Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0689
         (562 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64844-12|AAB18312.4|  417|Caenorhabditis elegans Hypothetical p...    27   7.0  
AL110487-11|CAC42369.1|  624|Caenorhabditis elegans Hypothetical...    27   9.2  
AL110487-10|CAC42368.1|  623|Caenorhabditis elegans Hypothetical...    27   9.2  
AL110487-9|CAB54435.1|  626|Caenorhabditis elegans Hypothetical ...    27   9.2  

>U64844-12|AAB18312.4|  417|Caenorhabditis elegans Hypothetical
           protein T22F3.10 protein.
          Length = 417

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 20  MQKLIIFALVVLCVGSEAKTFTRCGLVH 103
           M  L  F L + C+G  +  F +CG++H
Sbjct: 309 MLSLSFFILTMCCIGVNSGGFYKCGVLH 336


>AL110487-11|CAC42369.1|  624|Caenorhabditis elegans Hypothetical
           protein Y39E4B.12c protein.
          Length = 624

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +2

Query: 119 GFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYW 253
           GF+  L  NW  + E +    T   +  R+ +   GLF I+ +Y+
Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKKYF 363


>AL110487-10|CAC42368.1|  623|Caenorhabditis elegans Hypothetical
           protein Y39E4B.12b protein.
          Length = 623

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +2

Query: 119 GFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYW 253
           GF+  L  NW  + E +    T   +  R+ +   GLF I+ +Y+
Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKKYF 363


>AL110487-9|CAB54435.1|  626|Caenorhabditis elegans Hypothetical
           protein Y39E4B.12a protein.
          Length = 626

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +2

Query: 119 GFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYW 253
           GF+  L  NW  + E +    T   +  R+ +   GLF I+ +Y+
Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKKYF 363


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,950,633
Number of Sequences: 27780
Number of extensions: 229152
Number of successful extensions: 606
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)