Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0698
(718 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 100 1e-20
X16850-1|CAA34747.1| 396|Homo sapiens myoblast antigen 24.1D5 p... 100 1e-20
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 100 1e-20
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 100 1e-20
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 100 1e-20
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 97 4e-20
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 97 4e-20
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 97 4e-20
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 97 4e-20
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 97 4e-20
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 97 4e-20
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 97 4e-20
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 97 6e-20
L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA, com... 93 7e-19
Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein. 93 9e-19
U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55... 93 9e-19
U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein. 93 9e-19
CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein. 93 9e-19
BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containi... 93 9e-19
BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containi... 93 9e-19
BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containi... 93 9e-19
BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein. 93 9e-19
BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein. 93 9e-19
BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containi... 93 9e-19
BC037428-1|AAH37428.1| 606|Homo sapiens RAVER1 protein protein. 43 0.001
AB075858-1|BAB85564.1| 384|Homo sapiens KIAA1978 protein protein. 43 0.001
AL834505-1|CAD39162.1| 202|Homo sapiens hypothetical protein pr... 42 0.002
BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein. 41 0.004
AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar t... 41 0.004
AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar t... 41 0.004
BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating prote... 40 0.009
AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein iso... 40 0.009
AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding pro... 40 0.009
AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein. 40 0.009
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 40 0.012
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 40 0.012
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 40 0.012
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 40 0.012
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 40 0.012
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 40 0.012
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 40 0.012
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 40 0.012
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 40 0.012
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 39 0.021
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 39 0.021
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 39 0.021
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 39 0.021
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 39 0.021
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 39 0.021
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 39 0.021
BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein. 38 0.027
BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for IM... 38 0.027
BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein. 38 0.027
AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein. 38 0.027
AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein. 38 0.027
AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein. 38 0.027
AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein. 38 0.027
AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding, ... 38 0.027
AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein. 38 0.027
AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein. 38 0.027
AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding, ... 38 0.027
X66975-1|CAA47386.1| 557|Homo sapiens nuclear ribonucleoprotein... 38 0.047
X65372-1|CAA46444.1| 557|Homo sapiens polypirimidine tract bin... 38 0.047
X65371-1|CAA46443.1| 550|Homo sapiens polypirimidine tract bin... 38 0.047
X62006-1|CAA43973.1| 531|Homo sapiens polypirimidine tract bin... 38 0.047
X60648-1|CAA43056.1| 531|Homo sapiens polypyrimidine tract-bind... 38 0.047
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 38 0.047
BT006819-1|AAP35465.1| 557|Homo sapiens polypyrimidine tract bi... 38 0.047
BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein. 38 0.047
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 38 0.047
BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type a... 38 0.047
BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein. 38 0.047
BC013694-1|AAH13694.1| 557|Homo sapiens polypyrimidine tract bi... 38 0.047
BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein. 38 0.047
BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for IM... 38 0.047
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 38 0.047
BC004383-1|AAH04383.1| 531|Homo sapiens polypyrimidine tract bi... 38 0.047
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 38 0.047
BC002397-1|AAH02397.1| 557|Homo sapiens polypyrimidine tract bi... 38 0.047
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 38 0.047
AC006273-1|AAC99798.1| 531|Homo sapiens PTB_HUMAN protein. 38 0.047
AB208910-1|BAD92147.1| 329|Homo sapiens polypyrimidine tract-bi... 38 0.047
AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein. 38 0.047
CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein. 37 0.063
BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif prote... 37 0.063
BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif prote... 37 0.063
AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens ... 37 0.063
AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein. 37 0.063
AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2 pro... 37 0.063
AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding pro... 37 0.063
AL136097-15|CAI16208.1| 227|Homo sapiens nucleolar protein 8 pr... 37 0.083
AL136097-14|CAI16209.1| 205|Homo sapiens nucleolar protein 8 pr... 37 0.083
AL136097-13|CAC12712.1| 427|Homo sapiens nucleolar protein 8 pr... 37 0.083
AK001049-1|BAA91479.1| 427|Homo sapiens protein ( Homo sapiens ... 37 0.083
AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein. 37 0.083
AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant pr... 37 0.083
AB109030-1|BAC99315.1| 1167|Homo sapiens Nop132 protein. 37 0.083
AB105104-1|BAD12268.1| 1167|Homo sapiens nucleolar protein 8 pro... 37 0.083
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 36 0.11
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 36 0.11
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 36 0.11
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 36 0.11
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 36 0.14
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 36 0.14
U96074-1|AAC78728.1| 320|Homo sapiens translation initiation fa... 36 0.14
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 36 0.14
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 36 0.14
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 36 0.14
CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. 36 0.14
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 36 0.14
BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation ... 36 0.14
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 36 0.14
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 36 0.14
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 36 0.14
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 36 0.14
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 36 0.14
BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation ... 36 0.14
BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation ... 36 0.14
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 36 0.14
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 36 0.14
AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation ... 36 0.14
AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation ... 36 0.14
AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation ... 36 0.14
BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein. 36 0.19
AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein. 36 0.19
M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein. 35 0.33
D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein... 35 0.33
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 35 0.33
BC030025-1|AAH30025.1| 252|Homo sapiens TIAL1 protein protein. 35 0.33
BC016582-1|AAH16582.1| 532|Homo sapiens polypyrimidine tract bi... 35 0.33
AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7... 35 0.33
AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein. 35 0.33
AL357150-5|CAH70269.1| 531|Homo sapiens polypyrimidine tract bi... 35 0.33
AL357150-4|CAH70267.1| 537|Homo sapiens polypyrimidine tract bi... 35 0.33
AL357150-3|CAH70266.1| 536|Homo sapiens polypyrimidine tract bi... 35 0.33
AL357150-2|CAH70268.1| 532|Homo sapiens polypyrimidine tract bi... 35 0.33
AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA seq... 35 0.33
AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens ... 35 0.33
AF530581-1|AAM94625.1| 536|Homo sapiens non-neuronal splice var... 35 0.33
AF530580-1|AAM94624.1| 537|Homo sapiens non-neuronal splice var... 35 0.33
AF176085-1|AAF14284.1| 531|Homo sapiens neural polypyrimidine t... 35 0.33
AB209266-1|BAD92503.1| 177|Homo sapiens polypyrimidine tract bi... 35 0.33
AB209260-1|BAD92497.1| 183|Homo sapiens TIA1 cytotoxic granule-... 35 0.33
AB051233-1|BAB71743.1| 356|Homo sapiens PTB-like protein S prot... 35 0.33
AB051232-1|BAB71742.1| 532|Homo sapiens PTB-like protein L prot... 35 0.33
X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric ca... 34 0.44
U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c pr... 34 0.44
U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein. 34 0.44
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 34 0.44
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 34 0.44
U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein. 34 0.44
D59253-1|BAA09599.1| 156|Homo sapiens NCBP interacting protein ... 34 0.44
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 34 0.44
DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear r... 34 0.44
BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein pr... 34 0.44
BX537372-1|CAD97614.1| 119|Homo sapiens hypothetical protein pr... 34 0.44
BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding pro... 34 0.44
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 34 0.44
BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein. 34 0.44
BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein. 34 0.44
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 34 0.44
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 34 0.44
BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor, argini... 34 0.44
BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor, argini... 34 0.44
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 34 0.44
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 34 0.44
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 34 0.44
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 34 0.44
BC044585-1|AAH44585.1| 558|Homo sapiens ROD1 protein protein. 34 0.44
BC039896-1|AAH39896.1| 618|Homo sapiens Similar to ROD1 regulat... 34 0.44
BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein. 34 0.44
BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein. 34 0.44
BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding pro... 34 0.44
AY644767-1|AAV85455.1| 156|Homo sapiens cell proliferation-indu... 34 0.44
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 34 0.44
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 34 0.44
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 34 0.44
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 34 0.44
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 34 0.44
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 34 0.44
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 34 0.44
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 34 0.44
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 34 0.44
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 34 0.44
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 34 0.44
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 34 0.44
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 34 0.44
AL359073-2|CAI14113.1| 552|Homo sapiens ROD1 regulator of diffe... 34 0.44
AL359073-1|CAI14112.1| 183|Homo sapiens ROD1 regulator of diffe... 34 0.44
AL158824-8|CAI12353.1| 524|Homo sapiens ROD1 regulator of diffe... 34 0.44
AL158824-5|CAI12350.1| 552|Homo sapiens ROD1 regulator of diffe... 34 0.44
AL158824-4|CAI12349.1| 183|Homo sapiens ROD1 regulator of diffe... 34 0.44
AL157704-2|CAH70230.1| 490|Homo sapiens CUG triplet repeat, RNA... 34 0.44
AL157704-1|CAH70231.1| 498|Homo sapiens CUG triplet repeat, RNA... 34 0.44
AL136320-2|CAI20169.1| 490|Homo sapiens CUG triplet repeat, RNA... 34 0.44
AL136320-1|CAI20168.1| 498|Homo sapiens CUG triplet repeat, RNA... 34 0.44
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 34 0.44
AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear r... 34 0.44
AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear r... 34 0.44
AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor, argini... 34 0.44
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 34 0.44
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 34 0.44
AF432906-1|AAL27627.1| 488|Homo sapiens neuroblastoma apoptosis... 34 0.44
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 34 0.44
AF295068-3|AAK72223.1| 484|Homo sapiens neuroplastoma apoptosis... 34 0.44
AF295068-2|AAK92699.1| 490|Homo sapiens neuroplastoma apoptosis... 34 0.44
AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma apoptosis... 34 0.44
AF284423-1|AAG14457.1| 140|Homo sapiens RNA-binding protein BRU... 34 0.44
AF090693-1|AAD13760.1| 508|Homo sapiens apoptosis-related RNA b... 34 0.44
AF036956-1|AAD02074.1| 490|Homo sapiens neuroblastoma apoptosis... 34 0.44
AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear r... 34 0.44
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 34 0.44
AB023967-1|BAA75466.1| 521|Homo sapiens Rod1 protein. 34 0.44
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 34 0.58
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 34 0.58
BC004145-1|AAH04145.2| 291|Homo sapiens TNRC4 protein protein. 34 0.58
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 34 0.58
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 33 0.77
U69546-1|AAB09040.1| 490|Homo sapiens RNA-binding protein BRUNO... 33 0.77
U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. 33 0.77
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 33 0.77
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 33 0.77
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 33 0.77
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 33 0.77
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 33 0.77
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 33 0.77
BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA... 33 0.77
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 33 0.77
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 33 0.77
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 33 0.77
AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CU... 33 0.77
AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A i... 33 0.77
AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYL... 33 0.77
AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRU... 33 0.77
AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA b... 33 0.77
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 33 0.77
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 33 0.77
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 33 0.77
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 33 0.77
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 33 0.77
AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 33 0.77
D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA bind... 33 1.0
D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein. 33 1.0
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 33 1.0
CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein. 33 1.0
CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein. 33 1.0
CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein. 33 1.0
BC132973-1|AAI32974.1| 1023|Homo sapiens peroxisome proliferator... 33 1.0
BC132971-1|AAI32972.1| 1023|Homo sapiens peroxisome proliferator... 33 1.0
BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear r... 33 1.0
BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif prote... 33 1.0
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 33 1.0
BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA bindi... 33 1.0
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 33 1.0
BC026956-1|AAH26956.1| 741|Homo sapiens PPARGC1B protein protein. 33 1.0
BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif prote... 33 1.0
BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear r... 33 1.0
BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein. 33 1.0
AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor pro... 33 1.0
AY188950-1|AAO40025.1| 996|Homo sapiens peroxisome proliferator... 33 1.0
AY188949-1|AAO40024.1| 1002|Homo sapiens peroxisome proliferator... 33 1.0
AY188948-1|AAO40023.1| 1017|Homo sapiens peroxisome proliferator... 33 1.0
AY188947-1|AAO40022.1| 1023|Homo sapiens peroxisome proliferator... 33 1.0
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 33 1.0
AK095391-1|BAC04541.1| 1023|Homo sapiens protein ( Homo sapiens ... 33 1.0
AF468497-1|AAL78634.1| 984|Homo sapiens PGC-1-related estrogen ... 33 1.0
AF468496-1|AAL78633.1| 1023|Homo sapiens PGC-1-related estrogen ... 33 1.0
AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 33 1.0
AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like f... 33 1.0
AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14... 33 1.0
AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif prote... 33 1.0
AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif prote... 33 1.0
AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif prote... 33 1.0
AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein. 33 1.0
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 33 1.0
AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 33 1.0
AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein. 33 1.0
AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein. 33 1.0
AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein. 33 1.0
AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein. 33 1.0
AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein. 33 1.0
BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein. 33 1.4
AL357374-7|CAI13605.1| 336|Homo sapiens RNA binding motif prote... 33 1.4
BC047522-1|AAH47522.1| 402|Homo sapiens BRUNOL5 protein protein. 32 1.8
AB209067-1|BAD92304.1| 421|Homo sapiens bruno-like 5, RNA bindi... 32 1.8
X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for ... 31 3.1
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 31 3.1
AF248649-1|AAF86231.1| 83|Homo sapiens RNA-binding protein BRU... 31 3.1
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 31 4.1
U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein. 31 4.1
U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protei... 31 4.1
EF432052-1|ABO28524.1| 643|Homo sapiens candidate growth-relate... 31 4.1
D83032-1|BAA11748.1| 1978|Homo sapiens nuclear protein, NP220 pr... 31 4.1
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 31 4.1
BX537425-1|CAD97667.1| 1978|Homo sapiens hypothetical protein pr... 31 4.1
BC083513-1|AAH83513.1| 1957|Homo sapiens ZNF638 protein protein. 31 4.1
BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein. 31 4.1
BC024178-1|AAH24178.1| 643|Homo sapiens ENOX1 protein protein. 31 4.1
BC024000-1|AAH24000.1| 814|Homo sapiens ZNF638 protein protein. 31 4.1
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 31 4.1
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 31 4.1
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 31 4.1
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 31 4.1
AY513282-1|AAT08035.1| 643|Homo sapiens proliferation-inducing ... 31 4.1
AL627430-1|CAH72199.2| 643|Homo sapiens novel protein protein. 31 4.1
AL607148-1|CAH70584.2| 643|Homo sapiens novel protein protein. 31 4.1
AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,... 31 4.1
AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,... 31 4.1
AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,... 31 4.1
AL138823-2|CAI16283.2| 643|Homo sapiens novel protein protein. 31 4.1
AK000956-1|BAA91442.1| 643|Homo sapiens protein ( Homo sapiens ... 31 4.1
AF534078-1|AAM97681.1| 1139|Homo sapiens putative NP220 nuclear ... 31 4.1
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 31 4.1
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 31 4.1
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 31 4.1
AC007878-1|AAF66079.1| 792|Homo sapiens unknown protein. 31 4.1
AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,... 31 4.1
AB046799-1|BAB13405.1| 704|Homo sapiens KIAA1579 protein protein. 31 4.1
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 31 5.4
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 31 5.4
BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome proliferator... 31 5.4
BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein. 31 5.4
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 31 5.4
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 31 5.4
BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein. 31 5.4
AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion pro... 31 5.4
AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome proliferator... 31 5.4
AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome proliferator... 31 5.4
AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activa... 31 5.4
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 31 5.4
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 31 5.4
AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein. 31 5.4
AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein. 31 5.4
AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein. 31 5.4
AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein. 31 5.4
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 31 5.4
AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein. 31 5.4
M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternati... 30 9.5
M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternati... 30 9.5
M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein. 30 9.5
BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein. 30 9.5
BC019319-1|AAH19319.1| 190|Homo sapiens RNA binding motif prote... 30 9.5
BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor, argini... 30 9.5
BC008942-1|AAH08942.1| 190|Homo sapiens RNA binding motif prote... 30 9.5
AL162424-7|CAI14706.1| 190|Homo sapiens RNA binding motif prote... 30 9.5
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 30 9.5
AF186379-1|AAD56250.1| 798|Homo sapiens ligand effect modulator... 30 9.5
AF159714-1|AAD51615.1| 798|Homo sapiens PPAR gamma coactivator-... 30 9.5
AF108205-1|AAF19083.1| 798|Homo sapiens PPAR gamma coactivator-... 30 9.5
AF106698-1|AAF18573.1| 798|Homo sapiens PPAR gamma coactivator-... 30 9.5
AC092834-1|AAY41058.1| 798|Homo sapiens unknown protein. 30 9.5
AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor, argini... 30 9.5
AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein. 30 9.5
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 99.5 bits (237), Expect = 1e-20
Identities = 59/142 (41%), Positives = 80/142 (56%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD R LRVRFA H +A+ V+NL P+VSNELL +F FG IERA
Sbjct: 342 RALAEIAKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAV 401
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNVSS*HHPYAQSLLKALKNPMXSMDILK 614
V VD+RG++ G+G+VEFA KP+A F + V +++ L+ + D L
Sbjct: 402 VIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQ-LDDEDGLP 460
Query: 615 RIFPRNIQNFTKARELGPRFSE 680
+ + K RE PRF++
Sbjct: 461 EKLAQKNPMYQKERETPPRFAQ 482
Score = 62.9 bits (146), Expect = 1e-09
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +1
Query: 46 KLKDLQGPLFDLPPMEQ-SEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNK 222
K+ D +G +L + + E + R RL++GNL D+TE+E ++F+ +GE E+F+NK
Sbjct: 271 KISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITEDEFKRLFAKYGEPGEVFINK 330
Query: 223 EKNFGFIKMD 252
K FGFIK++
Sbjct: 331 GKGFGFIKLE 340
>X16850-1|CAA34747.1| 396|Homo sapiens myoblast antigen 24.1D5
protein.
Length = 396
Score = 99.5 bits (237), Expect = 1e-20
Identities = 59/142 (41%), Positives = 80/142 (56%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD R LRVRFA H +A+ V+NL P+VSNELL +F FG IERA
Sbjct: 31 RALAEIAKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAV 90
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNVSS*HHPYAQSLLKALKNPMXSMDILK 614
V VD+RG++ G+G+VEFA KP+A F + V +++ L+ + D L
Sbjct: 91 VIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQ-LDDEDGLP 149
Query: 615 RIFPRNIQNFTKARELGPRFSE 680
+ + K RE PRF++
Sbjct: 150 EKLAQKNPMYQKERETPPRFAQ 171
Score = 38.7 bits (86), Expect = 0.021
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +1
Query: 166 EIMKMFSPFGEASELFLNKEKNFGFIKMD 252
E ++F+ +GE E+F+NK K FGFIK++
Sbjct: 1 EFKRLFAKYGEPGEVFINKGKGFGFIKLE 29
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 99.5 bits (237), Expect = 1e-20
Identities = 59/142 (41%), Positives = 80/142 (56%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD R LRVRFA H +A+ V+NL P+VSNELL +F FG IERA
Sbjct: 342 RALAEIAKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAV 401
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNVSS*HHPYAQSLLKALKNPMXSMDILK 614
V VD+RG++ G+G+VEFA KP+A F + V +++ L+ + D L
Sbjct: 402 VIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQ-LDDEDGLP 460
Query: 615 RIFPRNIQNFTKARELGPRFSE 680
+ + K RE PRF++
Sbjct: 461 EKLAQKNPMYQKERETPPRFAQ 482
Score = 62.9 bits (146), Expect = 1e-09
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +1
Query: 46 KLKDLQGPLFDLPPMEQ-SEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNK 222
K+ D +G +L + + E + R RL++GNL D+TE+E ++F+ +GE E+F+NK
Sbjct: 271 KISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITEDEFKRLFAKYGEPGEVFINK 330
Query: 223 EKNFGFIKMD 252
K FGFIK++
Sbjct: 331 GKGFGFIKLE 340
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 99.5 bits (237), Expect = 1e-20
Identities = 59/142 (41%), Positives = 80/142 (56%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD R LRVRFA H +A+ V+NL P+VSNELL +F FG IERA
Sbjct: 269 RALAEIAKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAV 328
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNVSS*HHPYAQSLLKALKNPMXSMDILK 614
V VD+RG++ G+G+VEFA KP+A F + V +++ L+ + D L
Sbjct: 329 VIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQ-LDDEDGLP 387
Query: 615 RIFPRNIQNFTKARELGPRFSE 680
+ + K RE PRF++
Sbjct: 388 EKLAQKNPMYQKERETPPRFAQ 409
Score = 62.9 bits (146), Expect = 1e-09
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +1
Query: 46 KLKDLQGPLFDLPPMEQ-SEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNK 222
K+ D +G +L + + E + R RL++GNL D+TE+E ++F+ +GE E+F+NK
Sbjct: 198 KISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITEDEFKRLFAKYGEPGEVFINK 257
Query: 223 EKNFGFIKMD 252
K FGFIK++
Sbjct: 258 GKGFGFIKLE 267
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 99.5 bits (237), Expect = 1e-20
Identities = 59/142 (41%), Positives = 80/142 (56%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD R LRVRFA H +A+ V+NL P+VSNELL +F FG IERA
Sbjct: 342 RALAEIAKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAV 401
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNVSS*HHPYAQSLLKALKNPMXSMDILK 614
V VD+RG++ G+G+VEFA KP+A F + V +++ L+ + D L
Sbjct: 402 VIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQ-LDDEDGLP 460
Query: 615 RIFPRNIQNFTKARELGPRFSE 680
+ + K RE PRF++
Sbjct: 461 EKLAQKNPMYQKERETPPRFAQ 482
Score = 62.9 bits (146), Expect = 1e-09
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +1
Query: 46 KLKDLQGPLFDLPPMEQ-SEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNK 222
K+ D +G +L + + E + R RL++GNL D+TE+E ++F+ +GE E+F+NK
Sbjct: 271 KISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITEDEFKRLFAKYGEPGEVFINK 330
Query: 223 EKNFGFIKMD 252
K FGFIK++
Sbjct: 331 GKGFGFIKLE 340
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 97.5 bits (232), Expect = 4e-20
Identities = 48/83 (57%), Positives = 59/83 (71%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELDG + SR LR+RFA H +A+ VKNL P VSNELL ++F FG +E+A
Sbjct: 91 RTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAV 150
Query: 435 VKVDERGKTLGEGVVEFARKPSA 503
V VD+RG+ G+G VEFA KP A
Sbjct: 151 VVVDDRGRATGKGFVEFAAKPPA 173
Score = 61.7 bits (143), Expect = 3e-09
Identities = 22/55 (40%), Positives = 40/55 (72%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
++ E + R RL++GNL D+TEE+ ++F +GE SE+F+N+++ FGFI+++
Sbjct: 35 LKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLE 89
Score = 41.9 bits (94), Expect = 0.002
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C + F LT++ RPVIVE E+ D DG PEK L QK ++++
Sbjct: 176 ALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEK-LMQKTQQYHK 221
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 97.5 bits (232), Expect = 4e-20
Identities = 48/83 (57%), Positives = 59/83 (71%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELDG + SR LR+RFA H +A+ VKNL P VSNELL ++F FG +E+A
Sbjct: 127 RTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAV 186
Query: 435 VKVDERGKTLGEGVVEFARKPSA 503
V VD+RG+ G+G VEFA KP A
Sbjct: 187 VVVDDRGRATGKGFVEFAAKPPA 209
Score = 61.7 bits (143), Expect = 3e-09
Identities = 22/55 (40%), Positives = 40/55 (72%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
++ E + R RL++GNL D+TEE+ ++F +GE SE+F+N+++ FGFI+++
Sbjct: 71 LKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLE 125
Score = 41.9 bits (94), Expect = 0.002
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C + F LT++ RPVIVE E+ D DG PEK L QK ++++
Sbjct: 212 ALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEK-LMQKTQQYHK 257
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 97.5 bits (232), Expect = 4e-20
Identities = 48/83 (57%), Positives = 59/83 (71%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELDG + SR LR+RFA H +A+ VKNL P VSNELL ++F FG +E+A
Sbjct: 127 RTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAV 186
Query: 435 VKVDERGKTLGEGVVEFARKPSA 503
V VD+RG+ G+G VEFA KP A
Sbjct: 187 VVVDDRGRATGKGFVEFAAKPPA 209
Score = 61.7 bits (143), Expect = 3e-09
Identities = 22/55 (40%), Positives = 40/55 (72%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
++ E + R RL++GNL D+TEE+ ++F +GE SE+F+N+++ FGFI+++
Sbjct: 71 LKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLE 125
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEK 616
A+ C + F LT++ RPVIVE E+ D DG PEK
Sbjct: 212 ALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEK 247
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 97.5 bits (232), Expect = 4e-20
Identities = 48/83 (57%), Positives = 59/83 (71%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELDG + SR LR+RFA H +A+ VKNL P VSNELL ++F FG +E+A
Sbjct: 127 RTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAV 186
Query: 435 VKVDERGKTLGEGVVEFARKPSA 503
V VD+RG+ G+G VEFA KP A
Sbjct: 187 VVVDDRGRATGKGFVEFAAKPPA 209
Score = 61.7 bits (143), Expect = 3e-09
Identities = 22/55 (40%), Positives = 40/55 (72%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
++ E + R RL++GNL D+TEE+ ++F +GE SE+F+N+++ FGFI+++
Sbjct: 71 LKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLE 125
Score = 41.9 bits (94), Expect = 0.002
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C + F LT++ RPVIVE E+ D DG PEK L QK ++++
Sbjct: 212 ALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEK-LMQKTQQYHK 257
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 97.5 bits (232), Expect = 4e-20
Identities = 48/83 (57%), Positives = 59/83 (71%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELDG + SR LR+RFA H +A+ VKNL P VSNELL ++F FG +E+A
Sbjct: 91 RTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAV 150
Query: 435 VKVDERGKTLGEGVVEFARKPSA 503
V VD+RG+ G+G VEFA KP A
Sbjct: 151 VVVDDRGRATGKGFVEFAAKPPA 173
Score = 61.7 bits (143), Expect = 3e-09
Identities = 22/55 (40%), Positives = 40/55 (72%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
++ E + R RL++GNL D+TEE+ ++F +GE SE+F+N+++ FGFI+++
Sbjct: 35 LKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLE 89
Score = 41.9 bits (94), Expect = 0.002
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C + F LT++ RPVIVE E+ D DG PEK L QK ++++
Sbjct: 176 ALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEK-LMQKTQQYHK 221
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 97.5 bits (232), Expect = 4e-20
Identities = 48/83 (57%), Positives = 59/83 (71%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELDG + SR LR+RFA H +A+ VKNL P VSNELL ++F FG +E+A
Sbjct: 127 RTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAV 186
Query: 435 VKVDERGKTLGEGVVEFARKPSA 503
V VD+RG+ G+G VEFA KP A
Sbjct: 187 VVVDDRGRATGKGFVEFAAKPPA 209
Score = 61.7 bits (143), Expect = 3e-09
Identities = 22/55 (40%), Positives = 40/55 (72%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
++ E + R RL++GNL D+TEE+ ++F +GE SE+F+N+++ FGFI+++
Sbjct: 71 LKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLE 125
Score = 41.9 bits (94), Expect = 0.002
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C + F LT++ RPVIVE E+ D DG PEK L QK ++++
Sbjct: 212 ALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEK-LMQKTQQYHK 257
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 97.5 bits (232), Expect = 4e-20
Identities = 48/83 (57%), Positives = 59/83 (71%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELDG + SR LR+RFA H +A+ VKNL P VSNELL ++F FG +E+A
Sbjct: 127 RTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAV 186
Query: 435 VKVDERGKTLGEGVVEFARKPSA 503
V VD+RG+ G+G VEFA KP A
Sbjct: 187 VVVDDRGRATGKGFVEFAAKPPA 209
Score = 61.7 bits (143), Expect = 3e-09
Identities = 22/55 (40%), Positives = 40/55 (72%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
++ E + R RL++GNL D+TEE+ ++F +GE SE+F+N+++ FGFI+++
Sbjct: 71 LKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLE 125
Score = 41.9 bits (94), Expect = 0.002
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C + F LT++ RPVIVE E+ D DG PEK L QK ++++
Sbjct: 212 ALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEK-LMQKTQQYHK 257
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 97.1 bits (231), Expect = 6e-20
Identities = 50/94 (53%), Positives = 62/94 (65%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD R LRVRFA H +A+ V+NL P+VSNELL +F FG IERA
Sbjct: 342 RALAEIAKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAV 401
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNV 536
V VD+RG++ G+G+VEFA KP+A F + V
Sbjct: 402 VIVDDRGRSTGKGIVEFASKPAARKAFERCSEGV 435
Score = 62.9 bits (146), Expect = 1e-09
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +1
Query: 46 KLKDLQGPLFDLPPMEQ-SEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNK 222
K+ D +G +L + + E + R RL++GNL D+TE+E ++F+ +GE E+F+NK
Sbjct: 271 KISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITEDEFKRLFAKYGEPGEVFINK 330
Query: 223 EKNFGFIKMD 252
K FGFIK++
Sbjct: 331 GKGFGFIKLE 340
Score = 46.8 bits (106), Expect = 8e-05
Identities = 28/70 (40%), Positives = 36/70 (51%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYESS*AWTTFLRV*I 688
A C+E F LT++ RPVIVE E+ D DG PEK L QK+P + + T F +
Sbjct: 427 AFERCSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEK-LAQKNPMYQKERETPTRFAQHGT 485
Query: 689 VSNLIWTRWK 718
RWK
Sbjct: 486 FEYEYSQRWK 495
>L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA,
complete cds. ).
Length = 471
Score = 93.5 bits (222), Expect = 7e-19
Identities = 58/146 (39%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD + LRVRFA H++++ V+NLP +VSNELL +F +FG++ERA
Sbjct: 119 RTLAEIAKVELDNMPLRGKQLRVRFACHSASLHVRNLPQYVSNELLEEAFSVFGQVERAV 178
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNVSS*HHPYAQSLLKALKNPMXSMD--- 605
V VD+RG+ G+G+VEF+ KP+A A S PM +D
Sbjct: 179 VIVDDRGRPSGKGIVEFSGKPAARK----ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEE 234
Query: 606 -ILKRIFPRNIQNFTKARELGPRFSE 680
+ +++ +N Q F K RE PRF++
Sbjct: 235 GLPEKLVIKN-QQFHKEREQPPRFAQ 259
Score = 66.1 bits (154), Expect = 1e-10
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 QGPLFDLPPMEQ-SEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
+G DL + E F RSRL++GNL D+TEEE+ K+F +G+A E+F++K+K FG
Sbjct: 53 EGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFG 112
Query: 238 FIKMD 252
FI+++
Sbjct: 113 FIRLE 117
Score = 36.7 bits (81), Expect = 0.083
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C+E F LT+ RPV VE ++ D +G PEK L K+ +F++
Sbjct: 204 ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHK 249
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 246 NGLRVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIE 425
NG + +++ +D L+N R + S + V NLPP ++ E + + FE +GK
Sbjct: 44 NGQQASSQNEGLTID--LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAG 101
Query: 426 RAYVKVDE 449
++ D+
Sbjct: 102 EVFIHKDK 109
>Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein.
Length = 471
Score = 93.1 bits (221), Expect = 9e-19
Identities = 58/146 (39%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD + LRVRFA H++++ V+NLP +VSNELL +F +FG++ERA
Sbjct: 119 RTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAV 178
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNVSS*HHPYAQSLLKALKNPMXSMD--- 605
V VD+RG+ G+G+VEF+ KP+A A S PM +D
Sbjct: 179 VIVDDRGRPSGKGIVEFSGKPAARK----ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEE 234
Query: 606 -ILKRIFPRNIQNFTKARELGPRFSE 680
+ +++ +N Q F K RE PRF++
Sbjct: 235 GLPEKLVIKN-QQFHKEREQPPRFAQ 259
Score = 66.1 bits (154), Expect = 1e-10
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 QGPLFDLPPMEQ-SEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
+G DL + E F RSRL++GNL D+TEEE+ K+F +G+A E+F++K+K FG
Sbjct: 53 EGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFG 112
Query: 238 FIKMD 252
FI+++
Sbjct: 113 FIRLE 117
Score = 36.7 bits (81), Expect = 0.083
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C+E F LT+ RPV VE ++ D +G PEK L K+ +F++
Sbjct: 204 ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHK 249
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 246 NGLRVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIE 425
NG + +++ +D L+N R + S + V NLPP ++ E + + FE +GK
Sbjct: 44 NGQQASSQNEGLTID--LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAG 101
Query: 426 RAYVKVDE 449
++ D+
Sbjct: 102 EVFIHKDK 109
>U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55
protein.
Length = 471
Score = 93.1 bits (221), Expect = 9e-19
Identities = 58/146 (39%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD + LRVRFA H++++ V+NLP +VSNELL +F +FG++ERA
Sbjct: 119 RTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAV 178
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNVSS*HHPYAQSLLKALKNPMXSMD--- 605
V VD+RG+ G+G+VEF+ KP+A A S PM +D
Sbjct: 179 VIVDDRGRPSGKGIVEFSGKPAARK----ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEE 234
Query: 606 -ILKRIFPRNIQNFTKARELGPRFSE 680
+ +++ +N Q F K RE PRF++
Sbjct: 235 GLPEKLVIKN-QQFHKEREQPPRFAQ 259
Score = 66.1 bits (154), Expect = 1e-10
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 QGPLFDLPPMEQ-SEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
+G DL + E F RSRL++GNL D+TEEE+ K+F +G+A E+F++K+K FG
Sbjct: 53 EGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFG 112
Query: 238 FIKMD 252
FI+++
Sbjct: 113 FIRLE 117
Score = 36.7 bits (81), Expect = 0.083
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C+E F LT+ RPV VE ++ D +G PEK L K+ +F++
Sbjct: 204 ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHK 249
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 246 NGLRVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIE 425
NG + +++ +D L+N R + S + V NLPP ++ E + + FE +GK
Sbjct: 44 NGQQASSQNEGLTID--LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAG 101
Query: 426 RAYVKVDE 449
++ D+
Sbjct: 102 EVFIHKDK 109
>U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein.
Length = 471
Score = 93.1 bits (221), Expect = 9e-19
Identities = 58/146 (39%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD + LRVRFA H++++ V+NLP +VSNELL +F +FG++ERA
Sbjct: 119 RTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAV 178
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNVSS*HHPYAQSLLKALKNPMXSMD--- 605
V VD+RG+ G+G+VEF+ KP+A A S PM +D
Sbjct: 179 VIVDDRGRPSGKGIVEFSGKPAARK----ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEE 234
Query: 606 -ILKRIFPRNIQNFTKARELGPRFSE 680
+ +++ +N Q F K RE PRF++
Sbjct: 235 GLPEKLVIKN-QQFHKEREQPPRFAQ 259
Score = 66.1 bits (154), Expect = 1e-10
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 QGPLFDLPPMEQ-SEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
+G DL + E F RSRL++GNL D+TEEE+ K+F +G+A E+F++K+K FG
Sbjct: 53 EGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFG 112
Query: 238 FIKMD 252
FI+++
Sbjct: 113 FIRLE 117
Score = 36.7 bits (81), Expect = 0.083
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C+E F LT+ RPV VE ++ D +G PEK L K+ +F++
Sbjct: 204 ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHK 249
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 246 NGLRVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIE 425
NG + +++ +D L+N R + S + V NLPP ++ E + + FE +GK
Sbjct: 44 NGQQASSQNEGLTID--LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAG 101
Query: 426 RAYVKVDE 449
++ D+
Sbjct: 102 EVFIHKDK 109
>CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein.
Length = 471
Score = 93.1 bits (221), Expect = 9e-19
Identities = 58/146 (39%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD + LRVRFA H++++ V+NLP +VSNELL +F +FG++ERA
Sbjct: 119 RTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAV 178
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNVSS*HHPYAQSLLKALKNPMXSMD--- 605
V VD+RG+ G+G+VEF+ KP+A A S PM +D
Sbjct: 179 VIVDDRGRPSGKGIVEFSGKPAARK----ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEE 234
Query: 606 -ILKRIFPRNIQNFTKARELGPRFSE 680
+ +++ +N Q F K RE PRF++
Sbjct: 235 GLPEKLVIKN-QQFHKEREQPPRFAQ 259
Score = 66.1 bits (154), Expect = 1e-10
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 QGPLFDLPPMEQ-SEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
+G DL + E F RSRL++GNL D+TEEE+ K+F +G+A E+F++K+K FG
Sbjct: 53 EGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFG 112
Query: 238 FIKMD 252
FI+++
Sbjct: 113 FIRLE 117
Score = 36.7 bits (81), Expect = 0.083
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C+E F LT+ RPV VE ++ D +G PEK L K+ +F++
Sbjct: 204 ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHK 249
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 246 NGLRVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIE 425
NG + +++ +D L+N R + S + V NLPP ++ E + + FE +GK
Sbjct: 44 NGQQASSQNEGLTID--LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAG 101
Query: 426 RAYVKVDE 449
++ D+
Sbjct: 102 EVFIHKDK 109
>BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 93.1 bits (221), Expect = 9e-19
Identities = 58/146 (39%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD + LRVRFA H++++ V+NLP +VSNELL +F +FG++ERA
Sbjct: 119 RTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAV 178
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNVSS*HHPYAQSLLKALKNPMXSMD--- 605
V VD+RG+ G+G+VEF+ KP+A A S PM +D
Sbjct: 179 VIVDDRGRPSGKGIVEFSGKPAARK----ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEE 234
Query: 606 -ILKRIFPRNIQNFTKARELGPRFSE 680
+ +++ +N Q F K RE PRF++
Sbjct: 235 GLPEKLVIKN-QQFHKEREQPPRFAQ 259
Score = 66.1 bits (154), Expect = 1e-10
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 QGPLFDLPPMEQ-SEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
+G DL + E F RSRL++GNL D+TEEE+ K+F +G+A E+F++K+K FG
Sbjct: 53 EGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFG 112
Query: 238 FIKMD 252
FI+++
Sbjct: 113 FIRLE 117
Score = 36.7 bits (81), Expect = 0.083
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C+E F LT+ RPV VE ++ D +G PEK L K+ +F++
Sbjct: 204 ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHK 249
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 246 NGLRVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIE 425
NG + +++ +D L+N R + S + V NLPP ++ E + + FE +GK
Sbjct: 44 NGQQASSQNEGLTID--LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAG 101
Query: 426 RAYVKVDE 449
++ D+
Sbjct: 102 EVFIHKDK 109
>BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 93.1 bits (221), Expect = 9e-19
Identities = 58/146 (39%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD + LRVRFA H++++ V+NLP +VSNELL +F +FG++ERA
Sbjct: 119 RTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAV 178
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNVSS*HHPYAQSLLKALKNPMXSMD--- 605
V VD+RG+ G+G+VEF+ KP+A A S PM +D
Sbjct: 179 VIVDDRGRPSGKGIVEFSGKPAARK----ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEE 234
Query: 606 -ILKRIFPRNIQNFTKARELGPRFSE 680
+ +++ +N Q F K RE PRF++
Sbjct: 235 GLPEKLVIKN-QQFHKEREQPPRFAQ 259
Score = 66.1 bits (154), Expect = 1e-10
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 QGPLFDLPPMEQ-SEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
+G DL + E F RSRL++GNL D+TEEE+ K+F +G+A E+F++K+K FG
Sbjct: 53 EGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFG 112
Query: 238 FIKMD 252
FI+++
Sbjct: 113 FIRLE 117
Score = 36.7 bits (81), Expect = 0.083
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C+E F LT+ RPV VE ++ D +G PEK L K+ +F++
Sbjct: 204 ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHK 249
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 246 NGLRVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIE 425
NG + +++ +D L+N R + S + V NLPP ++ E + + FE +GK
Sbjct: 44 NGQQASSQNEGLTID--LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAG 101
Query: 426 RAYVKVDE 449
++ D+
Sbjct: 102 EVFIHKDK 109
>BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 93.1 bits (221), Expect = 9e-19
Identities = 58/146 (39%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD + LRVRFA H++++ V+NLP +VSNELL +F +FG++ERA
Sbjct: 119 RTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAV 178
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNVSS*HHPYAQSLLKALKNPMXSMD--- 605
V VD+RG+ G+G+VEF+ KP+A A S PM +D
Sbjct: 179 VIVDDRGRPSGKGIVEFSGKPAARK----ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEE 234
Query: 606 -ILKRIFPRNIQNFTKARELGPRFSE 680
+ +++ +N Q F K RE PRF++
Sbjct: 235 GLPEKLVIKN-QQFHKEREQPPRFAQ 259
Score = 66.1 bits (154), Expect = 1e-10
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 QGPLFDLPPMEQ-SEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
+G DL + E F RSRL++GNL D+TEEE+ K+F +G+A E+F++K+K FG
Sbjct: 53 EGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFG 112
Query: 238 FIKMD 252
FI+++
Sbjct: 113 FIRLE 117
Score = 36.7 bits (81), Expect = 0.083
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C+E F LT+ RPV VE ++ D +G PEK L K+ +F++
Sbjct: 204 ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHK 249
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 246 NGLRVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIE 425
NG + +++ +D L+N R + S + V NLPP ++ E + + FE +GK
Sbjct: 44 NGQQASSQNEGLTID--LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAG 101
Query: 426 RAYVKVDE 449
++ D+
Sbjct: 102 EVFIHKDK 109
>BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 93.1 bits (221), Expect = 9e-19
Identities = 58/146 (39%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD + LRVRFA H++++ V+NLP +VSNELL +F +FG++ERA
Sbjct: 119 RTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAV 178
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNVSS*HHPYAQSLLKALKNPMXSMD--- 605
V VD+RG+ G+G+VEF+ KP+A A S PM +D
Sbjct: 179 VIVDDRGRPSGKGIVEFSGKPAARK----ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEE 234
Query: 606 -ILKRIFPRNIQNFTKARELGPRFSE 680
+ +++ +N Q F K RE PRF++
Sbjct: 235 GLPEKLVIKN-QQFHKEREQPPRFAQ 259
Score = 66.1 bits (154), Expect = 1e-10
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 QGPLFDLPPMEQ-SEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
+G DL + E F RSRL++GNL D+TEEE+ K+F +G+A E+F++K+K FG
Sbjct: 53 EGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFG 112
Query: 238 FIKMD 252
FI+++
Sbjct: 113 FIRLE 117
Score = 36.7 bits (81), Expect = 0.083
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C+E F LT+ RPV VE ++ D +G PEK L K+ +F++
Sbjct: 204 ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHK 249
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 246 NGLRVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIE 425
NG + +++ +D L+N R + S + V NLPP ++ E + + FE +GK
Sbjct: 44 NGQQASSQNEGLTID--LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAG 101
Query: 426 RAYVKVDE 449
++ D+
Sbjct: 102 EVFIHKDK 109
>BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 93.1 bits (221), Expect = 9e-19
Identities = 58/146 (39%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD + LRVRFA H++++ V+NLP +VSNELL +F +FG++ERA
Sbjct: 119 RTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAV 178
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNVSS*HHPYAQSLLKALKNPMXSMD--- 605
V VD+RG+ G+G+VEF+ KP+A A S PM +D
Sbjct: 179 VIVDDRGRPSGKGIVEFSGKPAARK----ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEE 234
Query: 606 -ILKRIFPRNIQNFTKARELGPRFSE 680
+ +++ +N Q F K RE PRF++
Sbjct: 235 GLPEKLVIKN-QQFHKEREQPPRFAQ 259
Score = 66.1 bits (154), Expect = 1e-10
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 QGPLFDLPPMEQ-SEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
+G DL + E F RSRL++GNL D+TEEE+ K+F +G+A E+F++K+K FG
Sbjct: 53 EGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFG 112
Query: 238 FIKMD 252
FI+++
Sbjct: 113 FIRLE 117
Score = 36.7 bits (81), Expect = 0.083
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C+E F LT+ RPV VE ++ D +G PEK L K+ +F++
Sbjct: 204 ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHK 249
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 246 NGLRVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIE 425
NG + +++ +D L+N R + S + V NLPP ++ E + + FE +GK
Sbjct: 44 NGQQASSQNEGLTID--LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAG 101
Query: 426 RAYVKVDE 449
++ D+
Sbjct: 102 EVFIHKDK 109
>BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 93.1 bits (221), Expect = 9e-19
Identities = 58/146 (39%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Frame = +3
Query: 255 RVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAY 434
R AE AK ELD + LRVRFA H++++ V+NLP +VSNELL +F +FG++ERA
Sbjct: 119 RTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAV 178
Query: 435 VKVDERGKTLGEGVVEFARKPSALSQFVTAQKNVSS*HHPYAQSLLKALKNPMXSMD--- 605
V VD+RG+ G+G+VEF+ KP+A A S PM +D
Sbjct: 179 VIVDDRGRPSGKGIVEFSGKPAARK----ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEE 234
Query: 606 -ILKRIFPRNIQNFTKARELGPRFSE 680
+ +++ +N Q F K RE PRF++
Sbjct: 235 GLPEKLVIKN-QQFHKEREQPPRFAQ 259
Score = 66.1 bits (154), Expect = 1e-10
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 QGPLFDLPPMEQ-SEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
+G DL + E F RSRL++GNL D+TEEE+ K+F +G+A E+F++K+K FG
Sbjct: 53 EGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFG 112
Query: 238 FIKMD 252
FI+++
Sbjct: 113 FIRLE 117
Score = 36.7 bits (81), Expect = 0.083
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C+E F LT+ RPV VE ++ D +G PEK L K+ +F++
Sbjct: 204 ALDRCSEGSFLLTTFPRPVTVEPMDQLDDEEGLPEK-LVIKNQQFHK 249
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 246 NGLRVNAERAKRELDGKLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIE 425
NG + +++ +D L+N R + S + V NLPP ++ E + + FE +GK
Sbjct: 44 NGQQASSQNEGLTID--LKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAG 101
Query: 426 RAYVKVDE 449
++ D+
Sbjct: 102 EVFIHKDK 109
>BC037428-1|AAH37428.1| 606|Homo sapiens RAVER1 protein protein.
Length = 606
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Frame = +3
Query: 258 VNAERAKRELDG----KLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIE 425
+N E+A+ ++ +LR R L V+ P ++ + V NLPP ++ + FG +E
Sbjct: 101 LNGEQAEAAINAFHQSRLRE-RELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLE 159
Query: 426 RAYVKVDER-GKTLGEGVVEFARKPSA 503
R ++ ER G++ G G E+ +K SA
Sbjct: 160 RCFLVYSERTGQSKGYGFAEYMKKDSA 186
>AB075858-1|BAB85564.1| 384|Homo sapiens KIAA1978 protein protein.
Length = 384
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Frame = +3
Query: 258 VNAERAKRELDG----KLRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIE 425
+N E+A+ ++ +LR R L V+ P ++ + V NLPP ++ + FG +E
Sbjct: 22 LNGEQAEAAINAFHQSRLRE-RELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLE 80
Query: 426 RAYVKVDER-GKTLGEGVVEFARKPSA 503
R ++ ER G++ G G E+ +K SA
Sbjct: 81 RCFLVYSERTGQSKGYGFAEYMKKDSA 107
>AL834505-1|CAD39162.1| 202|Homo sapiens hypothetical protein
protein.
Length = 202
Score = 41.9 bits (94), Expect = 0.002
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 509 AIRNCTEKCFFLTSSLRPVIVESFEEPDXFDGYPEKNLPQKHPEFYE 649
A+ C + F LT++ RPVIVE E+ D DG PEK L QK ++++
Sbjct: 21 ALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEK-LMQKTQQYHK 66
>BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein.
Length = 243
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = +3
Query: 258 VNAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIF 413
V+A+RA L+ + R +R+ ++ + ++R +KNL + N+ LY F F
Sbjct: 97 VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAF 156
Query: 414 GKIERAYVKVDERGKTLGEGVVEFARKPSA 503
G I V DE+G G G V F ++ SA
Sbjct: 157 GNILSCKVACDEKGPK-GYGFVHFQKQESA 185
>AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340530)
protein.
Length = 200
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = +3
Query: 258 VNAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIF 413
V+A+RA L+ + R +R+ ++ + ++R +KNL + N+ LY F F
Sbjct: 54 VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAF 113
Query: 414 GKIERAYVKVDERGKTLGEGVVEFARKPSA 503
G I V DE+G G G V F ++ SA
Sbjct: 114 GNILSCKVACDEKGPK-GYGFVHFQKQESA 142
>AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340529)
protein.
Length = 200
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = +3
Query: 258 VNAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIF 413
V+A+RA L+ + R +R+ ++ + ++R +KNL + N+ LY F F
Sbjct: 54 VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAF 113
Query: 414 GKIERAYVKVDERGKTLGEGVVEFARKPSA 503
G I V DE+G G G V F ++ SA
Sbjct: 114 GNILSCKVACDEKGPK-GYGFVHFQKQESA 142
>BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 2 protein.
Length = 449
Score = 39.9 bits (89), Expect = 0.009
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +1
Query: 103 VKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLN------KEKNFGFIKMD 252
+++ +L++GNL +D+ E E+ + F FG EL +N K NFGF+ D
Sbjct: 292 IRYPDSHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFD 347
>AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein
isoform G3BP-2a protein.
Length = 482
Score = 39.9 bits (89), Expect = 0.009
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +1
Query: 103 VKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLN------KEKNFGFIKMD 252
+++ +L++GNL +D+ E E+ + F FG EL +N K NFGF+ D
Sbjct: 325 IRYPDSHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFD 380
>AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding
protein G3BP2 protein.
Length = 449
Score = 39.9 bits (89), Expect = 0.009
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +1
Query: 103 VKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLN------KEKNFGFIKMD 252
+++ +L++GNL +D+ E E+ + F FG EL +N K NFGF+ D
Sbjct: 292 IRYPDSHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFD 347
>AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein.
Length = 490
Score = 39.9 bits (89), Expect = 0.009
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +1
Query: 103 VKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLN------KEKNFGFIKMD 252
+++ +L++GNL +D+ E E+ + F FG EL +N K NFGF+ D
Sbjct: 333 IRYPDSHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFD 388
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 39.5 bits (88), Expect = 0.012
Identities = 17/56 (30%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 79 LPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKE-KNFGFI 243
LP +QS+ + ++++G T D+TE+E+ + FS +G+ ++F+ K + F F+
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 39.5 bits (88), Expect = 0.012
Identities = 17/56 (30%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 79 LPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKE-KNFGFI 243
LP +QS+ + ++++G T D+TE+E+ + FS +G+ ++F+ K + F F+
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 39.5 bits (88), Expect = 0.012
Identities = 17/56 (30%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 79 LPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKE-KNFGFI 243
LP +QS+ + ++++G T D+TE+E+ + FS +G+ ++F+ K + F F+
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 39.5 bits (88), Expect = 0.012
Identities = 17/56 (30%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 79 LPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKE-KNFGFI 243
LP +QS+ + ++++G T D+TE+E+ + FS +G+ ++F+ K + F F+
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 39.5 bits (88), Expect = 0.012
Identities = 17/56 (30%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 79 LPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKE-KNFGFI 243
LP +QS+ + ++++G T D+TE+E+ + FS +G+ ++F+ K + F F+
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 39.5 bits (88), Expect = 0.012
Identities = 17/56 (30%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 79 LPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKE-KNFGFI 243
LP +QS+ + ++++G T D+TE+E+ + FS +G+ ++F+ K + F F+
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein
protein.
Length = 295
Score = 39.5 bits (88), Expect = 0.012
Identities = 17/56 (30%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 79 LPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKE-KNFGFI 243
LP +QS+ + ++++G T D+TE+E+ + FS +G+ ++F+ K + F F+
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 39.5 bits (88), Expect = 0.012
Identities = 17/56 (30%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 79 LPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKE-KNFGFI 243
LP +QS+ + ++++G T D+TE+E+ + FS +G+ ++F+ K + F F+
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein
variant protein.
Length = 414
Score = 39.5 bits (88), Expect = 0.012
Identities = 17/56 (30%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 79 LPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKE-KNFGFI 243
LP +QS+ + ++++G T D+TE+E+ + FS +G+ ++F+ K + F F+
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 38.7 bits (86), Expect = 0.021
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K A E +L K L G + D P + +K + ++++G L + TEE+I + F
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVID--PKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGE 176
Query: 190 FG--EASEL----FLNKEKNFGFI 243
FG EA EL LNK + F FI
Sbjct: 177 FGEIEAIELPMDPKLNKRRGFVFI 200
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 38.7 bits (86), Expect = 0.021
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K A E +L K L G + D P + +K + ++++G L + TEE+I + F
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVID--PKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGE 176
Query: 190 FG--EASEL----FLNKEKNFGFI 243
FG EA EL LNK + F FI
Sbjct: 177 FGEIEAIELPMDPKLNKRRGFVFI 200
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 38.7 bits (86), Expect = 0.021
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K A E +L K L G + D P + +K + ++++G L + TEE+I + F
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVID--PKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGE 176
Query: 190 FG--EASEL----FLNKEKNFGFI 243
FG EA EL LNK + F FI
Sbjct: 177 FGEIEAIELPMDPKLNKRRGFVFI 200
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 38.7 bits (86), Expect = 0.021
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K A E +L K L G + D P + +K + ++++G L + TEE+I + F
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVID--PKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGE 176
Query: 190 FG--EASEL----FLNKEKNFGFI 243
FG EA EL LNK + F FI
Sbjct: 177 FGEIEAIELPMDPKLNKRRGFVFI 200
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 38.7 bits (86), Expect = 0.021
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K A E +L K L G + D P + +K + ++++G L + TEE+I + F
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVID--PKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGE 176
Query: 190 FG--EASEL----FLNKEKNFGFI 243
FG EA EL LNK + F FI
Sbjct: 177 FGEIEAIELPMDPKLNKRRGFVFI 200
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 38.7 bits (86), Expect = 0.021
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K A E +L K L G + D P + +K + ++++G L + TEE+I + F
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVID--PKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGE 176
Query: 190 FG--EASEL----FLNKEKNFGFI 243
FG EA EL LNK + F FI
Sbjct: 177 FGEIEAIELPMDPKLNKRRGFVFI 200
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 38.7 bits (86), Expect = 0.021
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K A E +L K L G + D P + +K + ++++G L + TEE+I + F
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVID--PKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGE 176
Query: 190 FG--EASEL----FLNKEKNFGFI 243
FG EA EL LNK + F FI
Sbjct: 177 FGEIEAIELPMDPKLNKRRGFVFI 200
>BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein.
Length = 410
Score = 38.3 bits (85), Expect = 0.027
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLK--DLQGPLFDLPPMEQSEVKFNGRSR-LYIGNLTNDVTEEEI 171
D+ AQ ++S K+K G + P+E + + + + L++ NL N VTEE +
Sbjct: 143 DHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEIL 202
Query: 172 MKMFSPFGEASELFLNKEKNFGFIKMD 252
K FS FG+ + K K++ FI D
Sbjct: 203 EKAFSQFGKLER--VKKLKDYAFIHFD 227
>BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for
IMAGE:4079825) protein.
Length = 453
Score = 38.3 bits (85), Expect = 0.027
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLK--DLQGPLFDLPPMEQSEVKFNGRSR-LYIGNLTNDVTEEEI 171
D+ AQ ++S K+K G + P+E + + + + L++ NL N VTEE +
Sbjct: 331 DHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEIL 390
Query: 172 MKMFSPFGEASELFLNKEKNFGFIKMD 252
K FS FG+ + K K++ FI D
Sbjct: 391 EKAFSQFGKLER--VKKLKDYAFIHFD 415
>BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein.
Length = 417
Score = 38.3 bits (85), Expect = 0.027
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLK--DLQGPLFDLPPMEQSEVKFNGRSR-LYIGNLTNDVTEEEI 171
D+ AQ ++S K+K G + P+E + + + + L++ NL N VTEE +
Sbjct: 295 DHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEIL 354
Query: 172 MKMFSPFGEASELFLNKEKNFGFIKMD 252
K FS FG+ + K K++ FI D
Sbjct: 355 EKAFSQFGKLER--VKKLKDYAFIHFD 379
>AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein.
Length = 561
Score = 38.3 bits (85), Expect = 0.027
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLK--DLQGPLFDLPPMEQSEVKFNGRSR-LYIGNLTNDVTEEEI 171
D+ AQ ++S K+K G + P+E + + + + L++ NL N VTEE +
Sbjct: 295 DHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEIL 354
Query: 172 MKMFSPFGEASELFLNKEKNFGFIKMD 252
K FS FG+ + K K++ FI D
Sbjct: 355 EKAFSQFGKLER--VKKLKDYAFIHFD 379
>AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein.
Length = 623
Score = 38.3 bits (85), Expect = 0.027
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLK--DLQGPLFDLPPMEQSEVKFNGRSR-LYIGNLTNDVTEEEI 171
D+ AQ ++S K+K G + P+E + + + + L++ NL N VTEE +
Sbjct: 295 DHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEIL 354
Query: 172 MKMFSPFGEASELFLNKEKNFGFIKMD 252
K FS FG+ + K K++ FI D
Sbjct: 355 EKAFSQFGKLER--VKKLKDYAFIHFD 379
>AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein.
Length = 623
Score = 38.3 bits (85), Expect = 0.027
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLK--DLQGPLFDLPPMEQSEVKFNGRSR-LYIGNLTNDVTEEEI 171
D+ AQ ++S K+K G + P+E + + + + L++ NL N VTEE +
Sbjct: 295 DHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEIL 354
Query: 172 MKMFSPFGEASELFLNKEKNFGFIKMD 252
K FS FG+ + K K++ FI D
Sbjct: 355 EKAFSQFGKLER--VKKLKDYAFIHFD 379
>AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein.
Length = 562
Score = 38.3 bits (85), Expect = 0.027
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLK--DLQGPLFDLPPMEQSEVKFNGRSR-LYIGNLTNDVTEEEI 171
D+ AQ ++S K+K G + P+E + + + + L++ NL N VTEE +
Sbjct: 295 DHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEIL 354
Query: 172 MKMFSPFGEASELFLNKEKNFGFIKMD 252
K FS FG+ + K K++ FI D
Sbjct: 355 EKAFSQFGKLER--VKKLKDYAFIHFD 379
>AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 623
Score = 38.3 bits (85), Expect = 0.027
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLK--DLQGPLFDLPPMEQSEVKFNGRSR-LYIGNLTNDVTEEEI 171
D+ AQ ++S K+K G + P+E + + + + L++ NL N VTEE +
Sbjct: 295 DHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEIL 354
Query: 172 MKMFSPFGEASELFLNKEKNFGFIKMD 252
K FS FG+ + K K++ FI D
Sbjct: 355 EKAFSQFGKLER--VKKLKDYAFIHFD 379
>AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein.
Length = 562
Score = 38.3 bits (85), Expect = 0.027
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLK--DLQGPLFDLPPMEQSEVKFNGRSR-LYIGNLTNDVTEEEI 171
D+ AQ ++S K+K G + P+E + + + + L++ NL N VTEE +
Sbjct: 295 DHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEIL 354
Query: 172 MKMFSPFGEASELFLNKEKNFGFIKMD 252
K FS FG+ + K K++ FI D
Sbjct: 355 EKAFSQFGKLER--VKKLKDYAFIHFD 379
>AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein.
Length = 623
Score = 38.3 bits (85), Expect = 0.027
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLK--DLQGPLFDLPPMEQSEVKFNGRSR-LYIGNLTNDVTEEEI 171
D+ AQ ++S K+K G + P+E + + + + L++ NL N VTEE +
Sbjct: 295 DHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEIL 354
Query: 172 MKMFSPFGEASELFLNKEKNFGFIKMD 252
K FS FG+ + K K++ FI D
Sbjct: 355 EKAFSQFGKLER--VKKLKDYAFIHFD 379
>AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 534
Score = 38.3 bits (85), Expect = 0.027
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLK--DLQGPLFDLPPMEQSEVKFNGRSR-LYIGNLTNDVTEEEI 171
D+ AQ ++S K+K G + P+E + + + + L++ NL N VTEE +
Sbjct: 267 DHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEIL 326
Query: 172 MKMFSPFGEASELFLNKEKNFGFIKMD 252
K FS FG+ + K K++ FI D
Sbjct: 327 EKAFSQFGKLER--VKKLKDYAFIHFD 351
>X66975-1|CAA47386.1| 557|Homo sapiens nuclear ribonucleoprotein
protein.
Length = 557
Score = 37.5 bits (83), Expect = 0.047
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD*E 258
++I L DVTE E++ + PFG+ + L + K KN FI+M+ E
Sbjct: 61 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>X65372-1|CAA46444.1| 557|Homo sapiens polypirimidine tract
binding protein protein.
Length = 557
Score = 37.5 bits (83), Expect = 0.047
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD*E 258
++I L DVTE E++ + PFG+ + L + K KN FI+M+ E
Sbjct: 61 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>X65371-1|CAA46443.1| 550|Homo sapiens polypirimidine tract
binding protein protein.
Length = 550
Score = 37.5 bits (83), Expect = 0.047
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD*E 258
++I L DVTE E++ + PFG+ + L + K KN FI+M+ E
Sbjct: 61 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>X62006-1|CAA43973.1| 531|Homo sapiens polypirimidine tract
binding protein protein.
Length = 531
Score = 37.5 bits (83), Expect = 0.047
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD*E 258
++I L DVTE E++ + PFG+ + L + K KN FI+M+ E
Sbjct: 61 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>X60648-1|CAA43056.1| 531|Homo sapiens polypyrimidine tract-binding
protein (pPTB) protein.
Length = 531
Score = 37.5 bits (83), Expect = 0.047
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD*E 258
++I L DVTE E++ + PFG+ + L + K KN FI+M+ E
Sbjct: 61 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 37.5 bits (83), Expect = 0.047
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
+L+IGNL + TE+EI +F +G+ E + KN+GF+ ++
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDI--IKNYGFVHIE 43
>BT006819-1|AAP35465.1| 557|Homo sapiens polypyrimidine tract
binding protein 1 protein.
Length = 557
Score = 37.5 bits (83), Expect = 0.047
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD*E 258
++I L DVTE E++ + PFG+ + L + K KN FI+M+ E
Sbjct: 61 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein.
Length = 143
Score = 37.5 bits (83), Expect = 0.047
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
+L+IGNL + TE+EI +F +G+ E + KN+GF+ ++
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDI--IKNYGFVHIE 43
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 37.5 bits (83), Expect = 0.047
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
+L+IGNL + TE+EI +F +G+ E + KN+GF+ ++
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDI--IKNYGFVHIE 43
>BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type and
RNA binding motif 1 protein.
Length = 217
Score = 37.5 bits (83), Expect = 0.047
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 330 APHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSA 503
AP S V V NLP ++N LYR F +GK+ + + D + K+ G + F K SA
Sbjct: 6 APSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSA 64
>BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein.
Length = 177
Score = 37.5 bits (83), Expect = 0.047
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
+L+IGNL + TE+EI +F +G+ E + KN+GF+ ++
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDI--IKNYGFVHIE 43
>BC013694-1|AAH13694.1| 557|Homo sapiens polypyrimidine tract
binding protein 1 protein.
Length = 557
Score = 37.5 bits (83), Expect = 0.047
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD*E 258
++I L DVTE E++ + PFG+ + L + K KN FI+M+ E
Sbjct: 61 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein.
Length = 140
Score = 37.5 bits (83), Expect = 0.047
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 330 APHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSA 503
AP S V V NLP ++N LYR F +GK+ + + D + K+ G + F K SA
Sbjct: 6 APSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSA 64
>BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for
IMAGE:3609027) protein.
Length = 141
Score = 37.5 bits (83), Expect = 0.047
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 330 APHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSA 503
AP S V V NLP ++N LYR F +GK+ + + D + K+ G + F K SA
Sbjct: 6 APSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSA 64
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 37.5 bits (83), Expect = 0.047
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
+L+IGNL + TE+EI +F +G+ E + KN+GF+ ++
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDI--IKNYGFVHIE 43
>BC004383-1|AAH04383.1| 531|Homo sapiens polypyrimidine tract
binding protein 1 protein.
Length = 531
Score = 37.5 bits (83), Expect = 0.047
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD*E 258
++I L DVTE E++ + PFG+ + L + K KN FI+M+ E
Sbjct: 61 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 37.5 bits (83), Expect = 0.047
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
+L+IGNL + TE+EI +F +G+ E + KN+GF+ ++
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDI--IKNYGFVHIE 43
>BC002397-1|AAH02397.1| 557|Homo sapiens polypyrimidine tract
binding protein 1 protein.
Length = 557
Score = 37.5 bits (83), Expect = 0.047
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD*E 258
++I L DVTE E++ + PFG+ + L + K KN FI+M+ E
Sbjct: 61 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 37.5 bits (83), Expect = 0.047
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
+L+IGNL + TE+EI +F +G+ E + KN+GF+ ++
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDI--IKNYGFVHIE 43
>AC006273-1|AAC99798.1| 531|Homo sapiens PTB_HUMAN protein.
Length = 531
Score = 37.5 bits (83), Expect = 0.047
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD*E 258
++I L DVTE E++ + PFG+ + L + K KN FI+M+ E
Sbjct: 61 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 104
>AB208910-1|BAD92147.1| 329|Homo sapiens polypyrimidine
tract-binding protein 1 isoform c variant protein.
Length = 329
Score = 37.5 bits (83), Expect = 0.047
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD*E 258
++I L DVTE E++ + PFG+ + L + K KN FI+M+ E
Sbjct: 78 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE 121
>AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein.
Length = 217
Score = 37.5 bits (83), Expect = 0.047
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 330 APHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSA 503
AP S V V NLP ++N LYR F +GK+ + + D + K+ G + F K SA
Sbjct: 6 APSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSA 64
>CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein.
Length = 423
Score = 37.1 bits (82), Expect = 0.063
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
G RLY+G+L ++TE+ + +F PFG+ + L K+ + G
Sbjct: 245 GPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTG 285
>BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif protein
23 protein.
Length = 423
Score = 37.1 bits (82), Expect = 0.063
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
G RLY+G+L ++TE+ + +F PFG+ + L K+ + G
Sbjct: 245 GPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTG 285
>BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif protein
23 protein.
Length = 424
Score = 37.1 bits (82), Expect = 0.063
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
G RLY+G+L ++TE+ + +F PFG+ + L K+ + G
Sbjct: 245 GPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTG 285
>AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ10482 fis, clone NT2RP2000153, weakly similar to
GAR2 PROTEIN. ).
Length = 406
Score = 37.1 bits (82), Expect = 0.063
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
G RLY+G+L ++TE+ + +F PFG+ + L K+ + G
Sbjct: 227 GPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTG 267
>AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.063
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
G RLY+G+L ++TE+ + +F PFG+ + L K+ + G
Sbjct: 239 GPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTG 279
>AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2
protein.
Length = 425
Score = 37.1 bits (82), Expect = 0.063
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
G RLY+G+L ++TE+ + +F PFG+ + L K+ + G
Sbjct: 245 GPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTG 285
>AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding
protein protein.
Length = 449
Score = 37.1 bits (82), Expect = 0.063
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +1
Query: 103 VKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLN------KEKNFGFIKMD 252
+++ +L++GNL +D+ E E+ + F FG L +N K NFGF+ D
Sbjct: 292 IRYPDSHQLFVGNLPHDIDENELKEFFMSFGNVVVLRINTKGVGGKLPNFGFVVFD 347
>AL136097-15|CAI16208.1| 227|Homo sapiens nucleolar protein 8
protein.
Length = 227
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKN 231
RLY+G L+ D++E ++ FS FGE S++ + K+
Sbjct: 9 RLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKD 44
>AL136097-14|CAI16209.1| 205|Homo sapiens nucleolar protein 8
protein.
Length = 205
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKN 231
RLY+G L+ D++E ++ FS FGE S++ + K+
Sbjct: 9 RLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKD 44
>AL136097-13|CAC12712.1| 427|Homo sapiens nucleolar protein 8
protein.
Length = 427
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKN 231
RLY+G L+ D++E ++ FS FGE S++ + K+
Sbjct: 9 RLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKD 44
>AK001049-1|BAA91479.1| 427|Homo sapiens protein ( Homo sapiens
cDNA FLJ10187 fis, clone HEMBA1004596. ).
Length = 427
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKN 231
RLY+G L+ D++E ++ FS FGE S++ + K+
Sbjct: 9 RLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKD 44
>AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein.
Length = 386
Score = 36.7 bits (81), Expect = 0.083
Identities = 13/42 (30%), Positives = 28/42 (66%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
+Y G +T+ +TE+ + + FSPFG+ E+ + +K + F++ +
Sbjct: 216 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFN 257
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFG 195
LY+GNL+ DVTE I+++FS G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIG 31
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEAS------ELFLNKEKNFGFI 243
+++G+L+ ++T E+I F+PFG S ++ K K +GF+
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 152
>AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant
protein.
Length = 464
Score = 36.7 bits (81), Expect = 0.083
Identities = 13/42 (30%), Positives = 28/42 (66%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
+Y G +T+ +TE+ + + FSPFG+ E+ + +K + F++ +
Sbjct: 295 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFN 336
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFG 195
LY+GNL+ DVTE I+++FS G
Sbjct: 47 LYVGNLSRDVTEALILQLFSQIG 69
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEAS------ELFLNKEKNFGFI 243
+++G+L+ ++T E+I F+PFG S ++ K K +GF+
Sbjct: 146 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 190
>AB109030-1|BAC99315.1| 1167|Homo sapiens Nop132 protein.
Length = 1167
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKN 231
RLY+G L+ D++E ++ FS FGE S++ + K+
Sbjct: 9 RLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKD 44
>AB105104-1|BAD12268.1| 1167|Homo sapiens nucleolar protein 8
protein.
Length = 1167
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKN 231
RLY+G L+ D++E ++ FS FGE S++ + K+
Sbjct: 9 RLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKD 44
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 36.3 bits (80), Expect = 0.11
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ ++ + +R+ ++ + +R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G G V F +A
Sbjct: 124 NILSCKVACDEHG-SRGFGFVHFETHEAA 151
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 36.3 bits (80), Expect = 0.11
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ ++ + +R+ ++ + +R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G G V F +A
Sbjct: 124 NILSCKVACDEHG-SRGFGFVHFETHEAA 151
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKE----KNFGFI 243
M+Q ++ LY+ NL + + ++++ K FSP+G + + E K FGF+
Sbjct: 283 MKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFV 338
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 36.3 bits (80), Expect = 0.11
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ ++ + +R+ ++ + +R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G G V F +A
Sbjct: 124 NILSCKVACDEHG-SRGFGFVHFETHEAA 151
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 36.3 bits (80), Expect = 0.11
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ ++ + +R+ ++ + +R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G G V F +A
Sbjct: 124 NILSCKVACDEHG-SRGFGFVHFETHEAA 151
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKE----KNFGFI 243
M+Q ++ LY+ NL + + ++++ K FSP+G + + E K FGF+
Sbjct: 283 MKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFV 338
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 35.9 bits (79), Expect = 0.14
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N+ LY +F FG
Sbjct: 39 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 98
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G G V F + +A
Sbjct: 99 NILSCKVVCDENG-SKGYGFVHFETQEAA 126
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFL----NKEKNFGFI 243
M+Q + LY+ NL + + +E + K FSPFG + + + K FGF+
Sbjct: 258 MKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFV 313
Score = 31.1 bits (67), Expect = 4.1
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Frame = +3
Query: 264 AERAKRELDGKLRNSRTLRV-RF-------------APHNSAVRVKNLPPFVSNELLYRS 401
AERA +++G L N R + V RF A + V +KN + +E L
Sbjct: 126 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 185
Query: 402 FEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
F FG V DE GK+ G G V F R A
Sbjct: 186 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDA 219
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 35.9 bits (79), Expect = 0.14
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G G V F + +A
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAA 151
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFL----NKEKNFGFI 243
M+Q + LY+ NL + + +E + K FSPFG + + + K FGF+
Sbjct: 280 MKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFV 335
>U96074-1|AAC78728.1| 320|Homo sapiens translation initiation
factor eIF3 p44 subunit protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.14
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 94 QSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
Q + + + + + NL+ D E ++ ++F PFG S ++L K+K G
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTG 277
Score = 33.1 bits (72), Expect = 1.0
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 288 DGKLRNSRTLRV-RFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKT 461
DG R +++ R A N+ +RV NL L F FG I R Y+ D+ G++
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 462 LGEGVVEFARK 494
G + F R+
Sbjct: 280 KGFAFISFHRR 290
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 35.9 bits (79), Expect = 0.14
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G G V F + +A
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAA 151
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFL----NKEKNFGFI 243
M+Q + LY+ NL + + +E + K FSPFG + + + K FGF+
Sbjct: 283 MKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFV 338
Score = 31.1 bits (67), Expect = 4.1
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Frame = +3
Query: 264 AERAKRELDGKLRNSRTLRV-RF-------------APHNSAVRVKNLPPFVSNELLYRS 401
AERA +++G L N R + V RF A + V +KN + +E L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 402 FEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
F FG V DE GK+ G G V F R A
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDA 244
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 35.9 bits (79), Expect = 0.14
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFG--EASELFLNKE----KNFGFI 243
G RLY+G+L ++TE+ + +F PFG E+ +L ++ E K +GFI
Sbjct: 248 GPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.14
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFG--EASELFLNKE----KNFGFI 243
G RLY+G+L ++TE+ + +F PFG E+ +L ++ E K +GFI
Sbjct: 248 GPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296
>CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.14
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 94 QSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
Q + + + + + NL+ D E ++ ++F PFG S ++L K+K G
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTG 277
Score = 34.3 bits (75), Expect = 0.44
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 288 DGKLRNSRTLRV-RFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKT 461
DG R +++ R A N+ +RV NL L F FG I R Y+ D+ G++
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 462 LGEGVVEFARKPSA 503
G + F R+ A
Sbjct: 280 KGFAFISFHRREDA 293
>BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 35.9 bits (79), Expect = 0.14
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFG--EASELFLNKE----KNFGFI 243
G RLY+G+L ++TE+ + +F PFG E+ +L ++ E K +GFI
Sbjct: 91 GPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 139
>BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.14
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 94 QSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
Q + + + + + NL+ D E ++ ++F PFG S ++L K+K G
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTG 277
Score = 34.3 bits (75), Expect = 0.44
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 288 DGKLRNSRTLRV-RFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKT 461
DG R +++ R A N+ +RV NL L F FG I R Y+ D+ G++
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 462 LGEGVVEFARKPSA 503
G + F R+ A
Sbjct: 280 KGFAFISFHRREDA 293
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 35.9 bits (79), Expect = 0.14
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFG--EASELFLNKE----KNFGFI 243
G RLY+G+L ++TE+ + +F PFG E+ +L ++ E K +GFI
Sbjct: 248 GPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 35.9 bits (79), Expect = 0.14
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFG--EASELFLNKE----KNFGFI 243
G RLY+G+L ++TE+ + +F PFG E+ +L ++ E K +GFI
Sbjct: 226 GPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 274
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 35.9 bits (79), Expect = 0.14
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G G V F + +A
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAA 151
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFL----NKEKNFGFI 243
M+Q + LY+ NL + + +E + K FSPFG + + + K FGF+
Sbjct: 283 MKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFV 338
Score = 31.1 bits (67), Expect = 4.1
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Frame = +3
Query: 264 AERAKRELDGKLRNSRTLRV-RF-------------APHNSAVRVKNLPPFVSNELLYRS 401
AERA +++G L N R + V RF A + V +KN + +E L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 402 FEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
F FG V DE GK+ G G V F R A
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDA 244
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 35.9 bits (79), Expect = 0.14
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G G V F + +A
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAA 151
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFL----NKEKNFGFI 243
M+Q + LY+ NL + + +E + K FSPFG + + + K FGF+
Sbjct: 283 MKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFV 338
Score = 31.1 bits (67), Expect = 4.1
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Frame = +3
Query: 264 AERAKRELDGKLRNSRTLRV-RF-------------APHNSAVRVKNLPPFVSNELLYRS 401
AERA +++G L N R + V RF A + V +KN + +E L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 402 FEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
F FG V DE GK+ G G V F R A
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDA 244
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 35.9 bits (79), Expect = 0.14
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G G V F + +A
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAA 151
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFL----NKEKNFGFI 243
M+Q + LY+ NL + + +E + K FSPFG + + + K FGF+
Sbjct: 283 MKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFV 338
Score = 31.1 bits (67), Expect = 4.1
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Frame = +3
Query: 264 AERAKRELDGKLRNSRTLRV-RF-------------APHNSAVRVKNLPPFVSNELLYRS 401
AERA +++G L N R + V RF A + V +KN + +E L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 402 FEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
F FG V DE GK+ G G V F R A
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDA 244
>BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.14
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 94 QSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
Q + + + + + NL+ D E ++ ++F PFG S ++L K+K G
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTG 277
Score = 34.3 bits (75), Expect = 0.44
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 288 DGKLRNSRTLRV-RFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKT 461
DG R +++ R A N+ +RV NL L F FG I R Y+ D+ G++
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 462 LGEGVVEFARKPSA 503
G + F R+ A
Sbjct: 280 KGFAFISFHRREDA 293
>BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.14
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 94 QSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
Q + + + + + NL+ D E ++ ++F PFG S ++L K+K G
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTG 277
Score = 34.3 bits (75), Expect = 0.44
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 288 DGKLRNSRTLRV-RFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKT 461
DG R +++ R A N+ +RV NL L F FG I R Y+ D+ G++
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 462 LGEGVVEFARKPSA 503
G + F R+ A
Sbjct: 280 KGFAFISFHRREDA 293
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.14
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFG--EASELFLNKE----KNFGFI 243
G RLY+G+L ++TE+ + +F PFG E+ +L ++ E K +GFI
Sbjct: 248 GPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 35.9 bits (79), Expect = 0.14
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFG--EASELFLNKE----KNFGFI 243
G RLY+G+L ++TE+ + +F PFG E+ +L ++ E K +GFI
Sbjct: 248 GPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296
>AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.14
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 94 QSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
Q + + + + + NL+ D E ++ ++F PFG S ++L K+K G
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTG 277
Score = 34.3 bits (75), Expect = 0.44
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 288 DGKLRNSRTLRV-RFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKT 461
DG R +++ R A N+ +RV NL L F FG I R Y+ D+ G++
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 462 LGEGVVEFARKPSA 503
G + F R+ A
Sbjct: 280 KGFAFISFHRREDA 293
>AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.14
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 94 QSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
Q + + + + + NL+ D E ++ ++F PFG S ++L K+K G
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTG 277
Score = 34.3 bits (75), Expect = 0.44
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 288 DGKLRNSRTLRV-RFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKT 461
DG R +++ R A N+ +RV NL L F FG I R Y+ D+ G++
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 462 LGEGVVEFARKPSA 503
G + F R+ A
Sbjct: 280 KGFAFISFHRREDA 293
>AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.14
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 94 QSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFG 237
Q + + + + + NL+ D E ++ ++F PFG S ++L K+K G
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTG 277
Score = 34.3 bits (75), Expect = 0.44
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 288 DGKLRNSRTLRV-RFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDE-RGKT 461
DG R +++ R A N+ +RV NL L F FG I R Y+ D+ G++
Sbjct: 220 DGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 279
Query: 462 LGEGVVEFARKPSA 503
G + F R+ A
Sbjct: 280 KGFAFISFHRREDA 293
>BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein.
Length = 527
Score = 35.5 bits (78), Expect = 0.19
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
L++ NL N VTEE + K FS FG+ + K K++ FI D
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLER--VKKLKDYAFIHFD 344
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 12/67 (17%)
Frame = +3
Query: 288 DGKLRNSRTLRVRFAPHNSAVRVK-----NLPPFVSNELLYRSFEIFGKIER-------A 431
D K +N + + H +A +VK NL V+ E+L ++F FGK+ER A
Sbjct: 280 DDKKKNRGFCFLEYEDHKTAAQVKVLFVRNLANTVTEEILEKAFSQFGKLERVKKLKDYA 339
Query: 432 YVKVDER 452
++ DER
Sbjct: 340 FIHFDER 346
>AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein.
Length = 588
Score = 35.5 bits (78), Expect = 0.19
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKMD 252
L++ NL N VTEE + K FS FG+ + K K++ FI D
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLER--VKKLKDYAFIHFD 344
Score = 31.9 bits (69), Expect = 2.4
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 12/67 (17%)
Frame = +3
Query: 288 DGKLRNSRTLRVRFAPHNSAVRVK-----NLPPFVSNELLYRSFEIFGKIER-------A 431
D K +N + + H +A +VK NL V+ E+L ++F FGK+ER A
Sbjct: 280 DDKKKNRSFCFLEYEDHKTAAQVKVLFVRNLANTVTEEILEKAFSQFGKLERVKKLKDYA 339
Query: 432 YVKVDER 452
++ DER
Sbjct: 340 FIHFDER 346
>M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein.
Length = 375
Score = 34.7 bits (76), Expect = 0.33
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIK 246
+Y G + + +T++ + + FSPFG+ E+ + EK + F++
Sbjct: 207 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVR 246
Score = 33.5 bits (73), Expect = 0.77
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 6/45 (13%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEAS------ELFLNKEKNFGFI 243
+++G+L+ ++T E+I F+PFG+ S ++ K K +GF+
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 143
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +1
Query: 112 NGRSR-LYIGNLTNDVTEEEIMKMFSPFG 195
+G+ R LY+GNL+ DVTE I+++FS G
Sbjct: 5 DGQPRTLYVGNLSRDVTEVLILQLFSQIG 33
>D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein
protein.
Length = 265
Score = 34.7 bits (76), Expect = 0.33
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIK 246
+Y G + + +T++ + + FSPFG+ E+ + EK + F++
Sbjct: 168 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVR 207
Score = 33.5 bits (73), Expect = 0.77
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 6/45 (13%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEAS------ELFLNKEKNFGFI 243
+++G+L+ ++T E+I F+PFG+ S ++ K K +GF+
Sbjct: 60 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 104
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 34.7 bits (76), Expect = 0.33
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N++LY +F FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKVLYDTFSAFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G V F + +A
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQEAA 151
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL--NKEKNFGFI 243
LYI NL + + +E++ K FSPFG ++++ L + K FGF+
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFV 338
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 ERAKRELDGKLRNSRTLRVRFAPHNSA-VRVKNLPPFVSNELLYRSFEIFGKIERAYVKV 443
++ +R+ + K + + + R + + + +KNL + +E L + F FG I A V +
Sbjct: 268 KKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 327
Query: 444 DERGKTLGEGVVEFARKPSALSQFVT 521
++ G++ G G V F+ P ++ VT
Sbjct: 328 ED-GRSKGFGFVCFS-SPEEATKAVT 351
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 348 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
V +KN V +E L F FGK V D GK+ G G V + + A
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDA 244
>BC030025-1|AAH30025.1| 252|Homo sapiens TIAL1 protein protein.
Length = 252
Score = 34.7 bits (76), Expect = 0.33
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIK 246
+Y G + + +T++ + + FSPFG+ E+ + EK + F++
Sbjct: 84 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVR 123
>BC016582-1|AAH16582.1| 532|Homo sapiens polypyrimidine tract
binding protein 2 protein.
Length = 532
Score = 34.7 bits (76), Expect = 0.33
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 QSEVKFNGR-SR-LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
+ E K +G SR L+I L +VTE E++ + PFG+ + + + K KN F+++
Sbjct: 48 KGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLEL 101
>AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7
protein protein.
Length = 374
Score = 34.7 bits (76), Expect = 0.33
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIK 246
+Y G + + +T++ + + FSPFG+ E+ + EK + F++
Sbjct: 207 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVR 246
Score = 33.5 bits (73), Expect = 0.77
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 6/45 (13%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEAS------ELFLNKEKNFGFI 243
+++G+L+ ++T E+I F+PFG+ S ++ K K +GF+
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 143
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +1
Query: 112 NGRSR-LYIGNLTNDVTEEEIMKMFSPFG 195
+G+ R LY+GNL+ DVTE I+++FS G
Sbjct: 5 DGQPRTLYVGNLSRDVTEVLILQLFSQIG 33
>AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein.
Length = 236
Score = 34.7 bits (76), Expect = 0.33
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 354 VKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSA 503
V LP ++ L + FE+FG+IE A V D + GK+ G G V A + +A
Sbjct: 15 VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAA 65
>AL357150-5|CAH70269.1| 531|Homo sapiens polypyrimidine tract
binding protein 2 protein.
Length = 531
Score = 34.7 bits (76), Expect = 0.33
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 QSEVKFNGR-SR-LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
+ E K +G SR L+I L +VTE E++ + PFG+ + + + K KN F+++
Sbjct: 48 KGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLEL 101
>AL357150-4|CAH70267.1| 537|Homo sapiens polypyrimidine tract
binding protein 2 protein.
Length = 537
Score = 34.7 bits (76), Expect = 0.33
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 QSEVKFNGR-SR-LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
+ E K +G SR L+I L +VTE E++ + PFG+ + + + K KN F+++
Sbjct: 48 KGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLEL 101
>AL357150-3|CAH70266.1| 536|Homo sapiens polypyrimidine tract
binding protein 2 protein.
Length = 536
Score = 34.7 bits (76), Expect = 0.33
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 QSEVKFNGR-SR-LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
+ E K +G SR L+I L +VTE E++ + PFG+ + + + K KN F+++
Sbjct: 48 KGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLEL 101
>AL357150-2|CAH70268.1| 532|Homo sapiens polypyrimidine tract
binding protein 2 protein.
Length = 532
Score = 34.7 bits (76), Expect = 0.33
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 QSEVKFNGR-SR-LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
+ E K +G SR L+I L +VTE E++ + PFG+ + + + K KN F+++
Sbjct: 48 KGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLEL 101
>AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA
sequence from clone RP1-259A10 on chromosome 6p22.1-23
Contains the gene for an ssDNA binding protein and a CpG
island. ).
Length = 236
Score = 34.7 bits (76), Expect = 0.33
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 354 VKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSA 503
V LP ++ L + FE+FG+IE A V D + GK+ G G V A + +A
Sbjct: 15 VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAA 65
>AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens
cDNA FLJ37697 fis, clone BRHIP2015360, highly similar to
Xenopus laevis RRM-containing protein SEB-4 mRNA. ).
Length = 211
Score = 34.7 bits (76), Expect = 0.33
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 354 VKNLPPFVSNELLYRSFEIFGKIERAYVKVD-ERGKTLGEGVVEFARKPSA 503
V LP ++ L + FE+FG+IE A V D + GK+ G G V A + +A
Sbjct: 15 VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAA 65
>AF530581-1|AAM94625.1| 536|Homo sapiens non-neuronal splice
variant nPTB4 protein.
Length = 536
Score = 34.7 bits (76), Expect = 0.33
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 QSEVKFNGR-SR-LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
+ E K +G SR L+I L +VTE E++ + PFG+ + + + K KN F+++
Sbjct: 48 KGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLEL 101
>AF530580-1|AAM94624.1| 537|Homo sapiens non-neuronal splice
variant nPTB3 protein.
Length = 537
Score = 34.7 bits (76), Expect = 0.33
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 QSEVKFNGR-SR-LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
+ E K +G SR L+I L +VTE E++ + PFG+ + + + K KN F+++
Sbjct: 48 KGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLEL 101
>AF176085-1|AAF14284.1| 531|Homo sapiens neural polypyrimidine
tract binding protein protein.
Length = 531
Score = 34.7 bits (76), Expect = 0.33
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 QSEVKFNGR-SR-LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
+ E K +G SR L+I L +VTE E++ + PFG+ + + + K KN F+++
Sbjct: 48 KGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLEL 101
>AB209266-1|BAD92503.1| 177|Homo sapiens polypyrimidine tract
binding protein 2 variant protein.
Length = 177
Score = 34.7 bits (76), Expect = 0.33
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 QSEVKFNGR-SR-LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
+ E K +G SR L+I L +VTE E++ + PFG+ + + + K KN F+++
Sbjct: 70 KGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLEL 123
>AB209260-1|BAD92497.1| 183|Homo sapiens TIA1 cytotoxic
granule-associated RNA-binding protein-like 1 isoform 2
variant protein.
Length = 183
Score = 34.7 bits (76), Expect = 0.33
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIK 246
+Y G + + +T++ + + FSPFG+ E+ + EK + F++
Sbjct: 86 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVR 125
>AB051233-1|BAB71743.1| 356|Homo sapiens PTB-like protein S
protein.
Length = 356
Score = 34.7 bits (76), Expect = 0.33
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 QSEVKFNGR-SR-LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
+ E K +G SR L+I L +VTE E++ + PFG+ + + + K KN F+++
Sbjct: 48 KGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLEL 101
>AB051232-1|BAB71742.1| 532|Homo sapiens PTB-like protein L
protein.
Length = 532
Score = 34.7 bits (76), Expect = 0.33
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 QSEVKFNGR-SR-LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
+ E K +G SR L+I L +VTE E++ + PFG+ + + + K KN F+++
Sbjct: 48 KGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLEL 101
>X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric cap
binding complex CBC protein.
Length = 156
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 91 EQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEK 228
E+ E LY+GNL+ TEE+I ++FS G+ ++ + +K
Sbjct: 30 EEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
>U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c
protein.
Length = 221
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKN---FGFIKMD 252
G R+Y+GNL DV E+++ +F +G E+ L F F++ +
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE 60
>U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein.
Length = 358
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL----NKEKNFGFIKMD 252
++I +L + T+ EI++MF PFG ++++F+ N+ K FGF+ D
Sbjct: 275 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFD 322
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL--NKEKNFGFI 243
LYI NL + + +E++ K FSPFG ++++ L + K FGF+
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFV 338
Score = 33.9 bits (74), Expect = 0.58
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G V F + +A
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQEAA 151
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 ERAKRELDGKLRNSRTLRVRFAPHNSA-VRVKNLPPFVSNELLYRSFEIFGKIERAYVKV 443
++ +R+ + K + + + R + + + +KNL + +E L + F FG I A V +
Sbjct: 268 KKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 327
Query: 444 DERGKTLGEGVVEFARKPSALSQFVT 521
++ G++ G G V F+ P ++ VT
Sbjct: 328 ED-GRSKGFGFVCFS-SPEEATKAVT 351
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 348 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
V +KN V +E L F FGK V D GK+ G G V + + A
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDA 244
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL--NKEKNFGFI 243
LYI NL + + +E++ K FSPFG ++++ L + K FGF+
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFV 338
Score = 33.9 bits (74), Expect = 0.58
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G V F + +A
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQEAA 151
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 ERAKRELDGKLRNSRTLRVRFAPHNSA-VRVKNLPPFVSNELLYRSFEIFGKIERAYVKV 443
++ +R+ + K + + + R + + + +KNL + +E L + F FG I A V +
Sbjct: 268 KKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 327
Query: 444 DERGKTLGEGVVEFARKPSALSQFVT 521
++ G++ G G V F+ P ++ VT
Sbjct: 328 ED-GRSKGFGFVCFS-SPEEATKAVT 351
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 348 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
V +KN V +E L F FGK V D GK+ G G V + + A
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDA 244
>U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein.
Length = 221
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKN---FGFIKMD 252
G R+Y+GNL DV E+++ +F +G E+ L F F++ +
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE 60
>D59253-1|BAA09599.1| 156|Homo sapiens NCBP interacting protein 1
protein.
Length = 156
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 91 EQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEK 228
E+ E LY+GNL+ TEE+I ++FS G+ ++ + +K
Sbjct: 30 EEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL--NKEKNFGFI 243
LYI NL + + +E++ K FSPFG ++++ L + K FGF+
Sbjct: 107 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFV 149
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 ERAKRELDGKLRNSRTLRVRFAPHNSA-VRVKNLPPFVSNELLYRSFEIFGKIERAYVKV 443
++ +R+ + K + + + R + + + +KNL + +E L + F FG I A V +
Sbjct: 79 KKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 138
Query: 444 DERGKTLGEGVVEFARKPSALSQFVT 521
++ G++ G G V F+ P ++ VT
Sbjct: 139 ED-GRSKGFGFVCFS-SPEEATKAVT 162
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 348 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
V +KN V +E L F FGK V D GK+ G G V + + A
Sbjct: 4 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDA 55
>DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear
ribonucleoprotein-R2 protein.
Length = 595
Score = 34.3 bits (75), Expect = 0.44
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLKDLQGPLFDLP---PMEQSEVKFNGRSR-LYIGNLTNDVTEEE 168
D+ AQ ++S K+K + G + + P+E+ + + + + L++ NL VTEE
Sbjct: 260 DHKSAAQARRRLMSGKVK-VWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEI 318
Query: 169 IMKMFSPFGEASELFLNKEKNFGFIKMD 252
+ K FS FG+ + K K++ F+ +
Sbjct: 319 LEKSFSEFGKLER--VKKLKDYAFVHFE 344
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 7/41 (17%)
Frame = +3
Query: 354 VKNLPPFVSNELLYRSFEIFGKIER-------AYVKVDERG 455
V+NL V+ E+L +SF FGK+ER A+V ++RG
Sbjct: 307 VRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRG 347
>BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 34.3 bits (75), Expect = 0.44
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLKDLQGPLFDLP---PMEQSEVKFNGRSR-LYIGNLTNDVTEEE 168
D+ AQ ++S K+K + G + + P+E+ + + + + L++ NL VTEE
Sbjct: 278 DHKSAAQARRRLMSGKVK-VWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEI 336
Query: 169 IMKMFSPFGEASELFLNKEKNFGFIKMD 252
+ K FS FG+ + K K++ F+ +
Sbjct: 337 LEKSFSEFGKLER--VKKLKDYAFVHFE 362
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 7/41 (17%)
Frame = +3
Query: 354 VKNLPPFVSNELLYRSFEIFGKIER-------AYVKVDERG 455
V+NL V+ E+L +SF FGK+ER A+V ++RG
Sbjct: 325 VRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRG 365
>BX537372-1|CAD97614.1| 119|Homo sapiens hypothetical protein
protein.
Length = 119
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 91 EQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEK 228
E+ E LY+GNL+ TEE+I ++FS G+ ++ + +K
Sbjct: 49 EEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 94
>BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding
protein subunit 2, 20kDa protein.
Length = 156
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 91 EQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEK 228
E+ E LY+GNL+ TEE+I ++FS G+ ++ + +K
Sbjct: 30 EEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
>BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein.
Length = 252
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL--NKEKNFGFI 243
LYI NL + + +E++ K FSPFG ++++ L + K FGF+
Sbjct: 46 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFV 88
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 ERAKRELDGKLRNSRTLRVRFAPHNSA-VRVKNLPPFVSNELLYRSFEIFGKIERAYVKV 443
++ +R+ + K + + + R + + + +KNL + +E L + F FG I A V +
Sbjct: 18 KKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 77
Query: 444 DERGKTLGEGVVEFARKPSALSQFVT 521
++ G++ G G V F+ P ++ VT
Sbjct: 78 ED-GRSKGFGFVCFS-SPEEATKAVT 101
>BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein.
Length = 607
Score = 34.3 bits (75), Expect = 0.44
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLKDLQGPLFDLP---PMEQSEVKFNGRSR-LYIGNLTNDVTEEE 168
D+ AQ ++S K+K + G + + P+E+ + + + + L++ NL VTEE
Sbjct: 272 DHKSAAQARRRLMSGKVK-VWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEI 330
Query: 169 IMKMFSPFGEASELFLNKEKNFGFIKMD 252
+ K FS FG+ + K K++ F+ +
Sbjct: 331 LEKSFSEFGKLER--VKKLKDYAFVHFE 356
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 7/41 (17%)
Frame = +3
Query: 354 VKNLPPFVSNELLYRSFEIFGKIER-------AYVKVDERG 455
V+NL V+ E+L +SF FGK+ER A+V ++RG
Sbjct: 319 VRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRG 359
>BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein.
Length = 281
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL--NKEKNFGFI 243
LYI NL + + +E++ K FSPFG ++++ L + K FGF+
Sbjct: 46 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFV 88
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 ERAKRELDGKLRNSRTLRVRFAPHNSA-VRVKNLPPFVSNELLYRSFEIFGKIERAYVKV 443
++ +R+ + K + + + R + + + +KNL + +E L + F FG I A V +
Sbjct: 18 KKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 77
Query: 444 DERGKTLGEGVVEFARKPSALSQFVT 521
++ G++ G G V F+ P ++ VT
Sbjct: 78 ED-GRSKGFGFVCFS-SPEEATKAVT 101
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL----NKEKNFGFIKMD 252
++I +L + T+ EI++MF PFG ++++F+ N+ K FGF+ D
Sbjct: 382 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFD 429
Score = 32.3 bits (70), Expect = 1.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L++G L T+E++ KMF PFG E
Sbjct: 96 KLFVGMLGKQQTDEDVRKMFEPFGTIDE 123
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL--NKEKNFGFI 243
LYI NL + + +E++ K FSPFG ++++ L + K FGF+
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFV 338
Score = 33.9 bits (74), Expect = 0.58
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G V F + +A
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQEAA 151
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 ERAKRELDGKLRNSRTLRVRFAPHNSA-VRVKNLPPFVSNELLYRSFEIFGKIERAYVKV 443
++ +R+ + K + + + R + + + +KNL + +E L + F FG I A V +
Sbjct: 268 KKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 327
Query: 444 DERGKTLGEGVVEFARKPSALSQFVT 521
++ G++ G G V F+ P ++ VT
Sbjct: 328 ED-GRSKGFGFVCFS-SPEEATKAVT 351
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 348 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
V +KN V +E L F FGK V D GK+ G G V + + A
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDA 244
>BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKN---FGFIKMD 252
G R+Y+GNL DV E+++ +F +G E+ L F F++ +
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE 60
>BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKN---FGFIKMD 252
G R+Y+GNL DV E+++ +F +G E+ L F F++ +
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE 60
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL--NKEKNFGFI 243
LYI NL + + +E++ K FSPFG ++++ L + K FGF+
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFV 338
Score = 33.9 bits (74), Expect = 0.58
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G V F + +A
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQEAA 151
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 ERAKRELDGKLRNSRTLRVRFAPHNSA-VRVKNLPPFVSNELLYRSFEIFGKIERAYVKV 443
++ +R+ + K + + + R + + + +KNL + +E L + F FG I A V +
Sbjct: 268 KKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 327
Query: 444 DERGKTLGEGVVEFARKPSALSQFVT 521
++ G++ G G V F+ P ++ VT
Sbjct: 328 ED-GRSKGFGFVCFS-SPEEATKAVT 351
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 348 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
V +KN V +E L F FGK V D GK+ G G V + + A
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDA 244
>BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein.
Length = 407
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL----NKEKNFGFIKMD 252
++I +L + T+ EI++MF PFG ++++F+ N+ K FGF+ D
Sbjct: 324 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFD 371
Score = 33.9 bits (74), Expect = 0.58
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASE 207
++ ++ + G +L++G L T+E++ KMF PFG E
Sbjct: 26 VKPADSESRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDE 65
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 34.3 bits (75), Expect = 0.44
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 315 LRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFA 488
L+ + P + +KNL +++E L F FG I RA V + E G+ G GVV F+
Sbjct: 293 LKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMM-EVGQGKGFGVVCFS 349
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 118 RSRLYIGNLTNDVTEEEIMKMFSPFG 195
++ LY+G+L DVTE+ + K F P G
Sbjct: 17 KAALYVGDLDPDVTEDMLYKKFRPAG 42
>BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 464
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL----NKEKNFGFIKMD 252
++I +L + T+ EI++MF PFG ++++F+ N+ K FGF+ D
Sbjct: 381 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFD 428
Score = 32.3 bits (70), Expect = 1.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L++G L T+E++ KMF PFG E
Sbjct: 96 KLFVGMLGKQQTDEDVRKMFEPFGTIDE 123
>BC044585-1|AAH44585.1| 558|Homo sapiens ROD1 protein protein.
Length = 558
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +1
Query: 76 DLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
D PP S V L++ + DVTE EI+ + PFG+ + L + K K+ F++M
Sbjct: 57 DRPPCSPSRV-------LHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEM 107
>BC039896-1|AAH39896.1| 618|Homo sapiens Similar to ROD1 regulator
of differentiation 1 (S. pombe) protein.
Length = 618
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +1
Query: 76 DLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
D PP S V L++ + DVTE EI+ + PFG+ + L + K K+ F++M
Sbjct: 94 DRPPCSPSRV-------LHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEM 144
>BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein.
Length = 521
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + +++I++MF PFG ++++F++K+ N FGF+ D
Sbjct: 436 ANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD 485
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L+IG ++ E +I MFSPFG+ E
Sbjct: 128 KLFIGMVSKKCNENDIRVMFSPFGQIEE 155
>BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein.
Length = 636
Score = 34.3 bits (75), Expect = 0.44
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLKDLQGPLFDLP---PMEQSEVKFNGRSR-LYIGNLTNDVTEEE 168
D+ AQ ++S K+K + G + + P+E+ + + + + L++ NL VTEE
Sbjct: 301 DHKSAAQARRRLMSGKVK-VWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEI 359
Query: 169 IMKMFSPFGEASELFLNKEKNFGFIKMD 252
+ K FS FG+ + K K++ F+ +
Sbjct: 360 LEKSFSEFGKLER--VKKLKDYAFVHFE 385
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 7/41 (17%)
Frame = +3
Query: 354 VKNLPPFVSNELLYRSFEIFGKIER-------AYVKVDERG 455
V+NL V+ E+L +SF FGK+ER A+V ++RG
Sbjct: 348 VRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRG 388
>BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding
protein subunit 2, 20kDa protein.
Length = 156
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 91 EQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEK 228
E+ E LY+GNL+ TEE+I ++FS G+ ++ + +K
Sbjct: 30 EEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
>AY644767-1|AAV85455.1| 156|Homo sapiens cell
proliferation-inducing gene 55 protein.
Length = 156
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 91 EQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEK 228
E+ E LY+GNL+ TEE+I ++FS G+ ++ + +K
Sbjct: 30 EEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
>AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL----NKEKNFGFIKMD 252
++I +L + T+ EI++MF PFG ++++F+ N+ K FGF+ D
Sbjct: 382 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFD 429
Score = 32.3 bits (70), Expect = 1.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L++G L T+E++ KMF PFG E
Sbjct: 96 KLFVGMLGKQQTDEDVRKMFEPFGTIDE 123
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL--NKEKNFGFI 243
LYI NL + + +E++ K FSPFG ++++ L + K FGF+
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFV 338
Score = 33.9 bits (74), Expect = 0.58
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G V F + +A
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQEAA 151
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 ERAKRELDGKLRNSRTLRVRFAPHNSA-VRVKNLPPFVSNELLYRSFEIFGKIERAYVKV 443
++ +R+ + K + + + R + + + +KNL + +E L + F FG I A V +
Sbjct: 268 KKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 327
Query: 444 DERGKTLGEGVVEFARKPSALSQFVT 521
++ G++ G G V F+ P ++ VT
Sbjct: 328 ED-GRSKGFGFVCFS-SPEEATKAVT 351
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 348 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
V +KN V +E L F FGK V D GK+ G G V + + A
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDA 244
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL--NKEKNFGFI 243
LYI NL + + +E++ K FSPFG ++++ L + K FGF+
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFV 338
Score = 33.9 bits (74), Expect = 0.58
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G V F + +A
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQEAA 151
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 ERAKRELDGKLRNSRTLRVRFAPHNSA-VRVKNLPPFVSNELLYRSFEIFGKIERAYVKV 443
++ +R+ + K + + + R + + + +KNL + +E L + F FG I A V +
Sbjct: 268 KKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 327
Query: 444 DERGKTLGEGVVEFARKPSALSQFVT 521
++ G++ G G V F+ P ++ VT
Sbjct: 328 ED-GRSKGFGFVCFS-SPEEATKAVT 351
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 348 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
V +KN V +E L F FGK V D GK+ G G V + + A
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDA 244
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL--NKEKNFGFI 243
LYI NL + + +E++ K FSPFG ++++ L + K FGF+
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFV 338
Score = 33.9 bits (74), Expect = 0.58
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G V F + +A
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQEAA 151
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 ERAKRELDGKLRNSRTLRVRFAPHNSA-VRVKNLPPFVSNELLYRSFEIFGKIERAYVKV 443
++ +R+ + K + + + R + + + +KNL + +E L + F FG I A V +
Sbjct: 268 KKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 327
Query: 444 DERGKTLGEGVVEFARKPSALSQFVT 521
++ G++ G G V F+ P ++ VT
Sbjct: 328 ED-GRSKGFGFVCFS-SPEEATKAVT 351
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 348 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
V +KN V +E L F FGK V D GK+ G G V + + A
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDA 244
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 34.3 bits (75), Expect = 0.44
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 315 LRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFA 488
L+ + P + +KNL +++E L F FG I RA V + E G+ G GVV F+
Sbjct: 129 LKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMM-EVGQGKGFGVVCFS 185
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 34.3 bits (75), Expect = 0.44
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 315 LRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFA 488
L+ + P + +KNL +++E L F FG I RA V + E G+ G GVV F+
Sbjct: 293 LKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMM-EVGQGKGFGVVCFS 349
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 118 RSRLYIGNLTNDVTEEEIMKMFSPFG 195
++ LY+G+L DVTE+ + K F P G
Sbjct: 17 KAALYVGDLDPDVTEDMLYKKFRPAG 42
>AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL----NKEKNFGFIKMD 252
++I +L + T+ EI++MF PFG ++++F+ N+ K FGF+ D
Sbjct: 382 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFD 429
Score = 33.9 bits (74), Expect = 0.58
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASE 207
++ ++ + G +L++G L T+E++ KMF PFG E
Sbjct: 84 VKPADSESRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDE 123
>AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 415
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL----NKEKNFGFIKMD 252
++I +L + T+ EI++MF PFG ++++F+ N+ K FGF+ D
Sbjct: 332 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFD 379
Score = 32.3 bits (70), Expect = 1.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L++G L T+E++ KMF PFG E
Sbjct: 96 KLFVGMLGKQQTDEDVRKMFEPFGTIDE 123
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL----NKEKNFGFIKMD 252
++I +L + T+ EI++MF PFG ++++F+ N+ K FGF+ D
Sbjct: 382 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFD 429
Score = 32.3 bits (70), Expect = 1.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L++G L T+E++ KMF PFG E
Sbjct: 96 KLFVGMLGKQQTDEDVRKMFEPFGTIDE 123
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL--NKEKNFGFI 243
LYI NL + + +E++ K FSPFG ++++ L + K FGF+
Sbjct: 75 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFV 117
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 ERAKRELDGKLRNSRTLRVRFAPHNSA-VRVKNLPPFVSNELLYRSFEIFGKIERAYVKV 443
++ +R+ + K + + + R + + + +KNL + +E L + F FG I A V +
Sbjct: 47 KKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 106
Query: 444 DERGKTLGEGVVEFARKPSALSQFVT 521
++ G++ G G V F+ P ++ VT
Sbjct: 107 ED-GRSKGFGFVCFS-SPEEATKAVT 130
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL--NKEKNFGFI 243
LYI NL + + +E++ K FSPFG ++++ L + K FGF+
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFV 338
Score = 33.9 bits (74), Expect = 0.58
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G V F + +A
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQEAA 151
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 ERAKRELDGKLRNSRTLRVRFAPHNSA-VRVKNLPPFVSNELLYRSFEIFGKIERAYVKV 443
++ +R+ + K + + + R + + + +KNL + +E L + F FG I A V +
Sbjct: 268 KKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 327
Query: 444 DERGKTLGEGVVEFARKPSALSQFVT 521
++ G++ G G V F+ P ++ VT
Sbjct: 328 ED-GRSKGFGFVCFS-SPEEATKAVT 351
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 348 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
V +KN V +E L F FGK V D GK+ G G V + + A
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDA 244
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL--NKEKNFGFI 243
LYI NL + + +E++ K FSPFG ++++ L + K FGF+
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFV 338
Score = 33.9 bits (74), Expect = 0.58
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G V F + +A
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQEAA 151
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 ERAKRELDGKLRNSRTLRVRFAPHNSA-VRVKNLPPFVSNELLYRSFEIFGKIERAYVKV 443
++ +R+ + K + + + R + + + +KNL + +E L + F FG I A V +
Sbjct: 268 KKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 327
Query: 444 DERGKTLGEGVVEFARKPSALSQFVT 521
++ G++ G G V F+ P ++ VT
Sbjct: 328 ED-GRSKGFGFVCFS-SPEEATKAVT 351
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 348 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
V +KN V +E L F FGK V D GK+ G G V + + A
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDA 244
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL--NKEKNFGFI 243
LYI NL + + +E++ K FSPFG ++++ L + K FGF+
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFV 338
Score = 33.9 bits (74), Expect = 0.58
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 NAERAKRELDGKLRNSRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRSFEIFG 416
+AERA ++ + + +R+ ++ + ++R +KNL + N+ LY +F FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 417 KIERAYVKVDERGKTLGEGVVEFARKPSA 503
I V DE G + G V F + +A
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQEAA 151
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 ERAKRELDGKLRNSRTLRVRFAPHNSA-VRVKNLPPFVSNELLYRSFEIFGKIERAYVKV 443
++ +R+ + K + + + R + + + +KNL + +E L + F FG I A V +
Sbjct: 268 KKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML 327
Query: 444 DERGKTLGEGVVEFARKPSALSQFVT 521
++ G++ G G V F+ P ++ VT
Sbjct: 328 ED-GRSKGFGFVCFS-SPEEATKAVT 351
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 348 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
V +KN V +E L F FGK V D GK+ G G V + + A
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDA 244
>AL359073-2|CAI14113.1| 552|Homo sapiens ROD1 regulator of
differentiation 1 (S. pombe) protein.
Length = 552
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +1
Query: 76 DLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
D PP S V L++ + DVTE EI+ + PFG+ + L + K K+ F++M
Sbjct: 51 DRPPCSPSRV-------LHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEM 101
>AL359073-1|CAI14112.1| 183|Homo sapiens ROD1 regulator of
differentiation 1 (S. pombe) protein.
Length = 183
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +1
Query: 76 DLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
D PP S V L++ + DVTE EI+ + PFG+ + L + K K+ F++M
Sbjct: 57 DRPPCSPSRV-------LHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEM 107
>AL158824-8|CAI12353.1| 524|Homo sapiens ROD1 regulator of
differentiation 1 (S. pombe) protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +1
Query: 76 DLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
D PP S V L++ + DVTE EI+ + PFG+ + L + K K+ F++M
Sbjct: 23 DRPPCSPSRV-------LHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEM 73
>AL158824-5|CAI12350.1| 552|Homo sapiens ROD1 regulator of
differentiation 1 (S. pombe) protein.
Length = 552
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +1
Query: 76 DLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
D PP S V L++ + DVTE EI+ + PFG+ + L + K K+ F++M
Sbjct: 51 DRPPCSPSRV-------LHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEM 101
>AL158824-4|CAI12349.1| 183|Homo sapiens ROD1 regulator of
differentiation 1 (S. pombe) protein.
Length = 183
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +1
Query: 76 DLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
D PP S V L++ + DVTE EI+ + PFG+ + L + K K+ F++M
Sbjct: 57 DRPPCSPSRV-------LHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEM 107
>AL157704-2|CAH70230.1| 490|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 490
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + +++I++MF PFG ++++F++K+ N FGF+ D
Sbjct: 405 ANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD 454
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L+IG ++ E +I MFSPFG+ E
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEE 136
>AL157704-1|CAH70231.1| 498|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 498
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + +++I++MF PFG ++++F++K+ N FGF+ D
Sbjct: 413 ANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD 462
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L+IG ++ E +I MFSPFG+ E
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEE 136
>AL136320-2|CAI20169.1| 490|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 490
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + +++I++MF PFG ++++F++K+ N FGF+ D
Sbjct: 405 ANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD 454
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L+IG ++ E +I MFSPFG+ E
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEE 136
>AL136320-1|CAI20168.1| 498|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 498
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + +++I++MF PFG ++++F++K+ N FGF+ D
Sbjct: 413 ANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD 462
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L+IG ++ E +I MFSPFG+ E
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEE 136
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 34.3 bits (75), Expect = 0.44
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 315 LRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFA 488
L+ + P + +KNL +++E L F FG I RA V + E G+ G GVV F+
Sbjct: 278 LKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMM-EVGQGKGFGVVCFS 334
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 118 RSRLYIGNLTNDVTEEEIMKMFSPFG 195
++ LY+G+L DVTE+ + K F P G
Sbjct: 2 KAALYVGDLDPDVTEDMLYKKFRPAG 27
>AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 636
Score = 34.3 bits (75), Expect = 0.44
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLKDLQGPLFDLP---PMEQSEVKFNGRSR-LYIGNLTNDVTEEE 168
D+ AQ ++S K+K + G + + P+E+ + + + + L++ NL VTEE
Sbjct: 301 DHKSAAQARRRLMSGKVK-VWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEI 359
Query: 169 IMKMFSPFGEASELFLNKEKNFGFIKMD 252
+ K FS FG+ + K K++ F+ +
Sbjct: 360 LEKSFSEFGKLER--VKKLKDYAFVHFE 385
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 7/41 (17%)
Frame = +3
Query: 354 VKNLPPFVSNELLYRSFEIFGKIER-------AYVKVDERG 455
V+NL V+ E+L +SF FGK+ER A+V ++RG
Sbjct: 348 VRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRG 388
>AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 34.3 bits (75), Expect = 0.44
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLKDLQGPLFDLP---PMEQSEVKFNGRSR-LYIGNLTNDVTEEE 168
D+ AQ ++S K+K + G + + P+E+ + + + + L++ NL VTEE
Sbjct: 298 DHKSAAQARRRLMSGKVK-VWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEI 356
Query: 169 IMKMFSPFGEASELFLNKEKNFGFIKMD 252
+ K FS FG+ + K K++ F+ +
Sbjct: 357 LEKSFSEFGKLER--VKKLKDYAFVHFE 382
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 7/41 (17%)
Frame = +3
Query: 354 VKNLPPFVSNELLYRSFEIFGKIER-------AYVKVDERG 455
V+NL V+ E+L +SF FGK+ER A+V ++RG
Sbjct: 345 VRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRG 385
>AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1
Query: 115 GRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKN---FGFIKMD 252
G R+Y+GNL DV E+++ +F +G E+ L F F++ +
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE 60
>AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant
protein.
Length = 371
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL--NKEKNFGFI 243
LYI NL + + +E++ K FSPFG ++++ L + K FGF+
Sbjct: 7 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFV 49
Score = 30.7 bits (66), Expect = 5.4
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +3
Query: 354 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSALSQFVT 521
+KNL + +E L + F FG I A V +++ G++ G G V F+ P ++ VT
Sbjct: 9 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFS-SPEEATKAVT 62
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 34.3 bits (75), Expect = 0.44
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 315 LRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFA 488
L+ + P + +KNL +++E L F FG I RA V + E G+ G GVV F+
Sbjct: 293 LKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMM-EVGQGKGFGVVCFS 349
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 118 RSRLYIGNLTNDVTEEEIMKMFSPFG 195
++ LY+G+L DVTE+ + K F P G
Sbjct: 17 KAALYVGDLDPDVTEDMLYKKFRPAG 42
>AF432906-1|AAL27627.1| 488|Homo sapiens neuroblastoma
apoptosis-related RNA-binding protein isoform 4 protein.
Length = 488
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + +++I++MF PFG ++++F++K+ N FGF+ D
Sbjct: 403 ANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD 452
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L+IG ++ E +I MFSPFG+ E
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEE 136
>AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 462
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL----NKEKNFGFIKMD 252
++I +L + T+ EI++MF PFG ++++F+ N+ K FGF+ D
Sbjct: 379 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFD 426
Score = 32.3 bits (70), Expect = 1.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L++G L T+E++ KMF PFG E
Sbjct: 96 KLFVGMLGKQQTDEDVRKMFEPFGTIDE 123
>AF295068-3|AAK72223.1| 484|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 3 protein.
Length = 484
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + +++I++MF PFG ++++F++K+ N FGF+ D
Sbjct: 399 ANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD 448
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L+IG ++ E +I MFSPFG+ E
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEE 136
>AF295068-2|AAK92699.1| 490|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 1 protein.
Length = 490
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + +++I++MF PFG ++++F++K+ N FGF+ D
Sbjct: 405 ANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD 454
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L+IG ++ E +I MFSPFG+ E
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEE 136
>AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 2 protein.
Length = 509
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + +++I++MF PFG ++++F++K+ N FGF+ D
Sbjct: 424 ANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD 473
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L+IG ++ E +I MFSPFG+ E
Sbjct: 128 KLFIGMVSKKCNENDIRVMFSPFGQIEE 155
>AF284423-1|AAG14457.1| 140|Homo sapiens RNA-binding protein
BRUNOL1 protein.
Length = 140
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL----NKEKNFGFIKMD 252
++I +L + T+ EI++MF PFG ++++F+ N+ K FGF+ D
Sbjct: 57 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFD 104
>AF090693-1|AAD13760.1| 508|Homo sapiens apoptosis-related RNA
binding protein protein.
Length = 508
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + +++I++MF PFG ++++F++K+ N FGF+ D
Sbjct: 423 ANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD 472
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L+IG ++ E +I MFSPFG+ E
Sbjct: 133 KLFIGMVSKKCNENDIRVMFSPFGQIEE 160
>AF036956-1|AAD02074.1| 490|Homo sapiens neuroblastoma
apoptosis-related RNA binding protein protein.
Length = 490
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + +++I++MF PFG ++++F++K+ N FGF+ D
Sbjct: 405 ANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD 454
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L+IG ++ E +I MFSPFG+ E
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEE 136
>AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 34.3 bits (75), Expect = 0.44
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +1
Query: 1 DNMKPAQREEIILSNKLKDLQGPLFDLP---PMEQSEVKFNGRSR-LYIGNLTNDVTEEE 168
D+ AQ ++S K+K + G + + P+E+ + + + + L++ NL VTEE
Sbjct: 298 DHKSAAQARRRLMSGKVK-VWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEI 356
Query: 169 IMKMFSPFGEASELFLNKEKNFGFIKMD 252
+ K FS FG+ + K K++ F+ +
Sbjct: 357 LEKSFSEFGKLER--VKKLKDYAFVHFE 382
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 7/41 (17%)
Frame = +3
Query: 354 VKNLPPFVSNELLYRSFEIFGKIER-------AYVKVDERG 455
V+NL V+ E+L +SF FGK+ER A+V ++RG
Sbjct: 345 VRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRG 385
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGE--ASELFL----NKEKNFGFIKMD 252
++I +L + T+ EI++MF PFG ++++F+ N+ K FGF+ D
Sbjct: 358 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFD 405
Score = 32.3 bits (70), Expect = 1.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L++G L T+E++ KMF PFG E
Sbjct: 72 KLFVGMLGKQQTDEDVRKMFEPFGTIDE 99
>AB023967-1|BAA75466.1| 521|Homo sapiens Rod1 protein.
Length = 521
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +1
Query: 76 DLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIKM 249
D PP S V L++ + DVTE EI+ + PFG+ + L + K K+ F++M
Sbjct: 20 DRPPCSPSRV-------LHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEM 70
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 33.9 bits (74), Expect = 0.58
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +1
Query: 43 NKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASEL---- 210
N K QG + E+ ++ +GR L++ NL TEE++ K+FS +G SEL
Sbjct: 379 NTTKSWQGRILG-ENEEEEDLAESGR--LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPI 435
Query: 211 --FLNKEKNFGFI 243
K K F FI
Sbjct: 436 DSLTKKPKGFAFI 448
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 91 EQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKN 231
E+ E G + L+I NL D TEE++ ++FS G ++K+KN
Sbjct: 721 EEEEESLPGCT-LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKN 766
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 33.9 bits (74), Expect = 0.58
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +1
Query: 43 NKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASEL---- 210
N K QG + E+ ++ +GR L++ NL TEE++ K+FS +G SEL
Sbjct: 379 NTTKSWQGRILG-ENEEEEDLAESGR--LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPI 435
Query: 211 --FLNKEKNFGFI 243
K K F FI
Sbjct: 436 DSLTKKPKGFAFI 448
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 91 EQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKN 231
E+ E G + L+I NL D TEE++ ++FS G ++K+KN
Sbjct: 721 EEEEESLPGCT-LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKN 766
>BC004145-1|AAH04145.2| 291|Homo sapiens TNRC4 protein protein.
Length = 291
Score = 33.9 bits (74), Expect = 0.58
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASE 207
++ ++ + G +L++G L T+E++ KMF PFG E
Sbjct: 75 VKPADSESRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDE 114
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 33.9 bits (74), Expect = 0.58
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +1
Query: 43 NKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASEL---- 210
N K QG + E+ ++ +GR L++ NL TEE++ K+FS +G SEL
Sbjct: 392 NTTKSWQGRILG-ENEEEEDLAESGR--LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPI 448
Query: 211 --FLNKEKNFGFI 243
K K F FI
Sbjct: 449 DSLTKKPKGFAFI 461
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 91 EQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKN 231
E+ E G + L+I NL D TEE++ ++FS G ++K+KN
Sbjct: 734 EEEEESLPGCT-LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKN 779
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 33.5 bits (73), Expect = 0.77
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDV-TEEEIMKMFS 186
K A E +L K L G + D P + +K + ++++G L + TEE+I + F
Sbjct: 117 KDAASVEKVLDQKEHRLDGRVID--PKKAMAMKKDPVKKIFVGGLNPESPTEEKIREYFG 174
Query: 187 PFG--EASEL----FLNKEKNFGFI 243
FG EA EL LNK + F FI
Sbjct: 175 EFGEIEAIELPMDPKLNKRRGFVFI 199
>U69546-1|AAB09040.1| 490|Homo sapiens RNA-binding protein BRUNOL3
protein.
Length = 490
Score = 33.5 bits (73), Expect = 0.77
Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + ++ I++MF PFG ++++F++K+ N FGF+ D
Sbjct: 405 ANLFIYHLPQEFGDQHILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD 454
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L+IG ++ E +I MFSPFG+ E
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEE 136
>U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein.
Length = 482
Score = 33.5 bits (73), Expect = 0.77
Identities = 15/50 (30%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + ++++++MF PFG ++++F++K+ N FGF+ D
Sbjct: 397 ANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYD 446
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 33.5 bits (73), Expect = 0.77
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K ++ + ++ K L G + D + + K ++++G L+ D EE+I + F
Sbjct: 125 KESESVDKVMDQKEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGG 183
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L NK + F FI
Sbjct: 184 FGEVESIELPMDNKTNKRRGFCFI 207
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 33.5 bits (73), Expect = 0.77
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDV-TEEEIMKMFS 186
K A E +L K L G + D P + +K + ++++G L + TEE+I + F
Sbjct: 117 KDAASVEKVLDQKEHRLDGRVID--PKKAMAMKKDPVKKIFVGGLNPESPTEEKIREYFG 174
Query: 187 PFG--EASEL----FLNKEKNFGFI 243
FG EA EL LNK + F FI
Sbjct: 175 EFGEIEAIELPMDPKLNKRRGFVFI 199
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 33.5 bits (73), Expect = 0.77
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K ++ + ++ K L G + D + + K ++++G L+ D EE+I + F
Sbjct: 146 KESESVDKVMDQKEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGG 204
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L NK + F FI
Sbjct: 205 FGEVESIELPMDNKTNKRRGFCFI 228
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.77
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K ++ + ++ K L G + D + + K ++++G L+ D EE+I + F
Sbjct: 55 KESESVDKVMDQKEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGG 113
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L NK + F FI
Sbjct: 114 FGEVESIELPMDNKTNKRRGFCFI 137
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 33.5 bits (73), Expect = 0.77
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K ++ + ++ K L G + D + + K ++++G L+ D EE+I + F
Sbjct: 146 KESESVDKVMDQKEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGG 204
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L NK + F FI
Sbjct: 205 FGEVESIELPMDNKTNKRRGFCFI 228
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 33.5 bits (73), Expect = 0.77
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K ++ + ++ K L G + D + + K ++++G L+ D EE+I + F
Sbjct: 58 KESESVDKVMDQKEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGG 116
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L NK + F FI
Sbjct: 117 FGEVESIELPMDNKTNKRRGFCFI 140
>BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA
binding protein 1 protein.
Length = 483
Score = 33.5 bits (73), Expect = 0.77
Identities = 15/50 (30%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + ++++++MF PFG ++++F++K+ N FGF+ D
Sbjct: 398 ANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYD 447
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 33.5 bits (73), Expect = 0.77
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K ++ + ++ K L G + D + + K ++++G L+ D EE+I + F
Sbjct: 146 KESESVDKVMDQKEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGG 204
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L NK + F FI
Sbjct: 205 FGEVESIELPMDNKTNKRRGFCFI 228
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 33.5 bits (73), Expect = 0.77
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K ++ + ++ K L G + D + + K ++++G L+ D EE+I + F
Sbjct: 146 KESESVDKVMDQKEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGG 204
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L NK + F FI
Sbjct: 205 FGEVESIELPMDNKTNKRRGFCFI 228
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 33.5 bits (73), Expect = 0.77
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K ++ + ++ K L G + D + + K ++++G L+ D EE+I + F
Sbjct: 146 KESESVDKVMDQKEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGG 204
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L NK + F FI
Sbjct: 205 FGEVESIELPMDNKTNKRRGFCFI 228
>AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor
CUG-BP protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.77
Identities = 15/50 (30%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + ++++++MF PFG ++++F++K+ N FGF+ D
Sbjct: 401 ANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYD 450
>AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A
isoform protein.
Length = 483
Score = 33.5 bits (73), Expect = 0.77
Identities = 15/50 (30%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + ++++++MF PFG ++++F++K+ N FGF+ D
Sbjct: 398 ANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYD 447
>AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYLQ
isoform protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.77
Identities = 15/50 (30%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + ++++++MF PFG ++++F++K+ N FGF+ D
Sbjct: 401 ANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYD 450
>AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein
BRUNOL2 protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.77
Identities = 15/50 (30%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + ++++++MF PFG ++++F++K+ N FGF+ D
Sbjct: 401 ANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYD 450
>AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA
binding protein protein.
Length = 509
Score = 33.5 bits (73), Expect = 0.77
Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + ++ I++MF PFG ++++F++K+ N FGF+ D
Sbjct: 424 ANLFIYHLPQEFGDQHILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD 473
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 RLYIGNLTNDVTEEEIMKMFSPFGEASE 207
+L+IG ++ E +I MFSPFG+ E
Sbjct: 128 KLFIGMVSKKCNENDIRVMFSPFGQIEE 155
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 33.5 bits (73), Expect = 0.77
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K ++ + ++ K L G + D + + K ++++G L+ D EE+I + F
Sbjct: 138 KESESVDKVMDQKEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGG 196
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L NK + F FI
Sbjct: 197 FGEVESIELPMDNKTNKRRGFCFI 220
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 33.5 bits (73), Expect = 0.77
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K ++ + ++ K L G + D + + K ++++G L+ D EE+I + F
Sbjct: 127 KESESVDKVMDQKEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGG 185
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L NK + F FI
Sbjct: 186 FGEVESIELPMDNKTNKRRGFCFI 209
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 33.5 bits (73), Expect = 0.77
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K ++ + ++ K L G + D + + K ++++G L+ D EE+I + F
Sbjct: 146 KESESVDKVMDQKEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGG 204
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L NK + F FI
Sbjct: 205 FGEVESIELPMDNKTNKRRGFCFI 228
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 33.5 bits (73), Expect = 0.77
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K ++ + ++ K L G + D + + K ++++G L+ D EE+I + F
Sbjct: 146 KESESVDKVMDQKEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGG 204
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L NK + F FI
Sbjct: 205 FGEVESIELPMDNKTNKRRGFCFI 228
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 33.5 bits (73), Expect = 0.77
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K ++ + ++ K L G + D + + K ++++G L+ D EE+I + F
Sbjct: 146 KESESVDKVMDQKEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGG 204
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L NK + F FI
Sbjct: 205 FGEVESIELPMDNKTNKRRGFCFI 228
>AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein
protein.
Length = 544
Score = 33.5 bits (73), Expect = 0.77
Identities = 15/50 (30%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +1
Query: 121 SRLYIGNLTNDVTEEEIMKMFSPFGE--ASELFLNKEKN----FGFIKMD 252
+ L+I +L + ++++++MF PFG ++++F++K+ N FGF+ D
Sbjct: 459 ANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYD 508
>D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA binding
factor protein.
Length = 271
Score = 33.1 bits (72), Expect = 1.0
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K A + +L K L G L D P ++ ++++G L+ D +EE+I + F
Sbjct: 48 KDAASVDKVLELKEHKLDGKLID-PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGA 106
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L N+ + F FI
Sbjct: 107 FGEIENIELPMDTKTNERRGFCFI 130
>D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein.
Length = 301
Score = 33.1 bits (72), Expect = 1.0
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K A + +L K L G L D P ++ ++++G L+ D +EE+I + F
Sbjct: 78 KDAASVDKVLELKEHKLDGKLID-PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGA 136
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L N+ + F FI
Sbjct: 137 FGEIENIELPMDTKTNERRGFCFI 160
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 88 MEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSPFGEASELFL----NKEKNFGFI 243
M+Q + LY+ NL + + +E + K FSPFG + + + K FGF+
Sbjct: 283 MKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFV 338
Score = 31.9 bits (69), Expect = 2.4
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 354 VKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
VKNL ++N+ LY + FG I V DE G + G G V F +A
Sbjct: 103 VKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAA 151
Score = 30.3 bits (65), Expect = 7.2
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +3
Query: 348 VRVKNLPPFVSNELLYRSFEIFGKIERAYVKVDERGKTLGEGVVEFARKPSA 503
V +KN + +E L F FG V DE GK+ G G V F R A
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDA 244
>CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIK 246
L++ + + TEE+I F+ +GE + LN ++ G++K
Sbjct: 75 LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLK 114
>CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +1
Query: 127 LYIGNLTNDVTEEEIMKMFSPFGEASELFLNKEKNFGFIK 246
L++ + + TEE+I F+ +GE + LN ++ G++K
Sbjct: 75 LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLK 114
>CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein.
Length = 420
Score = 33.1 bits (72), Expect = 1.0
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K A + +L K L G L D P ++ ++++G L+ D +EE+I + F
Sbjct: 197 KDAASVDKVLELKEHKLDGKLID-PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGA 255
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L N+ + F FI
Sbjct: 256 FGEIENIELPMDTKTNERRGFCFI 279
>BC132973-1|AAI32974.1| 1023|Homo sapiens peroxisome
proliferator-activated receptor gamma, coactivator 1 beta
protein.
Length = 1023
Score = 33.1 bits (72), Expect = 1.0
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 297 LRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKV-DERGKTLG 467
+R++R R + V ++NL +S+ L R FE+FG+IE V + RG+ G
Sbjct: 887 IRHARKRREKAIGEGRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYG 944
Score = 30.3 bits (65), Expect = 7.2
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Frame = +1
Query: 61 QGPLFDLPPM----EQSEVKFNGRSRL-YIGNLTNDVTEEEIMKMFSPFGEASE---LFL 216
+GP D P + K G R+ YI NL++D++ E+ + F FGE E L
Sbjct: 877 RGPCSDRTPSIRHARKRREKAIGEGRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTR 936
Query: 217 NKE-KNFGFI 243
N+ + +GFI
Sbjct: 937 NRRGEKYGFI 946
>BC132971-1|AAI32972.1| 1023|Homo sapiens peroxisome
proliferator-activated receptor gamma, coactivator 1 beta
protein.
Length = 1023
Score = 33.1 bits (72), Expect = 1.0
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 297 LRNSRTLRVRFAPHNSAVRVKNLPPFVSNELLYRSFEIFGKIERAYVKV-DERGKTLG 467
+R++R R + V ++NL +S+ L R FE+FG+IE V + RG+ G
Sbjct: 887 IRHARKRREKAIGEGRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYG 944
Score = 30.3 bits (65), Expect = 7.2
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Frame = +1
Query: 61 QGPLFDLPPM----EQSEVKFNGRSRL-YIGNLTNDVTEEEIMKMFSPFGEASE---LFL 216
+GP D P + K G R+ YI NL++D++ E+ + F FGE E L
Sbjct: 877 RGPCSDRTPSIRHARKRREKAIGEGRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTR 936
Query: 217 NKE-KNFGFI 243
N+ + +GFI
Sbjct: 937 NRRGEKYGFI 946
>BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 33.1 bits (72), Expect = 1.0
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 KPAQREEIILSNKLKDLQGPLFDLPPMEQSEVKFNGRSRLYIGNLTNDVTEEEIMKMFSP 189
K A + +L K L G L D P ++ ++++G L+ D +EE+I + F
Sbjct: 197 KDAASVDKVLELKEHKLDGKLID-PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGA 255
Query: 190 FGEASELFL------NKEKNFGFI 243
FGE + L N+ + F FI
Sbjct: 256 FGEIENIELPMDTKTNERRGFCFI 279
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,628,838
Number of Sequences: 237096
Number of extensions: 1964355
Number of successful extensions: 4743
Number of sequences better than 10.0: 353
Number of HSP's better than 10.0 without gapping: 4086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4738
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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