Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0694
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99283-5|CAE46680.1| 308|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z99283-4|CAB16534.1| 342|Caenorhabditis elegans Hypothetical pr... 29 3.0
AC091125-2|AAK27887.2| 202|Caenorhabditis elegans Hypothetical ... 29 3.0
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 28 7.0
Z73976-2|CAA98285.1| 360|Caenorhabditis elegans Hypothetical pr... 27 9.2
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 27 9.2
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 27 9.2
AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical ... 27 9.2
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 27 9.2
AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z99283-5|CAE46680.1| 308|Caenorhabditis elegans Hypothetical
protein Y70C5C.6b protein.
Length = 308
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +1
Query: 475 FPFGH*RLSDWVLTMCSELSRLAVNSVTRGDYERPLRISKFVMELXRRLQAIELEERSFA 654
F G+ +SD L MC ++ ++ + + +R ++F + L LQ IE E+ F
Sbjct: 224 FDNGYSNISDNCLEMCRDIQKVILKELRNYQIDRNFHENRFFVAL-EALQIIERGEKKFM 282
Query: 655 QTL 663
+ +
Sbjct: 283 EEM 285
>Z99283-4|CAB16534.1| 342|Caenorhabditis elegans Hypothetical
protein Y70C5C.6a protein.
Length = 342
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +1
Query: 475 FPFGH*RLSDWVLTMCSELSRLAVNSVTRGDYERPLRISKFVMELXRRLQAIELEERSFA 654
F G+ +SD L MC ++ ++ + + +R ++F + L LQ IE E+ F
Sbjct: 258 FDNGYSNISDNCLEMCRDIQKVILKELRNYQIDRNFHENRFFVAL-EALQIIERGEKKFM 316
Query: 655 QTL 663
+ +
Sbjct: 317 EEM 319
>AC091125-2|AAK27887.2| 202|Caenorhabditis elegans Hypothetical
protein Y67D2.5 protein.
Length = 202
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 42 EPRLLIKHVKMCDNELINKIFSDFQKNLDQEQELRETIR 158
EP + K+ K +NE I ++ Q +LD+E E+++T R
Sbjct: 20 EPCHVAKYHKWMENEEIRRLTGSEQLSLDEEYEMQKTWR 58
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 69 KMCDNELINKIFSDFQKNLDQEQELRE--TIRTICKEVD 179
KM D E K D QKN+DQEQE E T + KE D
Sbjct: 3719 KMWDEE--EKEEQDQQKNMDQEQEAAEDQTDEMVAKEDD 3755
>Z73976-2|CAA98285.1| 360|Caenorhabditis elegans Hypothetical
protein T07C12.6 protein.
Length = 360
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 382 YQITVALGHESPVILILEVIGWWYSIFQSCVSIV 281
+ ITVALG+ +I IL G+W IF +S++
Sbjct: 179 FSITVALGNLFEIIGILAFNGFW--IFTGAISVI 210
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 39 KEPRLLIKHVKMCDNELINKIFSDFQKNL 125
++PRL KH+ +C + K+ SDF+K +
Sbjct: 70 QDPRLSFKHLNVCATNITLKV-SDFRKKI 97
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 336 YLK*SVGGTASFSLAYPSWAFSKSRRACHM 247
+LK + GT FSL S + SK R ACH+
Sbjct: 2627 FLKPLLPGTYQFSLQIKSQSDSKIRSACHV 2656
>AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical
protein M01B12.4b protein.
Length = 644
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 129 QEQELRETIRTICKEVDQISREATTVLQVIHYNEAGIAP 245
+++E+ + E QI+ EAT + H+NE +AP
Sbjct: 334 EQEEITVAPEAVVAEEQQIAPEATPTVIEEHHNEVTVAP 372
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 129 QEQELRETIRTICKEVDQISREATTVLQVIHYNEAGIAP 245
+++E+ + E QI+ EAT + H+NE +AP
Sbjct: 324 EQEEITVAPEAVVAEEQQIAPEATPTVIEEHHNEVTVAP 362
>AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical
protein M01B12.4a protein.
Length = 634
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 129 QEQELRETIRTICKEVDQISREATTVLQVIHYNEAGIAP 245
+++E+ + E QI+ EAT + H+NE +AP
Sbjct: 324 EQEEITVAPEAVVAEEQQIAPEATPTVIEEHHNEVTVAP 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,508,055
Number of Sequences: 27780
Number of extensions: 289196
Number of successful extensions: 827
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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