Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0710
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical ... 144 4e-35
Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical pr... 114 5e-26
Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical p... 114 5e-26
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 29 2.5
AF077541-4|AAM19065.1| 625|Caenorhabditis elegans Alpha-catulin... 29 3.3
AF077541-3|AAM54172.1| 750|Caenorhabditis elegans Alpha-catulin... 29 3.3
AF077541-2|AAL77190.1| 759|Caenorhabditis elegans Alpha-catulin... 29 3.3
AF077541-1|AAL77189.1| 803|Caenorhabditis elegans Alpha-catulin... 29 3.3
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 7.7
U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical p... 28 7.7
>AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical
protein T22B11.5 protein.
Length = 1029
Score = 144 bits (350), Expect = 4e-35
Identities = 71/131 (54%), Positives = 91/131 (69%), Gaps = 4/131 (3%)
Frame = +1
Query: 244 GFRGGYSVTNPNALVLWEAQFGDFNNVAQCIIDQFISSGQAKWVRQSGIVLLQPHGMEGM 423
GF GYS+ +PN+LV+WEAQFGDF+N AQCIIDQFISSGQ+KW+RQSG+V+L PHG EGM
Sbjct: 727 GFELGYSMVDPNSLVIWEAQFGDFSNTAQCIIDQFISSGQSKWIRQSGLVMLLPHGYEGM 786
Query: 424 GPEHSSARLERFLQMCSDDPDYMPPESPAMKCVXFTTATGS*RTV----RLRRSYFXILR 591
GPEHSSAR ERFLQMC++D D + E A + + + + +LR
Sbjct: 787 GPEHSSARPERFLQMCNED-DEIDLEKIAFEGTFEAQQLHDTNWIVANCTTPANIYHLLR 845
Query: 592 RQIALPFPEAA 624
RQ+ +PF + A
Sbjct: 846 RQVTMPFRKPA 856
Score = 126 bits (305), Expect = 1e-29
Identities = 58/82 (70%), Positives = 66/82 (80%)
Frame = +2
Query: 8 NRTVDWALAEAMAYGSLLKEGIHVRLSGEDVERGTFSHRHHVLHHQKVDKATYCALAHLY 187
+ ++DWA EA+A+GSLLKEGIHVRLSG+DV+RGTFSHRHHVLH QKVD+ Y L L
Sbjct: 648 DNSLDWACGEALAFGSLLKEGIHVRLSGQDVQRGTFSHRHHVLHDQKVDQKIYNPLNDLS 707
Query: 188 PDQAPYTVCNSSLSEYGVLGFE 253
Q YTVCNSSLSEY VLGFE
Sbjct: 708 EGQGEYTVCNSSLSEYAVLGFE 729
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +2
Query: 608 PFRKPLILMTPKSLLRHPECKSSFDDMKEGXNFQ 709
PFRKP ++ +PKSLLRHP +S +D + G NFQ
Sbjct: 851 PFRKPAVVFSPKSLLRHPMARSPVEDFQSGSNFQ 884
Score = 38.3 bits (85), Expect = 0.005
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 510 YEVRXFHDCNWIVANCSTPAFVF 578
+E + HD NWIVANC+TPA ++
Sbjct: 819 FEAQQLHDTNWIVANCTTPANIY 841
>Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 114 bits (275), Expect = 5e-26
Identities = 54/119 (45%), Positives = 71/119 (59%)
Frame = +1
Query: 244 GFRGGYSVTNPNALVLWEAQFGDFNNVAQCIIDQFISSGQAKWVRQSGIVLLQPHGMEGM 423
GF G+S NP L +WEAQFGDF N AQ IID F++S ++KW+ SG+ +L PHG +G
Sbjct: 635 GFEWGFSSENPRRLCIWEAQFGDFFNGAQIIIDTFLASAESKWLTSSGLTMLLPHGFDGA 694
Query: 424 GPEHSSARLERFLQMCSDDPDYMPPESPAMKCVXFTTATGS*RTVRLRRSYFXILRRQI 600
GPEHSS R+ERFLQ+C D P + + T + YF +LRRQ+
Sbjct: 695 GPEHSSCRMERFLQLCDSREDQTPVDGENVNMRVANPTTSA--------QYFHLLRRQV 745
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +2
Query: 17 VDWALAEAMAYGSLLKEGIHVRLSGEDVERGTFSHRHHVLHHQKVDKATYCALAHLYPDQ 196
+DWA AEAMA+GS+L EG VR+SG+DV RGTF HRH ++ Q D + L L +Q
Sbjct: 559 IDWATAEAMAFGSILLEGNDVRISGQDVGRGTFCHRHAMMVDQSTDH-IHIPLNELVEEQ 617
Query: 197 A-PYTVCNSSLSEYGVLGFE 253
V N+ LSE +LGFE
Sbjct: 618 KNQLEVANNLLSEEAILGFE 637
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 596 RSLCP-FRKPLILMTPKSLLRHPECKSSFDDMKEGXNFQ 709
R + P +RKPLI++ PK LLRHP+ S+ ++ G +Q
Sbjct: 743 RQVVPNYRKPLIVVGPKILLRHPKAASTINEFGPGTTYQ 781
>Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 114 bits (275), Expect = 5e-26
Identities = 54/119 (45%), Positives = 71/119 (59%)
Frame = +1
Query: 244 GFRGGYSVTNPNALVLWEAQFGDFNNVAQCIIDQFISSGQAKWVRQSGIVLLQPHGMEGM 423
GF G+S NP L +WEAQFGDF N AQ IID F++S ++KW+ SG+ +L PHG +G
Sbjct: 635 GFEWGFSSENPRRLCIWEAQFGDFFNGAQIIIDTFLASAESKWLTSSGLTMLLPHGFDGA 694
Query: 424 GPEHSSARLERFLQMCSDDPDYMPPESPAMKCVXFTTATGS*RTVRLRRSYFXILRRQI 600
GPEHSS R+ERFLQ+C D P + + T + YF +LRRQ+
Sbjct: 695 GPEHSSCRMERFLQLCDSREDQTPVDGENVNMRVANPTTSA--------QYFHLLRRQV 745
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +2
Query: 17 VDWALAEAMAYGSLLKEGIHVRLSGEDVERGTFSHRHHVLHHQKVDKATYCALAHLYPDQ 196
+DWA AEAMA+GS+L EG VR+SG+DV RGTF HRH ++ Q D + L L +Q
Sbjct: 559 IDWATAEAMAFGSILLEGNDVRISGQDVGRGTFCHRHAMMVDQSTDH-IHIPLNELVEEQ 617
Query: 197 A-PYTVCNSSLSEYGVLGFE 253
V N+ LSE +LGFE
Sbjct: 618 KNQLEVANNLLSEEAILGFE 637
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 596 RSLCP-FRKPLILMTPKSLLRHPECKSSFDDMKEGXNFQ 709
R + P +RKPLI++ PK LLRHP+ S+ ++ G +Q
Sbjct: 743 RQVVPNYRKPLIVVGPKILLRHPKAASTINEFGPGTTYQ 781
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -1
Query: 487 SPGRRSTSARTSPNEPRSARGPSPPCREAAAVQSRTGAP 371
SP RR S SP R R SPP + QSR+ +P
Sbjct: 133 SPPRRQVSRSRSPPPRRQQRSRSPPPAKRRRDQSRSKSP 171
>AF077541-4|AAM19065.1| 625|Caenorhabditis elegans Alpha-catulin
(catenin/vinculinrelated) protein 1, isoform c protein.
Length = 625
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 542 DRSELFDSGVRISXFCVARSLCPFRKPLILMTPKSLLRHPECKSSFDDMKEGXNFQ 709
DR S R + +AR+ L+L K+ LRHP+C S+ ++G +Q
Sbjct: 194 DRQHDLKSEKRKAQMSIARTSLERLTMLLLTASKTYLRHPDCDSAL-QCRDGVFYQ 248
>AF077541-3|AAM54172.1| 750|Caenorhabditis elegans Alpha-catulin
(catenin/vinculinrelated) protein 1, isoform d protein.
Length = 750
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 542 DRSELFDSGVRISXFCVARSLCPFRKPLILMTPKSLLRHPECKSSFDDMKEGXNFQ 709
DR S R + +AR+ L+L K+ LRHP+C S+ ++G +Q
Sbjct: 194 DRQHDLKSEKRKAQMSIARTSLERLTMLLLTASKTYLRHPDCDSAL-QCRDGVFYQ 248
>AF077541-2|AAL77190.1| 759|Caenorhabditis elegans Alpha-catulin
(catenin/vinculinrelated) protein 1, isoform b protein.
Length = 759
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 542 DRSELFDSGVRISXFCVARSLCPFRKPLILMTPKSLLRHPECKSSFDDMKEGXNFQ 709
DR S R + +AR+ L+L K+ LRHP+C S+ ++G +Q
Sbjct: 194 DRQHDLKSEKRKAQMSIARTSLERLTMLLLTASKTYLRHPDCDSAL-QCRDGVFYQ 248
>AF077541-1|AAL77189.1| 803|Caenorhabditis elegans Alpha-catulin
(catenin/vinculinrelated) protein 1, isoform a protein.
Length = 803
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 542 DRSELFDSGVRISXFCVARSLCPFRKPLILMTPKSLLRHPECKSSFDDMKEGXNFQ 709
DR S R + +AR+ L+L K+ LRHP+C S+ ++G +Q
Sbjct: 194 DRQHDLKSEKRKAQMSIARTSLERLTMLLLTASKTYLRHPDCDSAL-QCRDGVFYQ 248
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = -1
Query: 505 GFPGACSP-GRRSTSARTSPNEPRS-----ARGPSPPCRE-AAAVQSRTGAPTWP 362
G PGA P G+ + TS NEP S GP+ P E AAA +S G P P
Sbjct: 160 GQPGAPGPNGQPGAAGTTSTNEPGSPGPAGPPGPAGPAGEDAAAPESPPGPPGPP 214
>Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical
protein F59F3.2 protein.
Length = 430
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +3
Query: 270 EPERPGXVGGPVRR-LQQRGPVHHRPVHLQ--RTGQVGAPVRDCTAAASRHGGDGPRALL 440
EP RPG G P R + G + R Q RTG G P +G GP+ L
Sbjct: 173 EPGRPGTPGDPGRPGTNEPGGIGARGPRGQSGRTGSKGDPGEAGQDFVQLNGLPGPKGLP 232
Query: 441 GSFG 452
GS G
Sbjct: 233 GSVG 236
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 102 STSSPERRTWMPSLSRDP*AIASASAQSTVRL 7
STSS R T PSL R P + AS++ T +
Sbjct: 266 STSSSSRTTTAPSLERKPVSFTVASSKPTTNI 297
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein
F36F2.3a protein.
Length = 1128
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 102 STSSPERRTWMPSLSRDP*AIASASAQSTVRL 7
STSS R T PSL R P + AS++ T +
Sbjct: 1031 STSSSSRTTTAPSLERKPVSFTVASSKPTTNI 1062
>U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical
protein C32E8.11 protein.
Length = 1927
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 634 HQDERLPERAERSGDAEXGNTNAGVEQFATIQLQS 530
H + L + + S D + NT+AGV QF +++ S
Sbjct: 1318 HSERSLLDLEKLSKDPDTANTSAGVLQFGAMEMSS 1352
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,463,723
Number of Sequences: 27780
Number of extensions: 400139
Number of successful extensions: 1507
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1503
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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