Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0691
         (506 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   1.4  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   4.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   5.6  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   5.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   5.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.7  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -1

Query: 101 YTSVEGSCDAASFTG-FISERNLDAIYSQWR 12
           Y S+E   D+A F G FI+E NL      WR
Sbjct: 167 YDSIEAR-DSAIFDGDFITENNLPLGLEVWR 196


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 115 LQMKNCLPLNPQL 153
           L +K+ LPLNP+L
Sbjct: 4   LSLKDILPLNPKL 16


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +2

Query: 344 VDARPYSHQXAPXTEELDTVEKDLEDTMNILHITRLNWENAYIQGYT 484
           V  R Y        +E   + KD+ + M  +  T  N E   +QG T
Sbjct: 349 VGVRTYLESELAKAKERPKLRKDMYEKMVQVDPTAPNAEERRVQGVT 395


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +2

Query: 344 VDARPYSHQXAPXTEELDTVEKDLEDTMNILHITRLNWENAYIQGYT 484
           V  R Y        +E   + KD+ + M  +  T  N E   +QG T
Sbjct: 264 VGVRTYLESELAKAKERPKLRKDMYEKMVQVDPTAPNAEERRVQGVT 310


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +2

Query: 344 VDARPYSHQXAPXTEELDTVEKDLEDTMNILHITRLNWENAYIQGYT 484
           V  R Y        +E   + KD+ + M  +  T  N E   +QG T
Sbjct: 583 VGVRTYLESELAKAKERPKLRKDMYEKMVQVDPTAPNAEERRVQGVT 629


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 465  PISKGTLSTPNI 500
            P+S G LS PNI
Sbjct: 980  PLSLGALSVPNI 991


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 493 GVESVPLDIGVLPIEPG 443
           G + +P+    LP EPG
Sbjct: 440 GTKDIPISACSLPCEPG 456


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 493 GVESVPLDIGVLPIEPG 443
           G + +P+    LP EPG
Sbjct: 530 GTKDIPISACSLPCEPG 546


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,921
Number of Sequences: 438
Number of extensions: 1703
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)