Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0694
(676 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118870-1|AAM50730.1| 235|Drosophila melanogaster GM27569p pro... 113 3e-25
AE013599-1113|AAF58784.1| 235|Drosophila melanogaster CG11761-P... 113 3e-25
AY392453-1|AAQ84213.1| 89|Drosophila melanogaster translin pro... 92 7e-19
BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p pro... 36 0.051
AY069344-1|AAL39489.2| 985|Drosophila melanogaster LD05471p pro... 36 0.051
AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein. 36 0.051
AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-P... 36 0.051
AL138972-4|CAB72287.1| 435|Drosophila melanogaster EG:BACR25B3.... 31 1.4
AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF... 31 1.4
AY113617-1|AAM29622.1| 359|Drosophila melanogaster RH65663p pro... 30 2.5
AE014297-4194|AAF56759.1| 359|Drosophila melanogaster CG12259-P... 30 2.5
>AY118870-1|AAM50730.1| 235|Drosophila melanogaster GM27569p
protein.
Length = 235
Score = 113 bits (271), Expect = 3e-25
Identities = 58/136 (42%), Positives = 76/136 (55%)
Frame = +2
Query: 257 ARLLFEKAHDGYARLKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMA 436
AR E Y +L + VP Y++Y DHW F+TQR ++IAL I+LE G L + ET+A
Sbjct: 62 ARKQVELCAQKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVA 121
Query: 437 EILGVSPVELKEGFHLDIEDYLIGY*RCAQNCLVWXXXXXXXXXXXXXXXXXXXXWNXNA 616
E+LG+ + EGFHLD+EDYL+G + A + + N
Sbjct: 122 EMLGLK-ISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNT 180
Query: 617 GFRLLNLKNDHLRKRF 664
GFRLLNLKND LRKRF
Sbjct: 181 GFRLLNLKNDGLRKRF 196
Score = 59.3 bits (137), Expect = 5e-09
Identities = 25/52 (48%), Positives = 39/52 (75%)
Frame = +3
Query: 99 IFSDFQKNLDQEQELRETIRTICKEVDQISREATTVLQVIHYNEAGIAPACG 254
IFS++QK +D EQE+RE IR + +E++ +S+EA LQ+IH + + I+ ACG
Sbjct: 9 IFSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHSDLSQISAACG 60
>AE013599-1113|AAF58784.1| 235|Drosophila melanogaster CG11761-PA
protein.
Length = 235
Score = 113 bits (271), Expect = 3e-25
Identities = 58/136 (42%), Positives = 76/136 (55%)
Frame = +2
Query: 257 ARLLFEKAHDGYARLKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMA 436
AR E Y +L + VP Y++Y DHW F+TQR ++IAL I+LE G L + ET+A
Sbjct: 62 ARKQVELCAQKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVA 121
Query: 437 EILGVSPVELKEGFHLDIEDYLIGY*RCAQNCLVWXXXXXXXXXXXXXXXXXXXXWNXNA 616
E+LG+ + EGFHLD+EDYL+G + A + + N
Sbjct: 122 EMLGLK-ISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNT 180
Query: 617 GFRLLNLKNDHLRKRF 664
GFRLLNLKND LRKRF
Sbjct: 181 GFRLLNLKNDGLRKRF 196
Score = 59.3 bits (137), Expect = 5e-09
Identities = 25/52 (48%), Positives = 39/52 (75%)
Frame = +3
Query: 99 IFSDFQKNLDQEQELRETIRTICKEVDQISREATTVLQVIHYNEAGIAPACG 254
IFS++QK +D EQE+RE IR + +E++ +S+EA LQ+IH + + I+ ACG
Sbjct: 9 IFSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHSDLSQISAACG 60
>AY392453-1|AAQ84213.1| 89|Drosophila melanogaster translin
protein.
Length = 89
Score = 91.9 bits (218), Expect = 7e-19
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +2
Query: 257 ARLLFEKAHDGYARLKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMA 436
AR E Y +L + VP Y++Y DHW F+TQR ++IAL I+LE G L + ET+A
Sbjct: 4 ARKQVELCAQKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVA 63
Query: 437 EILGVSPVELKEGFHLDIEDYLIG 508
E+LG+ + EGFHLD+EDYL+G
Sbjct: 64 EMLGLK-ISQSEGFHLDVEDYLLG 86
>BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p
protein.
Length = 1190
Score = 35.9 bits (79), Expect = 0.051
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +3
Query: 30 NKIKEPRLLIKH-VKMCDNELINKIFSDFQKNLDQEQELRETIRTICKE-VDQISREATT 203
NK+KE L +H + MC+N L + FQ+N + +E+RE ++T+ ++ +D ++ T+
Sbjct: 722 NKMKENLDLRQHELTMCENRLAQ---TTFQQNQAEIEEMRERVKTLEQQIIDSREKQKTS 778
Query: 204 VLQVIHYNEAGIAPACG 254
+++ EA +A A G
Sbjct: 779 QAKIVDI-EAKLADAKG 794
>AY069344-1|AAL39489.2| 985|Drosophila melanogaster LD05471p
protein.
Length = 985
Score = 35.9 bits (79), Expect = 0.051
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +3
Query: 30 NKIKEPRLLIKH-VKMCDNELINKIFSDFQKNLDQEQELRETIRTICKE-VDQISREATT 203
NK+KE L +H + MC+N L + FQ+N + +E+RE ++T+ ++ +D ++ T+
Sbjct: 517 NKMKENLDLRQHELTMCENRLAQ---TTFQQNQAEIEEMRERVKTLEQQIIDSREKQKTS 573
Query: 204 VLQVIHYNEAGIAPACG 254
+++ EA +A A G
Sbjct: 574 QAKIVDI-EAKLADAKG 589
>AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein.
Length = 1179
Score = 35.9 bits (79), Expect = 0.051
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +3
Query: 30 NKIKEPRLLIKH-VKMCDNELINKIFSDFQKNLDQEQELRETIRTICKE-VDQISREATT 203
NK+KE L +H + MC+N L + FQ+N + +E+RE ++T+ ++ +D ++ T+
Sbjct: 711 NKMKENLDLRQHELTMCENRLAQ---TTFQQNQAEIEEMRERVKTLEQQIIDSREKQKTS 767
Query: 204 VLQVIHYNEAGIAPACG 254
+++ EA +A A G
Sbjct: 768 QAKIVDI-EAKLADAKG 783
>AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-PA
protein.
Length = 1179
Score = 35.9 bits (79), Expect = 0.051
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +3
Query: 30 NKIKEPRLLIKH-VKMCDNELINKIFSDFQKNLDQEQELRETIRTICKE-VDQISREATT 203
NK+KE L +H + MC+N L + FQ+N + +E+RE ++T+ ++ +D ++ T+
Sbjct: 711 NKMKENLDLRQHELTMCENRLAQ---TTFQQNQAEIEEMRERVKTLEQQIIDSREKQKTS 767
Query: 204 VLQVIHYNEAGIAPACG 254
+++ EA +A A G
Sbjct: 768 QAKIVDI-EAKLADAKG 783
>AL138972-4|CAB72287.1| 435|Drosophila melanogaster EG:BACR25B3.2
protein.
Length = 435
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 69 KMCDNELINKIFSDFQKNLDQEQELRETIRTI 164
K+ D++L N S+++ N D+EQE+R T+ +
Sbjct: 194 KLLDDDLRNFFHSNYEGNDDEEQEIRSTLERV 225
>AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF,
isoform F protein.
Length = 4629
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 69 KMCDNELINKIFSDFQKNLDQEQELRETIRTI 164
K+ D++L N S+++ N D+EQE+R T+ +
Sbjct: 253 KLLDDDLRNFFHSNYEGNDDEEQEIRSTLERV 284
>AY113617-1|AAM29622.1| 359|Drosophila melanogaster RH65663p
protein.
Length = 359
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 33 KIKEPRLLIKHVKMCDNELINKIFSDFQKNLDQEQELRETIR 158
+IKE L IK K+C N ++ F ++ +QE LRE +R
Sbjct: 156 EIKEDILPIKKKKICKNPDVDTSFLPDREREEQENRLREQLR 197
>AE014297-4194|AAF56759.1| 359|Drosophila melanogaster CG12259-PA
protein.
Length = 359
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 33 KIKEPRLLIKHVKMCDNELINKIFSDFQKNLDQEQELRETIR 158
+IKE L IK K+C N ++ F ++ +QE LRE +R
Sbjct: 156 EIKEDILPIKKKKICKNPDVDTSFLPDREREEQENRLREQLR 197
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,037,310
Number of Sequences: 53049
Number of extensions: 558169
Number of successful extensions: 1538
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1531
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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