Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0704
         (467 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0392 + 17131839-17131943,17134182-17134258,17134385-171344...    31   0.35 
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435...    29   1.9  
01_01_1115 + 8828544-8828620,8829608-8829779,8829873-8830183,883...    27   5.7  
10_08_0745 - 20260136-20260236,20260890-20260937,20261025-202611...    27   7.5  
10_01_0318 + 3493913-3496976,3497064-3497392                           27   10.0 
07_01_0853 + 6982185-6983593,6985926-6986497,6987139-6988439           27   10.0 

>11_04_0392 +
           17131839-17131943,17134182-17134258,17134385-17134411,
           17134512-17134634,17134738-17134981,17135081-17135098
          Length = 197

 Score = 31.5 bits (68), Expect = 0.35
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +1

Query: 49  ICTMEWMVPVNEMLRDEITRIDYNLMTDTFEGNIRTVR--MLQDSLSKLIDVLENIHQL 219
           +C   W+V  +  LR  + R+D+++ +    G IR ++   +Q  + KL  +L ++H L
Sbjct: 1   MCLPLWLVLPSASLRGLVPRVDFDMSSVASSGWIRVLQSGKVQKIMGKLWTILTHVHSL 59


>04_04_0179 - 23342764-23342973,23343185-23343340,23343535-23343593,
            23344150-23344226,23344309-23344587,23344800-23344885,
            23344960-23345027,23345721-23345904,23346071-23346204,
            23346776-23347039,23347613-23347677,23347833-23348407,
            23348501-23348680,23348765-23348928,23349008-23349261,
            23349405-23349562,23349808-23349948,23350176-23350282,
            23350651-23350737,23350812-23350901,23350974-23351055,
            23351370-23351561,23351748-23351816,23351959-23352294,
            23352694-23352837,23352963-23353126,23353817-23353883
          Length = 1463

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 383  CSLSSNKNRCLRPIFSMPTARLHRFLH 303
            CSL +  N CLR     PTAR+H ++H
Sbjct: 1365 CSLLAG-NCCLRLTLEDPTARIHAYIH 1390


>01_01_1115 +
           8828544-8828620,8829608-8829779,8829873-8830183,
           8830934-8830983,8832349-8832405,8832742-8832761,
           8834637-8835236,8835283-8836002
          Length = 668

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +2

Query: 242 HYWGKL-RLCPSHVVYILKDQDAKNGEG 322
           H W  L  +CP+H   +LKD D    EG
Sbjct: 185 HPWNMLCSVCPNHGAALLKDTDVGKDEG 212


>10_08_0745 -
           20260136-20260236,20260890-20260937,20261025-20261165,
           20261358-20261603,20261744-20262583,20263253-20263286
          Length = 469

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 387 HLFLVVEQKQVLATNLQHADCS 322
           H ++   QKQ+  TNLQ  +C+
Sbjct: 322 HSYIATRQKQIFVTNLQAINCA 343


>10_01_0318 + 3493913-3496976,3497064-3497392
          Length = 1130

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = -1

Query: 155 VLMFPSKVSVIKL*SMRVISSLNISFTGTIHSIVQISTNL*SFSL 21
           +L  P  +++ +L +M V+   N SF+G IHS +    NL + +L
Sbjct: 404 ILRGPVPLALWRLSNMAVLQLNNNSFSGEIHSDITQMRNLTNITL 448


>07_01_0853 + 6982185-6983593,6985926-6986497,6987139-6988439
          Length = 1093

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 254 KLRLCPSHVVYILKDQDAKNGEGE 325
           K RL PS+  Y L+ Q+AK  EG+
Sbjct: 368 KRRLAPSNYRYFLRGQNAKAKEGD 391


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,811,477
Number of Sequences: 37544
Number of extensions: 251616
Number of successful extensions: 604
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)