Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0696
(419 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003139-2|AAB54165.1| 244|Caenorhabditis elegans Ribosomal pro... 50 9e-07
U41106-1|AAA82409.1| 347|Caenorhabditis elegans Hypothetical pr... 29 1.4
AF068716-7|AAC17746.1| 384|Caenorhabditis elegans Hypothetical ... 29 1.8
AF016425-8|AAD34667.2| 239|Caenorhabditis elegans Hypothetical ... 29 1.8
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 28 2.4
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 28 2.4
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 28 2.4
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 28 2.4
Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical pr... 27 4.1
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 5.5
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 5.5
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 5.5
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 5.5
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 27 7.2
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 27 7.2
U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical p... 27 7.2
U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z50858-5|CAA90722.1| 534|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z47811-3|CAA87787.2| 723|Caenorhabditis elegans Hypothetical pr... 26 9.5
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 26 9.5
U13074-1|AAA96982.1| 534|Caenorhabditis elegans steroid hormone... 26 9.5
AF489839-1|AAN09795.1| 723|Caenorhabditis elegans lim and trans... 26 9.5
AF273840-1|AAG15187.1| 553|Caenorhabditis elegans sex-1 protein. 26 9.5
AF049869-1|AAC77795.1| 556|Caenorhabditis elegans SEX-1 protein. 26 9.5
>AF003139-2|AAB54165.1| 244|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 7 protein.
Length = 244
Score = 49.6 bits (113), Expect = 9e-07
Identities = 20/39 (51%), Positives = 31/39 (79%)
Frame = +3
Query: 258 FKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKL 374
FKRAE+YV+EYR +++ +RL R+A +G++YVP E K+
Sbjct: 47 FKRAEKYVQEYRNAQKEGLRLKREAEAKGDFYVPAEHKV 85
Score = 46.8 bits (106), Expect = 6e-06
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Frame = +1
Query: 130 SKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRNTAS-RNV 306
+KK+P V E+ LK RK R RTK Q + + A K K + ++ + RN
Sbjct: 4 TKKVPQVPETVLKRRKQRADARTKAAQ---HKVTVAAKNKEKKTQYFKRAEKYVQEYRNA 60
Query: 307 MKSD*PDKHAIVATTTF--PGKPNWAFVIRIRGINQVSP 417
K K A F P + AFV+RIRGINQ+ P
Sbjct: 61 QKEGLRLKREAEAKGDFYVPAEHKVAFVVRIRGINQLHP 99
>U41106-1|AAA82409.1| 347|Caenorhabditis elegans Hypothetical
protein W06A11.4 protein.
Length = 347
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 241 KKKRESSRGLNSTSRNTASRNVMKSD*PDKHAIVATTTFPGKPN 372
KK+R+ SR SR ASR +K K A +T P +PN
Sbjct: 21 KKRRKMSRKFTKKSRKRASRASIKLANEQKAKKYANSTVPMEPN 64
>AF068716-7|AAC17746.1| 384|Caenorhabditis elegans Hypothetical
protein F26D11.2 protein.
Length = 384
Score = 28.7 bits (61), Expect = 1.8
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +1
Query: 112 VKGKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRNT 291
+K E ++ A E LK RK + K + K+R A+KK+RE SR L T
Sbjct: 246 IKNAEKEARI-AEMEKILKRRKAQ----LKERRSARKQRELAMKKRRE-SRKLRITKIQD 299
Query: 292 ASRNVMKS 315
SR+V +S
Sbjct: 300 DSRSVRRS 307
>AF016425-8|AAD34667.2| 239|Caenorhabditis elegans Hypothetical
protein F59A7.5a protein.
Length = 239
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +1
Query: 169 HRKXREALR----TKRLQVTLKRRSSAIKKKRESSRGLNSTSRNTASRNVMKSD*PDKHA 336
HRK + A + TK+ +VT K+ KKK + + +T+R+T P
Sbjct: 126 HRKKKGATKKKVTTKKKKVTTKKPKKTTKKKLTTKKLATTTTRSTTKHRQFPDQRPPLQP 185
Query: 337 IVATTTFPGKPN 372
+ T PG P+
Sbjct: 186 V--TEQKPGYPD 195
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 352 TFPGKPNWAFVIRIRGINQV 411
TFP +PN +V+++R NQV
Sbjct: 1873 TFPAEPNQRWVVKLRATNQV 1892
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 352 TFPGKPNWAFVIRIRGINQV 411
TFP +PN +V+++R NQV
Sbjct: 1873 TFPAEPNQRWVVKLRATNQV 1892
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 352 TFPGKPNWAFVIRIRGINQV 411
TFP +PN +V+++R NQV
Sbjct: 1873 TFPAEPNQRWVVKLRATNQV 1892
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 352 TFPGKPNWAFVIRIRGINQV 411
TFP +PN +V+++R NQV
Sbjct: 1873 TFPAEPNQRWVVKLRATNQV 1892
>Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical
protein T01E8.5 protein.
Length = 1270
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 8/49 (16%)
Frame = +1
Query: 220 KRRSSAIKKKRESSRGLNST--------SRNTASRNVMKSD*PDKHAIV 342
KRR ++KR SSR +S+ +R+T+S +MK + P K+A +
Sbjct: 172 KRRKKERRRKRSSSRSSSSSRSRDRSSRARDTSSHTLMKMNKPAKYAFL 220
>Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical
protein T01E8.5 protein.
Length = 1270
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 8/49 (16%)
Frame = +1
Query: 220 KRRSSAIKKKRESSRGLNST--------SRNTASRNVMKSD*PDKHAIV 342
KRR ++KR SSR +S+ +R+T+S +MK + P K+A +
Sbjct: 172 KRRKKERRRKRSSSRSSSSSRSRDRSSRARDTSSHTLMKMNKPAKYAFL 220
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +1
Query: 109 PVKGKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRN 288
PVK +D K P E + + + A TK+ + K + +K + + +S ++
Sbjct: 1780 PVKMADDEVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKK 1839
Query: 289 TASRNVMKSD*PDK 330
T + KS P+K
Sbjct: 1840 TGDESKEKS--PEK 1851
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +1
Query: 109 PVKGKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRN 288
PVK +D K P E + + + A TK+ + K + +K + + +S ++
Sbjct: 1780 PVKMADDEVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKK 1839
Query: 289 TASRNVMKSD*PDK 330
T + KS P+K
Sbjct: 1840 TGDESKEKS--PEK 1851
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +1
Query: 109 PVKGKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRN 288
PVK +D K P E + + + A TK+ + K + +K + + +S ++
Sbjct: 1780 PVKMADDEVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKK 1839
Query: 289 TASRNVMKSD*PDK 330
T + KS P+K
Sbjct: 1840 TGDESKEKS--PEK 1851
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +1
Query: 109 PVKGKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRN 288
PVK +D K P E + + + A TK+ + K + +K + + +S ++
Sbjct: 1780 PVKMADDEVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKK 1839
Query: 289 TASRNVMKSD*PDK 330
T + KS P+K
Sbjct: 1840 TGDESKEKS--PEK 1851
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 121 KEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESS 261
K++ KK P S LK R+ RTKR + K++ A +KK++ +
Sbjct: 376 KKEDKKKPMGWMSTLKME--RDERRTKRKEEEEKKKKDAEEKKKKDA 420
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 408 LVDTTDSDDKCPIWLPRERSSCHDCVLVW 322
+VDT + C LP +R SC+D +L W
Sbjct: 1721 IVDTGALPELC--MLPEQRGSCYDNILRW 1747
>U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical
protein C45G9.4 protein.
Length = 292
Score = 26.6 bits (56), Expect = 7.2
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 7/59 (11%)
Frame = +1
Query: 214 TLKRRSSAIKKKRESSRGL-------NSTSRNTASRNVMKSD*PDKHAIVATTTFPGKP 369
T RRSS KKR+S +GL T R+ S K P K A P KP
Sbjct: 27 TKPRRSSKTSKKRKSKKGLFGCCAKKRKTKRSKKSAKRTKRSAPKKAPKKAPMKAPSKP 85
>U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical
protein C45G9.9 protein.
Length = 294
Score = 26.6 bits (56), Expect = 7.2
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 7/59 (11%)
Frame = +1
Query: 214 TLKRRSSAIKKKRESSRGL-------NSTSRNTASRNVMKSD*PDKHAIVATTTFPGKP 369
T RRSS KKR+S +GL T R+ S K P K A P KP
Sbjct: 27 TKPRRSSKTSKKRKSKKGLFGCCAKKRKTKRSKKSAKRTKRSAPKKAPKKAPMKAPSKP 85
>Z50858-5|CAA90722.1| 534|Caenorhabditis elegans Hypothetical
protein F44A6.2 protein.
Length = 534
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 249 EGIFKRAEQYVKEYRIKERDEIRLARQARNRGNY 350
+G F+R+ Q +YR ++ + R++RNR Y
Sbjct: 172 KGFFRRSIQRKIDYRCLKQQVCEIKRESRNRCQY 205
>Z47811-3|CAA87787.2| 723|Caenorhabditis elegans Hypothetical
protein K02C4.4 protein.
Length = 723
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +1
Query: 115 KGKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRNTA 294
KG+ + KK + + +K K E L TKR + + + + ++ + L SR+
Sbjct: 187 KGQSNMKKDDLIRQLTIKREKKLETLHTKRKERERHQTAELVDRQAKEMLELFKASRSEY 246
Query: 295 S 297
S
Sbjct: 247 S 247
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 26.2 bits (55), Expect = 9.5
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +1
Query: 112 VKGKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRNT 291
+K K+D KK + E KH R+KR + +R +KKRE + S T
Sbjct: 411 LKEKKDRKKKKS--EKKRKHHSKSRKHRSKRSESREERHRRRKEKKREKKKKRRRRSSTT 468
Query: 292 A 294
+
Sbjct: 469 S 469
>U13074-1|AAA96982.1| 534|Caenorhabditis elegans steroid hormone
receptor familymember CNR14 protein.
Length = 534
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 249 EGIFKRAEQYVKEYRIKERDEIRLARQARNRGNY 350
+G F+R+ Q +YR ++ + R++RNR Y
Sbjct: 172 KGFFRRSIQRKIDYRCLKQQVCEIKRESRNRCQY 205
>AF489839-1|AAN09795.1| 723|Caenorhabditis elegans lim and
transglutaminase domainprotein protein.
Length = 723
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +1
Query: 115 KGKEDSKKLPAVXESXLKHRKXREALRTKRLQVTLKRRSSAIKKKRESSRGLNSTSRNTA 294
KG+ + KK + + +K K E L TKR + + + + ++ + L SR+
Sbjct: 187 KGQSNMKKDDLIRQLTIKREKKLETLHTKRKERERHQTAELVDRQAKEMLELFKASRSEY 246
Query: 295 S 297
S
Sbjct: 247 S 247
>AF273840-1|AAG15187.1| 553|Caenorhabditis elegans sex-1 protein.
Length = 553
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 249 EGIFKRAEQYVKEYRIKERDEIRLARQARNRGNY 350
+G F+R+ Q +YR ++ + R++RNR Y
Sbjct: 169 KGFFRRSIQRKIDYRCLKQQVCEIKRESRNRCQY 202
>AF049869-1|AAC77795.1| 556|Caenorhabditis elegans SEX-1 protein.
Length = 556
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 249 EGIFKRAEQYVKEYRIKERDEIRLARQARNRGNY 350
+G F+R+ Q +YR ++ + R++RNR Y
Sbjct: 172 KGFFRRSIQRKIDYRCLKQQVCEIKRESRNRCQY 205
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,525,247
Number of Sequences: 27780
Number of extensions: 115253
Number of successful extensions: 412
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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