Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0691
         (506 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0660 - 19286653-19287271,19287791-19287916,19288016-192882...    30   0.93 
02_03_0394 + 18546089-18546323,18546784-18546986,18547598-185477...    29   1.6  
04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202     28   3.7  

>09_04_0660 -
           19286653-19287271,19287791-19287916,19288016-19288221,
           19288417-19288549,19288632-19288713,19288906-19289035,
           19289187-19289279,19289391-19289510,19289594-19289660,
           19290079-19290137,19290719-19290943
          Length = 619

 Score = 30.3 bits (65), Expect = 0.93
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +2

Query: 359 YSHQXAPXTEELDTVEKDLEDTMNILHITRLNWENAYIQGYTLYTQHL 502
           YS+         DT+ KDL++   + HI  + + N YI  +  +TQ +
Sbjct: 312 YSNYQPGSLNTTDTLIKDLDNIDIVFHIGDITYANGYISQWDQFTQQV 359


>02_03_0394 +
           18546089-18546323,18546784-18546986,18547598-18547787,
           18548624-18549015,18549495-18550055
          Length = 526

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +1

Query: 391 AGYSGERSGGHNEHLTHHQAQLGERLYPRVHSL 489
           AG  GER GG+ +   HHQ Q      PRV  L
Sbjct: 44  AGRHGERGGGYPDLHHHHQQQQLPMAAPRVEKL 76


>04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202
          Length = 711

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 406 ERSGGHNEHLTHHQAQLGERLYPRV 480
           ER+ GH  H  HHQ+  G  L  R+
Sbjct: 426 ERAHGHRSHRDHHQSSRGSTLSSRL 450


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,301,280
Number of Sequences: 37544
Number of extensions: 187199
Number of successful extensions: 524
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)