Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0706
(528 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 63 3e-11
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 60 2e-10
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 52 4e-08
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 44 1e-05
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 39 5e-04
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 35 0.007
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 33 0.020
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 31 0.11
SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 0.75
SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomy... 26 3.0
SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 26 4.0
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 25 5.3
SPCC1795.12c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 7.0
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 25 7.0
SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomy... 25 9.2
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 62.9 bits (146), Expect = 3e-11
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +2
Query: 266 VEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLNADYSS 445
++E V R+DI++T+KLW H V +A+ +LK L LDY+D YL+HWP+
Sbjct: 70 IKESGVPRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDK 129
Query: 446 FGRRLHGDL 472
F + G+L
Sbjct: 130 FPKDKDGNL 138
Score = 42.7 bits (96), Expect = 3e-05
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 78 NGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIXVGYRHFDTASVYETEQEIGE 251
+G +P +GLGT+ +S+ Q ++ V A+ GYRH D A++Y E E+G+
Sbjct: 20 DGSKIPGLGLGTW---------RSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGD 68
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 60.1 bits (139), Expect = 2e-10
Identities = 28/69 (40%), Positives = 39/69 (56%)
Frame = +2
Query: 266 VEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLNADYSS 445
+ E V R DI++T+KLW HR V A+ +L+ L L+YID YL+HWP L +
Sbjct: 69 IRESGVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLSGPEE 128
Query: 446 FGRRLHGDL 472
R G+L
Sbjct: 129 LPRNEKGEL 137
Score = 46.4 bits (105), Expect = 3e-06
Identities = 24/58 (41%), Positives = 34/58 (58%)
Frame = +3
Query: 78 NGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIXVGYRHFDTASVYETEQEIGE 251
NG +P+IGLGT+ +S + ++ V A+ GYRH DTA +Y E+EIGE
Sbjct: 19 NGDKIPSIGLGTW---------RSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGE 67
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 52.4 bits (120), Expect = 4e-08
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +2
Query: 266 VEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPI 421
++E V R +FIT+K+ H + +A+N+SL+KLG DY+DLYL+H PI
Sbjct: 64 LKEANVPRSKLFITSKV---MHNVDNIPEALNESLRKLGTDYLDLYLLHSPI 112
Score = 38.7 bits (86), Expect = 5e-04
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 90 MPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIXVGYRHFDTASVYETEQEIGEA 254
+PA G+GT L + G + ++ + D V A+ G+ H D A VY E+E+G A
Sbjct: 12 VPAYGVGTALFKKEKGEI---NRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVA 63
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 44.4 bits (100), Expect = 1e-05
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +2
Query: 266 VEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIG 424
+EE KREDI+ T+KL + ++ ++ +I+ S+K GL YIDL+L+H P G
Sbjct: 64 MEETGTKREDIWFTSKLNDLSGYKSTLS-SIDASVKACGLGYIDLFLLHSPYG 115
Score = 37.1 bits (82), Expect = 0.002
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +3
Query: 66 LKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIXVGYRHFDTASVYETEQEI 245
+K+NNG P G+Y+ V ++K D V A+ GYRH D+A +Y E +
Sbjct: 6 VKLNNGLKCPQFAYGSYM------VNRTK---CFDSVYAALQCGYRHIDSAQMYHNEADC 56
Query: 246 GEA 254
G A
Sbjct: 57 GRA 59
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 38.7 bits (86), Expect = 5e-04
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +2
Query: 269 EEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIG 424
E+ VKR DIF+T+KL N + A AI SL LG YIDL+L+ P G
Sbjct: 70 EKNNVKRTDIFLTSKLANCSDYYSTRA-AIRSSLHHLG-TYIDLFLIQSPAG 119
Score = 38.3 bits (85), Expect = 7e-04
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +3
Query: 45 STMEVPSLKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIXVGYRHFDTASV 224
S E ++ + NG +P IG G ++ K + +V +A+ GYRH DTA+V
Sbjct: 4 SQTESTTVTLTNGMVIPRIGFGAFM---------LKYNECYGLVTQALDSGYRHIDTAAV 54
Query: 225 YETEQEIGEA 254
Y E G+A
Sbjct: 55 YGNEDICGKA 64
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 35.1 bits (77), Expect = 0.007
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 TKLWNTQH-RRTEVAQAINDSLKKLGLDYIDLYLMHWP 418
TKL NT R + + +N SLK+LGL Y+D+ + H P
Sbjct: 102 TKLPNTTGLSRKHIIEGLNASLKRLGLPYVDVIMAHRP 139
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 33.5 bits (73), Expect = 0.020
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +2
Query: 281 VKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMH---WPI 421
+KREDI + TK+ ++ +A+ SL++ G +D+ L+H WP+
Sbjct: 67 IKREDITLITKIPDSLQGFERTWKAVEQSLRRTGRPKLDVVLIHSPKWPV 116
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 31.1 bits (67), Expect = 0.11
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 10/53 (18%)
Frame = +2
Query: 284 KREDIFITTKLWNTQHRRTE----------VAQAINDSLKKLGLDYIDLYLMH 412
+R++IF+ TK ++ T + +A++ SLK+LG+D IDLY +H
Sbjct: 74 RRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVH 126
>SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 390
Score = 28.3 bits (60), Expect = 0.75
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 308 TKLWNTQHRRTEVAQ-AINDSLKKLGLDYIDLYLMHW 415
+K + T +RR+E+ Q +++ KKL +D+Y +HW
Sbjct: 125 SKEYLTAYRRSELLQNKLHEYQKKLITRVLDMYQLHW 161
>SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 874
Score = 26.2 bits (55), Expect = 3.0
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 308 TKLWNTQHRRTEVAQAINDSLKKLGLDYID 397
TK+WN H+ E + ++D++++ L +D
Sbjct: 680 TKIWNCVHQLLEREKKMSDAMRQTKLTIVD 709
>SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 25.8 bits (54), Expect = 4.0
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 216 RYRNDGIRHXWRALQHHGAACPWTSLRRSDQ 124
RYRN ++ H G+ PW+S+ R ++
Sbjct: 113 RYRNGASVSRSSSIGHSGSTAPWSSVGRHNR 143
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 25.4 bits (53), Expect = 5.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 434 RHLIQWASASNKDLYNPDLVSSV 366
+HL +W S+S LY+P L S V
Sbjct: 1780 QHLARWISSSKSYLYSPLLSSHV 1802
>SPCC1795.12c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 112
Score = 25.0 bits (52), Expect = 7.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 318 HSLVVIKISSLLTTPSSTFIFRLLQFLVQF 229
H L+V ++ + T+ FIF L FL+ F
Sbjct: 72 HMLLVQRLKRVSTSSRRLFIFTLSMFLIAF 101
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 25.0 bits (52), Expect = 7.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 279 TPSSTFIFRLLQFLVQFRKRRRYRNDGI 196
+PSS I ++ + RK R+RN G+
Sbjct: 17 SPSSLVINEIITVVTAIRKTTRWRNSGV 44
>SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 654
Score = 24.6 bits (51), Expect = 9.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 325 PAPEN*SSPSYKRFTEETRSGLYRS 399
P PE SP Y F +++ S +Y S
Sbjct: 113 PPPEQLDSPCYPHFDQDSSSVIYPS 137
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,153,002
Number of Sequences: 5004
Number of extensions: 41911
Number of successful extensions: 118
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 216376042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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