGSRSAGQKGTQHFDG 197
Query: 234 GTLRSA 251
R+A
Sbjct: 198 RNTRAA 203
>Z81491-16|CAE17747.1| 686|Caenorhabditis elegans Hypothetical
protein D1086.9 protein.
Length = 686
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 54 QEN*IPERAVPNTTVWTMRQDYEKFRHGHANPGSGVAEADLVQASPHRAGHQEGSRRPDT 233
QE+ P RA N+ ++ D + R A G +AD Q R+ Q+G++ D
Sbjct: 138 QESQRPARAADNSHKGSLDADADMKRPARAAGQKGTQQADQEQHRGSRSAGQKGTQHFDG 197
Query: 234 GTLRSA 251
R+A
Sbjct: 198 RNTRAA 203
>Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical
protein T22B3.2b protein.
Length = 1035
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 178 YKPPLTVLVIKKVHDAQILAPFVQLVTG 261
++PP+T +V++K H A+I F + G
Sbjct: 841 FRPPITYIVVQKRHHARIFCKFPNDMVG 868
>Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical
protein T22B3.2a protein.
Length = 1032
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 178 YKPPLTVLVIKKVHDAQILAPFVQLVTG 261
++PP+T +V++K H A+I F + G
Sbjct: 838 FRPPITYIVVQKRHHARIFCKFPNDMVG 865
>Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical
protein T22B3.2b protein.
Length = 1035
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 178 YKPPLTVLVIKKVHDAQILAPFVQLVTG 261
++PP+T +V++K H A+I F + G
Sbjct: 841 FRPPITYIVVQKRHHARIFCKFPNDMVG 868
>Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical
protein T22B3.2a protein.
Length = 1032
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 178 YKPPLTVLVIKKVHDAQILAPFVQLVTG 261
++PP+T +V++K H A+I F + G
Sbjct: 838 FRPPITYIVVQKRHHARIFCKFPNDMVG 865
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,825,021
Number of Sequences: 27780
Number of extensions: 356206
Number of successful extensions: 900
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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