Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0696
(419 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6F439 Cluster: Ribosomal protein L7; n=2; Coelomata|Re... 99 2e-20
UniRef50_UPI0001554D2F Cluster: PREDICTED: hypothetical protein,... 56 3e-07
UniRef50_Q7SBD5 Cluster: 60S ribosomal protein L7; n=5; Eukaryot... 56 3e-07
UniRef50_UPI0000DA2F9D Cluster: PREDICTED: similar to 60S riboso... 52 6e-06
UniRef50_P18124 Cluster: 60S ribosomal protein L7; n=124; Eukary... 52 6e-06
UniRef50_P17937 Cluster: 60S ribosomal protein L7-A; n=3; Ascomy... 51 1e-05
UniRef50_P32100 Cluster: 60S ribosomal protein L7; n=39; Fungi/M... 44 0.002
UniRef50_Q7TP62 Cluster: Ab2-073; n=2; Rattus norvegicus|Rep: Ab... 43 0.003
UniRef50_Q4Q9H4 Cluster: 60S ribosomal protein L7, putative; n=9... 39 0.036
UniRef50_P0C1J2 Cluster: Peptidyl-prolyl isomerase cwc27; n=2; F... 39 0.036
UniRef50_A3F4R1 Cluster: Ribosomal protein L7-like protein; n=1;... 37 0.14
UniRef50_Q6CS71 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 37 0.19
UniRef50_A0DG29 Cluster: Chromosome undetermined scaffold_5, who... 36 0.25
UniRef50_Q12213 Cluster: 60S ribosomal protein L7-B; n=46; Eukar... 36 0.44
UniRef50_Q2NH88 Cluster: Replication factor C large subunit; n=1... 36 0.44
UniRef50_Q01D44 Cluster: RabGAP/TBC domain-containing protein; n... 34 1.0
UniRef50_Q7YY09 Cluster: Putative uncharacterized protein; n=1; ... 34 1.3
UniRef50_A2F592 Cluster: Ribosomal protein L30p/L7e, putative; n... 34 1.3
UniRef50_Q6DKI1 Cluster: Ribosomal protein L7-like 1; n=40; Eute... 34 1.3
UniRef50_Q54ET6 Cluster: Putative uncharacterized protein abpF; ... 33 1.8
UniRef50_Q22XZ0 Cluster: EF hand family protein; n=1; Tetrahymen... 33 1.8
UniRef50_Q55G00 Cluster: Putative uncharacterized protein; n=1; ... 33 2.4
UniRef50_Q2H7R4 Cluster: Predicted protein; n=1; Chaetomium glob... 33 2.4
UniRef50_Q6CK64 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 33 3.1
UniRef50_Q1RPZ9 Cluster: Zinc finger protein; n=1; Ciona intesti... 32 4.1
UniRef50_Q870Y0 Cluster: Related to dna-dependent rna polymerase... 32 4.1
UniRef50_A0DYU8 Cluster: Chromosome undetermined scaffold_7, who... 32 5.4
UniRef50_Q4AHE4 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_UPI0000F1D986 Cluster: PREDICTED: similar to ribosomal ... 31 9.5
UniRef50_A3YGD0 Cluster: Sensor protein; n=1; Marinomonas sp. ME... 31 9.5
UniRef50_O61646 Cluster: Splicing factor SRp54; n=8; Endopterygo... 31 9.5
>UniRef50_Q6F439 Cluster: Ribosomal protein L7; n=2; Coelomata|Rep:
Ribosomal protein L7 - Plutella xylostella (Diamondback
moth)
Length = 213
Score = 99 bits (238), Expect = 2e-20
Identities = 55/103 (53%), Positives = 68/103 (66%)
Frame = +1
Query: 109 PVKGKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRN 288
PVKGKEDSKKLPAV ES LKHRK REALRT+R+QVTLKRR++A+KK++ + + +
Sbjct: 9 PVKGKEDSKKLPAVPESVLKHRKRREALRTRRVQVTLKRRTAALKKRKTIFKRAEAYVKE 68
Query: 289 TASRNVMKSD*PDKHAIVATTTFPGKPNWAFVIRIRGINQVSP 417
R + + PG+ AFVIRIRGINQVSP
Sbjct: 69 YRIRERDEIRLARQARNNGNYYVPGEAKLAFVIRIRGINQVSP 111
>UniRef50_UPI0001554D2F Cluster: PREDICTED: hypothetical protein,
partial; n=2; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein, partial - Ornithorhynchus anatinus
Length = 193
Score = 56.0 bits (129), Expect = 3e-07
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +3
Query: 255 IFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKL 374
I+KRAE Y KEYR R EIR+AR AR GNYYVP E KL
Sbjct: 9 IYKRAEAYHKEYRQMYRREIRMARMARKVGNYYVPAEPKL 48
>UniRef50_Q7SBD5 Cluster: 60S ribosomal protein L7; n=5;
Eukaryota|Rep: 60S ribosomal protein L7 - Neurospora
crassa
Length = 248
Score = 56.0 bits (129), Expect = 3e-07
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +3
Query: 255 IFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKL 374
IFKRAE YVKEYR ER++IRL R A+ G++++P EAKL
Sbjct: 49 IFKRAETYVKEYRDVEREKIRLQRAAKQDGSFHIPAEAKL 88
Score = 33.5 bits (73), Expect = 1.8
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +1
Query: 148 VXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRNTASRNVMKSD*PD 327
V E+ LK RK +E R +R Q ++++ +A K+KR T R+V +
Sbjct: 13 VPETLLKKRKSQEKARAER-QAEIEKKKAANKEKRAVIFKRAETYVKEY-RDVEREKIRL 70
Query: 328 KHAIVATTTF--PGKPNWAFVIRIRGINQVSP 417
+ A +F P + F+IRI+GIN++ P
Sbjct: 71 QRAAKQDGSFHIPAEAKLIFLIRIKGINKIPP 102
>UniRef50_UPI0000DA2F9D Cluster: PREDICTED: similar to 60S ribosomal
protein L7; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L7 - Rattus norvegicus
Length = 389
Score = 51.6 bits (118), Expect = 6e-06
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +3
Query: 255 IFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKL 374
I+++A+ Y KEYR R EIR+AR AR GN+YVP E KL
Sbjct: 283 IYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKL 322
Score = 33.9 bits (74), Expect = 1.3
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +1
Query: 358 PGKPNWAFVIRIRGINQVSP 417
P +P AFVIRIRGIN VSP
Sbjct: 317 PAEPKLAFVIRIRGINGVSP 336
>UniRef50_P18124 Cluster: 60S ribosomal protein L7; n=124;
Eukaryota|Rep: 60S ribosomal protein L7 - Homo sapiens
(Human)
Length = 248
Score = 51.6 bits (118), Expect = 6e-06
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +3
Query: 255 IFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKL 374
I+++A+ Y KEYR R EIR+AR AR GN+YVP E KL
Sbjct: 50 IYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKL 89
Score = 42.3 bits (95), Expect = 0.004
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Frame = +1
Query: 112 VKGKEDSKK-LPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRN 288
++G E+ KK +PAV E+ K R+ L+ KRL+ ++ ++K R + +
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKM--LRKARRKLIYEKAKHYH 58
Query: 289 TASRNVMKSD*PDKHAIVATTTF--PGKPNWAFVIRIRGINQVSP 417
R + +++ F P +P AFVIRIRGIN VSP
Sbjct: 59 KEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSP 103
>UniRef50_P17937 Cluster: 60S ribosomal protein L7-A; n=3;
Ascomycota|Rep: 60S ribosomal protein L7-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 249
Score = 50.8 bits (116), Expect = 1e-05
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +3
Query: 258 FKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKL 374
FKRAE ++ YR +ER+ IRL R A+N+G+ +VP E KL
Sbjct: 51 FKRAETFINNYRQRERERIRLNRSAKNKGDIFVPDETKL 89
>UniRef50_P32100 Cluster: 60S ribosomal protein L7; n=39;
Fungi/Metazoa group|Rep: 60S ribosomal protein L7 -
Drosophila melanogaster (Fruit fly)
Length = 252
Score = 43.6 bits (98), Expect = 0.002
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Frame = +1
Query: 109 PVKGKEDSKKLPAVXESXLKHRKXREALRT----KRLQ----VTLKRRSSAIKKKRESSR 264
PV K +KKLPAV ES LK K + + R +RL+ + L+++ + ++ ++ +
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63
Query: 265 GLNSTSRNTASRNVMKSD*PDKHAIVATTTFPGKPNWAFVIRIRGINQVSP 417
+ + R R + K ++ P + AFV+RIRGIN+V+P
Sbjct: 64 YIKAEQREIKLRRLAKK----RNQFYV----PAEAKLAFVVRIRGINKVAP 106
Score = 43.6 bits (98), Expect = 0.002
Identities = 23/52 (44%), Positives = 32/52 (61%)
Frame = +3
Query: 219 KEAFFCHQEEEGIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKL 374
K A +++E + RAE+Y EY E+ EI+L R A+ R +YVP EAKL
Sbjct: 42 KAAVIALRKKENLV-RAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKL 92
>UniRef50_Q7TP62 Cluster: Ab2-073; n=2; Rattus norvegicus|Rep:
Ab2-073 - Rattus norvegicus (Rat)
Length = 136
Score = 42.7 bits (96), Expect = 0.003
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +3
Query: 255 IFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLGICHPNPWYQ 404
I ++A+ KE R R EIR+AR AR GN Y LG+CH P YQ
Sbjct: 57 ICEKAKHSHKECRQMYRTEIRMARTARRAGNVYA-CRTSLGLCHQTPRYQ 105
>UniRef50_Q4Q9H4 Cluster: 60S ribosomal protein L7, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein L7, putative
- Leishmania major
Length = 252
Score = 39.1 bits (87), Expect = 0.036
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 258 FKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLGI 380
+ RA +Y +EYR E+ + L RQA + GNYY+ + K+ +
Sbjct: 55 YLRARKYSREYRGAEKKLVTLRRQAASHGNYYLEAKPKVAV 95
>UniRef50_P0C1J2 Cluster: Peptidyl-prolyl isomerase cwc27; n=2;
Fungi/Metazoa group|Rep: Peptidyl-prolyl isomerase cwc27
- Rhizopus oryzae (Rhizopus delemar)
Length = 524
Score = 39.1 bits (87), Expect = 0.036
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = +1
Query: 115 KGKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRNTA 294
K +E+ +K E K +K E + K + T + R+SAI+K ++ R L+ TS NT+
Sbjct: 280 KAEEEERKRKKALEEERKRQKEEE--KKKMQENTSESRASAIEKLKQDIRNLSKTSSNTS 337
Query: 295 SRNVMKSD 318
+ K D
Sbjct: 338 DELIPKKD 345
>UniRef50_A3F4R1 Cluster: Ribosomal protein L7-like protein; n=1;
Taenia asiatica|Rep: Ribosomal protein L7-like protein -
Taenia asiatica (Asian tapeworm)
Length = 207
Score = 37.1 bits (82), Expect = 0.14
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 261 KRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKL 374
+ A +++ EY+ + EI L R A+ GN+YVP E KL
Sbjct: 168 EHARKHLVEYKRAAKREISLMRSAQKAGNFYVPAEPKL 205
>UniRef50_Q6CS71 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Saccharomycetaceae|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 255
Score = 36.7 bits (81), Expect = 0.19
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +3
Query: 240 QEEEGIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKL 374
++ I +R Y KEY ER I R+A+ +YYV EAKL
Sbjct: 50 EKRAAILERNAAYQKEYETAERAVIDAKREAKANSSYYVSAEAKL 94
>UniRef50_A0DG29 Cluster: Chromosome undetermined scaffold_5, whole
genome shotgun sequence; n=8; Alveolata|Rep: Chromosome
undetermined scaffold_5, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 329
Score = 36.3 bits (80), Expect = 0.25
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 261 KRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKL 374
K A+ Y EY+ +++ + R+A+ G +YVP E+KL
Sbjct: 133 KTAQAYENEYKAADKNLVDSLRKAKTEGGFYVPAESKL 170
>UniRef50_Q12213 Cluster: 60S ribosomal protein L7-B; n=46;
Eukaryota|Rep: 60S ribosomal protein L7-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 244
Score = 35.5 bits (78), Expect = 0.44
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 255 IFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKL 374
I +R Y KEY ER+ I+ R A+ G+YYV + KL
Sbjct: 44 ILERNAAYQKEYETAERNIIQAKRDAKAAGSYYVEAQHKL 83
>UniRef50_Q2NH88 Cluster: Replication factor C large subunit; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: Replication
factor C large subunit - Methanosphaera stadtmanae
(strain DSM 3091)
Length = 534
Score = 35.5 bits (78), Expect = 0.44
Identities = 24/82 (29%), Positives = 40/82 (48%)
Frame = +1
Query: 112 VKGKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRNT 291
VK K+D+ + + +S K +K ++ TK++ T K +S K K ES + + TS T
Sbjct: 451 VKTKKDTVEDSSKTKSTTKSKKTSKSTPTKKVTKTKKSSNSTTKNKTESPKNSSKTSSKT 510
Query: 292 ASRNVMKSD*PDKHAIVATTTF 357
+ + S +K TT F
Sbjct: 511 SVDDKKTSKKNNKKKSRQTTLF 532
>UniRef50_Q01D44 Cluster: RabGAP/TBC domain-containing protein; n=1;
Ostreococcus tauri|Rep: RabGAP/TBC domain-containing
protein - Ostreococcus tauri
Length = 937
Score = 34.3 bits (75), Expect = 1.0
Identities = 16/46 (34%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = +1
Query: 166 KHRKXREALRT-KRLQVTLKRRSSAIKKKRESSRGLNSTSRNTASR 300
+ + +EAL+ KRL+ TL RRS+A++++R+++ + + S T S+
Sbjct: 666 EENRLQEALQAVKRLESTLTRRSNALERERQTAESVRAISSRTLSQ 711
>UniRef50_Q7YY09 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum|Rep: Putative uncharacterized
protein - Cryptosporidium parvum
Length = 184
Score = 33.9 bits (74), Expect = 1.3
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +1
Query: 109 PVKGKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESS-----RGLN 273
P+K K KK+ +S +K ++ + +++ T ++++A+ K + SS R +
Sbjct: 54 PIKNKNTIKKITKAKDS-VKQSVTKKETKNTQIKNTPAKKTTALSKSKVSSIPSAVRVIK 112
Query: 274 STSRNTASRNVMKSD*PDKHAIVATTT 354
+NT S+ KS P K + TT
Sbjct: 113 KIEKNTTSKPTSKSVKPKKSPVAKLTT 139
>UniRef50_A2F592 Cluster: Ribosomal protein L30p/L7e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein
L30p/L7e, putative - Trichomonas vaginalis G3
Length = 239
Score = 33.9 bits (74), Expect = 1.3
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3
Query: 246 EEGIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAK 371
E I +RA++Y EY + + EI +A G +YVP EAK
Sbjct: 38 EAKIQERAKKYAAEYVSQTKAEIDAENKATAEGAFYVPAEAK 79
>UniRef50_Q6DKI1 Cluster: Ribosomal protein L7-like 1; n=40;
Euteleostomi|Rep: Ribosomal protein L7-like 1 - Homo
sapiens (Human)
Length = 246
Score = 33.9 bits (74), Expect = 1.3
Identities = 26/98 (26%), Positives = 44/98 (44%)
Frame = +1
Query: 121 KEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRNTASR 300
+++ +K+P V E+ LK RK +AL+ + + L + K K + L S ++ +
Sbjct: 3 EQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWRQ 62
Query: 301 NVMKSD*PDKHAIVATTTFPGKPNWAFVIRIRGINQVS 414
K P K + AFV+RI I+ VS
Sbjct: 63 KRDKVRLRRLEVKPHALELPDKHSLAFVVRIERIDGVS 100
>UniRef50_Q54ET6 Cluster: Putative uncharacterized protein abpF; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein abpF - Dictyostelium discoideum
AX4
Length = 2364
Score = 33.5 bits (73), Expect = 1.8
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 124 EDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRNTAS 297
+D KKL + K RK +E KR + LK++ KKK+E + L S + A+
Sbjct: 1963 KDKKKLEKEEKQREKERKQKEKEDKKREKEELKKKEKEEKKKKEEEKKLKKKSGSEAT 2020
>UniRef50_Q22XZ0 Cluster: EF hand family protein; n=1; Tetrahymena
thermophila SB210|Rep: EF hand family protein -
Tetrahymena thermophila SB210
Length = 1529
Score = 33.5 bits (73), Expect = 1.8
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 261 KRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLGICHPNPWYQPS 410
K A QY KE++ K R+E+ + Q R + NY +K + N + PS
Sbjct: 655 KNANQYGKEFKQKLREELSRSSQERRQANYEDLSSSKYNDSYSNYRHSPS 704
>UniRef50_Q55G00 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 537
Score = 33.1 bits (72), Expect = 2.4
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 115 KGKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKK--RESSRGLNSTSRN 288
K KE ++ E + K +E + K ++++K + +K+ +E+ + LNS N
Sbjct: 245 KLKEKETEIEKDKEKEKEKEKEKEKDKDKEKEISIKNNNDKKQKEIGKETDKKLNSDIEN 304
Query: 289 TASRNVMKSD*PDKHAIVATTTFPGKP 369
+ N +K ++ TTT P P
Sbjct: 305 KNNSNGIKQISKEETTTTTTTTTPSSP 331
>UniRef50_Q2H7R4 Cluster: Predicted protein; n=1; Chaetomium
globosum|Rep: Predicted protein - Chaetomium globosum
(Soil fungus)
Length = 319
Score = 33.1 bits (72), Expect = 2.4
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +1
Query: 118 GKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKK--RESSRGLNSTSRNT 291
GK+DSK P + + + + K RS + ++K R R +S S+
Sbjct: 15 GKKDSKVPPEILHQFGRAILSYSLKKLSEQKAPSKSRSQSSRRKSSRSKPREPSSASKRG 74
Query: 292 ASRNVMKSD*PDKHAIVA 345
+SR++ +SD D HA+V+
Sbjct: 75 SSRDLPRSDSGDMHALVS 92
>UniRef50_Q6CK64 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 984
Score = 32.7 bits (71), Expect = 3.1
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 130 SKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESS 261
S LP V + R+ R+ L+ + Q LKRR ++ K KRE S
Sbjct: 417 STSLPLVLSEEKRKREERKQLKQRERQERLKRRMTSKKSKREHS 460
>UniRef50_Q1RPZ9 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 1034
Score = 32.3 bits (70), Expect = 4.1
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 115 KGKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRNT 291
K K +++K P E K RK R + L+ K++S IK+KR+ S+NT
Sbjct: 474 KEKHENRKSPKELEQEKKARKRRLDYLEEELEKLRKQQSDLIKRKRKQKGDHELMSQNT 532
>UniRef50_Q870Y0 Cluster: Related to dna-dependent rna polymerase I
subunit a43; n=2; Sordariales|Rep: Related to
dna-dependent rna polymerase I subunit a43 - Neurospora
crassa
Length = 448
Score = 32.3 bits (70), Expect = 4.1
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 115 KGKEDSKKLPAVXESXLKHRKXR-EALRTKRLQVTLKRRSSAIKKKRES 258
+ +E+++++PAV ++ KH+K + E+L T+ KR + K K E+
Sbjct: 23 RSREEAEEVPAVEDAPKKHKKSKSESLETETTDKKAKRSKKSKKSKLEA 71
>UniRef50_A0DYU8 Cluster: Chromosome undetermined scaffold_7, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_7, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1346
Score = 31.9 bits (69), Expect = 5.4
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 112 VKGKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRNT 291
+K E ++ V E+ + +K RE +T + +K +S KR+SS+ N +
Sbjct: 825 IKVPEKVQEKQDVRENREEEQKSREK-KTSESDIEIKDKSKHKSNKRQSSKDKNENQKAK 883
Query: 292 ASRNVMKSD*PDK 330
+ R K+D DK
Sbjct: 884 SKRKDSKNDEKDK 896
>UniRef50_Q4AHE4 Cluster: Putative uncharacterized protein; n=1;
Chlorobium phaeobacteroides BS1|Rep: Putative
uncharacterized protein - Chlorobium phaeobacteroides
BS1
Length = 892
Score = 31.5 bits (68), Expect = 7.2
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Frame = +1
Query: 154 ESXLKHRKXREAL--RTKRLQVTLKRRSSAIK-----KKRESSRGLNSTSRN 288
E L HRK R+ R K ++ L R A++ KKRESS G N +RN
Sbjct: 793 EEDLVHRKFRQETIERQKEIETRLLRSKEAMQEREKEKKRESSEGKNRQNRN 844
>UniRef50_UPI0000F1D986 Cluster: PREDICTED: similar to ribosomal
protein L7; n=1; Danio rerio|Rep: PREDICTED: similar to
ribosomal protein L7 - Danio rerio
Length = 100
Score = 31.1 bits (67), Expect = 9.5
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 124 EDSKKLPAVXESXLKHRKXREALRTKRL-QVTLKRRSSAIKKK 249
E KK+P+V ES LK R+ A+R RL + +++S + +K
Sbjct: 4 ETKKKIPSVPESLLKRRQRFAAIRAVRLKKAKADKKASKVTRK 46
>UniRef50_A3YGD0 Cluster: Sensor protein; n=1; Marinomonas sp.
MED121|Rep: Sensor protein - Marinomonas sp. MED121
Length = 486
Score = 31.1 bits (67), Expect = 9.5
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 219 KEAFFCHQEEEGIFKRAEQYV-KEYRIKERDEIRLARQARNRGNY 350
++A+F E G F E +EY I+E DE R+A+ A N GNY
Sbjct: 134 EDAYF--DSESGDFMLDEDSDWEEYDIQESDEFRIAQLALNDGNY 176
>UniRef50_O61646 Cluster: Splicing factor SRp54; n=8;
Endopterygota|Rep: Splicing factor SRp54 - Drosophila
melanogaster (Fruit fly)
Length = 513
Score = 31.1 bits (67), Expect = 9.5
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 115 KGKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRNTA 294
+GK S+ S +HR+ R R + RSS + KR SR STSR+ +
Sbjct: 332 RGKHSSRSRSK--RSRSRHRRSSSRSRRSRSRGGKHSRSSRSRGKRSRSRHRRSTSRSRS 389
Query: 295 SRN 303
SR+
Sbjct: 390 SRS 392
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 326,196,763
Number of Sequences: 1657284
Number of extensions: 4768178
Number of successful extensions: 14527
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 14050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14485
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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