BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0704
(467 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061003-1|AAL28551.1| 461|Drosophila melanogaster HL01728p pro... 37 0.016
AE014296-1650|AAF50276.1| 291|Drosophila melanogaster CG3967-PB... 37 0.016
AE014296-1649|AAN11969.1| 461|Drosophila melanogaster CG3967-PE... 37 0.016
AE014296-1648|AAN11968.1| 461|Drosophila melanogaster CG3967-PD... 37 0.016
AE014296-1647|AAN11967.1| 461|Drosophila melanogaster CG3967-PC... 37 0.016
AE014296-1646|AAF50275.2| 461|Drosophila melanogaster CG3967-PA... 37 0.016
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 32 0.34
AY075251-1|AAL68118.1| 287|Drosophila melanogaster AT21637p pro... 29 2.4
AE014298-2954|AAF45373.1| 287|Drosophila melanogaster CG17003-P... 29 2.4
AY157937-1|AAN35199.1| 337|Drosophila melanogaster MSP-300 prot... 29 3.1
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB... 29 3.1
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P... 29 3.1
>AY061003-1|AAL28551.1| 461|Drosophila melanogaster HL01728p
protein.
Length = 461
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +1
Query: 58 MEWMVPVNEMLRDEITRIDYNLMTDTFEGNIRTVRMLQDSLSKLIDVLENIHQLHKASTV 237
+E+ + + I ++ NL+ +TF G+ R D+ SK+ ++++ + QL S
Sbjct: 2 VEFRFDIKPLFAQPIIKVTSNLLPNTFRGDRR---QCLDATSKMTEIIDQLGQLSATSQG 58
Query: 238 *SLLGKTSP---LPIACCVYP*RPGCXXXXXXAVGMLKIGRKHLFLFDDKEQVR 390
S T+ + +Y +G+LK+G K+L+LFD+ + R
Sbjct: 59 LSKPVTTAQRLRMSDNQTIYLLADNEAGHNGAVLGLLKVGTKNLYLFDEAGKTR 112
>AE014296-1650|AAF50276.1| 291|Drosophila melanogaster CG3967-PB,
isoform B protein.
Length = 291
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +1
Query: 58 MEWMVPVNEMLRDEITRIDYNLMTDTFEGNIRTVRMLQDSLSKLIDVLENIHQLHKASTV 237
+E+ + + I ++ NL+ +TF G+ R D+ SK+ ++++ + QL S
Sbjct: 2 VEFRFDIKPLFAQPIIKVTSNLLPNTFRGDRR---QCLDATSKMTEIIDQLGQLSATSQG 58
Query: 238 *SLLGKTSP---LPIACCVYP*RPGCXXXXXXAVGMLKIGRKHLFLFDDKEQVR 390
S T+ + +Y +G+LK+G K+L+LFD+ + R
Sbjct: 59 LSKPVTTAQRLRMSDNQTIYLLADNEAGHNGAVLGLLKVGTKNLYLFDEAGKTR 112
>AE014296-1649|AAN11969.1| 461|Drosophila melanogaster CG3967-PE,
isoform E protein.
Length = 461
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +1
Query: 58 MEWMVPVNEMLRDEITRIDYNLMTDTFEGNIRTVRMLQDSLSKLIDVLENIHQLHKASTV 237
+E+ + + I ++ NL+ +TF G+ R D+ SK+ ++++ + QL S
Sbjct: 2 VEFRFDIKPLFAQPIIKVTSNLLPNTFRGDRR---QCLDATSKMTEIIDQLGQLSATSQG 58
Query: 238 *SLLGKTSP---LPIACCVYP*RPGCXXXXXXAVGMLKIGRKHLFLFDDKEQVR 390
S T+ + +Y +G+LK+G K+L+LFD+ + R
Sbjct: 59 LSKPVTTAQRLRMSDNQTIYLLADNEAGHNGAVLGLLKVGTKNLYLFDEAGKTR 112
>AE014296-1648|AAN11968.1| 461|Drosophila melanogaster CG3967-PD,
isoform D protein.
Length = 461
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +1
Query: 58 MEWMVPVNEMLRDEITRIDYNLMTDTFEGNIRTVRMLQDSLSKLIDVLENIHQLHKASTV 237
+E+ + + I ++ NL+ +TF G+ R D+ SK+ ++++ + QL S
Sbjct: 2 VEFRFDIKPLFAQPIIKVTSNLLPNTFRGDRR---QCLDATSKMTEIIDQLGQLSATSQG 58
Query: 238 *SLLGKTSP---LPIACCVYP*RPGCXXXXXXAVGMLKIGRKHLFLFDDKEQVR 390
S T+ + +Y +G+LK+G K+L+LFD+ + R
Sbjct: 59 LSKPVTTAQRLRMSDNQTIYLLADNEAGHNGAVLGLLKVGTKNLYLFDEAGKTR 112
>AE014296-1647|AAN11967.1| 461|Drosophila melanogaster CG3967-PC,
isoform C protein.
Length = 461
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +1
Query: 58 MEWMVPVNEMLRDEITRIDYNLMTDTFEGNIRTVRMLQDSLSKLIDVLENIHQLHKASTV 237
+E+ + + I ++ NL+ +TF G+ R D+ SK+ ++++ + QL S
Sbjct: 2 VEFRFDIKPLFAQPIIKVTSNLLPNTFRGDRR---QCLDATSKMTEIIDQLGQLSATSQG 58
Query: 238 *SLLGKTSP---LPIACCVYP*RPGCXXXXXXAVGMLKIGRKHLFLFDDKEQVR 390
S T+ + +Y +G+LK+G K+L+LFD+ + R
Sbjct: 59 LSKPVTTAQRLRMSDNQTIYLLADNEAGHNGAVLGLLKVGTKNLYLFDEAGKTR 112
>AE014296-1646|AAF50275.2| 461|Drosophila melanogaster CG3967-PA,
isoform A protein.
Length = 461
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +1
Query: 58 MEWMVPVNEMLRDEITRIDYNLMTDTFEGNIRTVRMLQDSLSKLIDVLENIHQLHKASTV 237
+E+ + + I ++ NL+ +TF G+ R D+ SK+ ++++ + QL S
Sbjct: 2 VEFRFDIKPLFAQPIIKVTSNLLPNTFRGDRR---QCLDATSKMTEIIDQLGQLSATSQG 58
Query: 238 *SLLGKTSP---LPIACCVYP*RPGCXXXXXXAVGMLKIGRKHLFLFDDKEQVR 390
S T+ + +Y +G+LK+G K+L+LFD+ + R
Sbjct: 59 LSKPVTTAQRLRMSDNQTIYLLADNEAGHNGAVLGLLKVGTKNLYLFDEAGKTR 112
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 448 PVRWRLQTT*KSRTQSGSSCALVPCRRTKTGACDQSSACRLLAFTVFCI 302
P R + S + +C CR G C QS+ CR+L+ T C+
Sbjct: 14675 PPNCRPECVTSSECPTNQACIQQKCRDPCPGLCGQSAECRVLSHTPSCV 14723
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 415 SRTQSGSSCALVPCRRTKTGACDQSSACRLLAFTVFCI 302
S S +C CR G C S+ CR+++ T CI
Sbjct: 15343 SECPSNLACINQKCRDPCPGLCGSSATCRVVSHTAMCI 15380
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Frame = -2
Query: 403 SGSSCALVPCRRTKTGACDQSSACRLLAFTVFCILVFKDIHN-MRWAEAKFSPVVITRLR 227
S +C CR G+C Q++ C ++ T C I + R+ P+V +
Sbjct: 15452 SNRACQQQKCRDPCPGSCGQNAECNVVNHTPMCNCFAGFIGDPYRYCSQPPEPIVHEYVN 15511
Query: 226 PCAADEYSP-GHLSALTDYLVASSRS 152
PC P + + + V S RS
Sbjct: 15512 PCQPSPCGPNSNCREVNEQAVCSCRS 15537
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -2
Query: 436 RLQTT*KSRTQSGSSCALVPCRRTKTGACDQSSACRLLAFTVFCILV 296
R + T S S +C CR GAC Q++ C ++ T C +
Sbjct: 13727 RPECTINSECPSQLACINQKCRDPCPGACGQNAVCSVINHTPLCACI 13773
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = -2
Query: 448 PVRWRLQTT*KSRTQSGSSCALVPCRRTKTGACDQSSACRLLAFTVFCI 302
P R + + + S +C CR GAC Q + CR+++ C+
Sbjct: 15655 PPHCRPECSINAECPSHLACIGERCRDPCPGACGQQTECRVISHVPSCV 15703
>AY075251-1|AAL68118.1| 287|Drosophila melanogaster AT21637p
protein.
Length = 287
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +3
Query: 201 GEYSSAAQGLNRVITTGENFASAHRMLCISLKT----RMQKTVKASSRHAEDWSQAPVFV 368
G+ S+ AQGL +T+ + AS + ++ K + +K ++ + Q +
Sbjct: 57 GKLSADAQGLCHAVTSADKLASDQVVYLMADKAAGHWEITGLLKVGTKDLFVFDQGGCYR 116
Query: 369 RRQGTSAQLEPLCVLDFYVVCNRQRTGCGEETF 467
R T A +LDFYV +RQR G G+ F
Sbjct: 117 RLNQTPA------ILDFYVHESRQRCGQGKLLF 143
>AE014298-2954|AAF45373.1| 287|Drosophila melanogaster CG17003-PA
protein.
Length = 287
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +3
Query: 201 GEYSSAAQGLNRVITTGENFASAHRMLCISLKT----RMQKTVKASSRHAEDWSQAPVFV 368
G+ S+ AQGL +T+ + AS + ++ K + +K ++ + Q +
Sbjct: 57 GKLSADAQGLCHAVTSADKLASDQVVYLMADKAAGHWEITGLLKVGTKDLFVFDQGGCYR 116
Query: 369 RRQGTSAQLEPLCVLDFYVVCNRQRTGCGEETF 467
R T A +LDFYV +RQR G G+ F
Sbjct: 117 RLNQTPA------ILDFYVHESRQRCGQGKLLF 143
>AY157937-1|AAN35199.1| 337|Drosophila melanogaster MSP-300
protein.
Length = 337
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +1
Query: 58 MEWMVPVNEMLRDEITRIDYNLMTDTFEGNIRTVRMLQDSLSKLIDVLENIH 213
+E +N+ LRD+ ++ +L + E R + LQD L+ L + L+++H
Sbjct: 8 VEQQAKLNDTLRDKEQQVSKDL--EEIEQVFRRISQLQDKLNALHEQLQSVH 57
>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
isoform B protein.
Length = 7744
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +1
Query: 58 MEWMVPVNEMLRDEITRIDYNLMTDTFEGNIRTVRMLQDSLSKLIDVLENIH 213
+E +N+ LRD+ ++ +L + E R + LQD L+ L + L+++H
Sbjct: 7222 VEQQAKLNDTLRDKEQQVSKDL--EEIEQVFRRISQLQDKLNALHEQLQSVH 7271
>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
isoform D protein.
Length = 11707
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +1
Query: 58 MEWMVPVNEMLRDEITRIDYNLMTDTFEGNIRTVRMLQDSLSKLIDVLENIH 213
+E +N+ LRD+ ++ +L + E R + LQD L+ L + L+++H
Sbjct: 7222 VEQQAKLNDTLRDKEQQVSKDL--EEIEQVFRRISQLQDKLNALHEQLQSVH 7271
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,046,798
Number of Sequences: 53049
Number of extensions: 421715
Number of successful extensions: 1126
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -