Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0687
(623 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0959 + 29692740-29693035,29693102-29693267,29693433-296936... 43 2e-04
02_05_0444 - 29073740-29073844,29074417-29074725,29077910-290779... 42 5e-04
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 40 0.001
03_03_0186 + 15243150-15243563,15243685-15243777,15244604-152446... 39 0.004
04_04_0917 - 29404341-29404519,29404610-29404744,29404898-294052... 34 0.11
03_05_0169 + 21474655-21474771,21474879-21474971,21475553-214756... 34 0.11
09_01_0155 - 2301903-2302151,2302334-2302491,2302651-2302819,230... 33 0.18
09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,995... 32 0.43
04_04_1163 - 31398565-31398654,31398729-31398812,31398893-313990... 32 0.43
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 31 0.98
05_03_0017 - 7392742-7393110,7393212-7393319,7393522-7394079,739... 30 1.3
04_04_0251 + 23930789-23930960,23931065-23931128,23931641-239317... 30 1.3
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 30 1.7
06_03_0711 + 23798998-23799106,23799838-23799957,23800181-238003... 30 1.7
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 30 1.7
02_01_0754 - 5595813-5595887,5595973-5596071,5596136-5596327,559... 30 1.7
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044... 30 1.7
11_06_0562 + 25003246-25003746,25004975-25005214,25005576-250060... 29 2.3
06_03_1286 - 29000688-29001526,29001982-29002075,29002480-290025... 29 2.3
06_03_1258 + 28796643-28798169 29 2.3
02_04_0067 - 19425019-19425288,19425393-19425647,19425766-194259... 29 2.3
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117... 29 3.0
01_05_0660 - 24071523-24071780,24071873-24072127,24072209-240723... 29 3.0
06_01_0876 - 6712224-6712812,6713777-6715233 29 4.0
02_05_0330 - 27996080-27996757,27996836-27997366,27998124-27998303 29 4.0
10_08_0300 - 16617956-16618510 28 5.2
08_02_1014 - 23586552-23587224,23587402-23587463,23587735-235879... 28 5.2
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 28 5.2
07_03_1756 - 29239137-29239325,29239741-29240259,29240693-292408... 28 5.2
07_03_0955 + 22867448-22868248 28 5.2
06_03_1259 - 28800954-28802468 28 5.2
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621... 28 5.2
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 28 6.9
11_01_0737 + 6211149-6211466,6212022-6212183,6212290-6213101,621... 28 6.9
08_02_1043 + 23906340-23906412,23906525-23906631,23906727-239068... 28 6.9
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 28 6.9
04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865... 28 6.9
02_05_0315 - 27822379-27823899 28 6.9
02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592... 28 6.9
11_06_0184 - 21006659-21009823 27 9.2
10_08_0489 + 18269824-18270270,18271659-18271948,18272341-182725... 27 9.2
08_02_0657 - 19749835-19751942,19753123-19753561 27 9.2
07_03_0607 + 19916946-19917479,19917543-19918010,19918092-199184... 27 9.2
06_03_1386 + 29816744-29816941,29817030-29817330,29817421-298175... 27 9.2
04_04_0918 - 29411239-29411373,29412276-29412526,29412772-294130... 27 9.2
02_05_0752 + 31491462-31491921,31492177-31492271,31492346-314925... 27 9.2
02_05_0497 - 29502012-29502101,29502128-29502197,29502302-295024... 27 9.2
02_03_0113 - 15381289-15381556,15381633-15381985,15382184-153822... 27 9.2
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606... 27 9.2
01_06_0058 - 26056334-26056630,26057063-26057365,26057748-260578... 27 9.2
>04_04_0959 + 29692740-29693035,29693102-29693267,29693433-29693612,
29693703-29693771,29693888-29694088,29694187-29694240,
29694325-29694386,29694488-29694620,29694789-29694899,
29695008-29695104,29695638-29695714,29696129-29696194,
29696431-29696583,29697392-29697447,29697524-29697584,
29697656-29697766,29698010-29698144,29698217-29698447,
29699001-29699075,29699161-29699282,29699381-29699453,
29699538-29699642,29699728-29699895,29700079-29700148,
29700224-29700375,29700574-29700651,29700744-29700836,
29700961-29701098,29701237-29701276,29701350-29701423,
29701777-29701911,29702345-29702464,29702778-29702939
Length = 1287
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1
Query: 334 DESQLNAYKFALTKEFAVIQGPPGTGKTFLGVKIASTLLRNLSLEGTPMLIICYTNHALI 513
++ Q + +K K++A+I G PGTGKT+ V +LL + G +L+ YTN A+
Sbjct: 870 NDQQRSLHKILAAKDYALILGMPGTGKTYTMVHAVKSLL----MRGESILLTSYTNSAID 925
Query: 514 N 516
N
Sbjct: 926 N 926
>02_05_0444 -
29073740-29073844,29074417-29074725,29077910-29077981,
29078541-29078633,29078825-29078982,29079247-29079415,
29080204-29081241,29081632-29081759,29081926-29081985,
29082033-29083077
Length = 1058
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 301 PDLWPDESIGLDESQLNAYKFALTKE--FAVIQGPPGTGKTFLGVKIASTLLRNLSLEGT 474
PD E LD SQL A L K+ +IQGPPGTGKT L + ++R + +G
Sbjct: 462 PDPRISERYALDASQLKALSLGLNKKRPVLIIQGPPGTGKTVL---LTELIVRAVQ-QGE 517
Query: 475 PMLIICYTNHALIN 516
+L+ +N A+ N
Sbjct: 518 NVLVTAPSNAAVDN 531
>07_03_0471 +
18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +1
Query: 331 LDESQLNAYKFALTKEFAVIQGPPGTGKTFLGVKIASTLLRNLSLEGTPMLIICYTNHAL 510
L+ SQ+ A K L K ++IQGPPGTGKT ++ ++ +++ +G +++C ++
Sbjct: 513 LNASQVLAVKSVLQKPISLIQGPPGTGKTV----TSAAIVYHMAKQGQGQVLVCAPSNVA 568
Query: 511 IN 516
++
Sbjct: 569 VD 570
>03_03_0186 + 15243150-15243563,15243685-15243777,15244604-15244666,
15245028-15245114,15245197-15245349,15245422-15245579,
15246458-15246692,15246782-15246892,15246942-15246968,
15247269-15248327,15248432-15248692,15249011-15249196,
15249642-15250793,15250886-15251236,15251343-15251738
Length = 1581
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 322 SIGLDESQLNAYKFALTKEFAVIQGPPGTGKTFLGVKIASTLLRNLSLEGTPMLIICYTN 501
S+ +Q+ A + ++ GPPGTGKT V+I + L N + T LII ++N
Sbjct: 880 SVRFTPTQIGAIISGIQPGLTMVVGPPGTGKTDTAVQILNVLYHNCPSQRT--LIITHSN 937
Query: 502 HAL 510
AL
Sbjct: 938 QAL 940
>04_04_0917 -
29404341-29404519,29404610-29404744,29404898-29405225,
29405313-29405532,29405653-29406647,29407233-29407493,
29407534-29407872,29409309-29409497
Length = 881
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +1
Query: 319 ESIGLDESQLNAYKFALT------KEFAVIQGPPGTGKTFLGVKIASTLLRNLSLEGTPM 480
E + L+ SQLNA ++ +I GPPGTGKT K ST+L + ++G
Sbjct: 287 EKLNLNASQLNAVADCVSVMENQLSSLKLIWGPPGTGKT----KTISTILWAMLIKGRKT 342
Query: 481 LIICYTNHALI 513
L TN +++
Sbjct: 343 LTCAPTNTSIL 353
>03_05_0169 +
21474655-21474771,21474879-21474971,21475553-21475642,
21475728-21475811,21476088-21476252,21476995-21477182,
21477363-21477435,21477766-21477819,21478019-21478276,
21478891-21479097,21479293-21479396,21479809-21479953,
21480108-21480242,21480610-21480783
Length = 628
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 331 LDESQLNAYKFAL-TKEFAVIQGPPGTGKTFLGVKIASTLLRNLSLEGTPMLIICYTNHA 507
LDESQ +A AL +++ ++ GPPGTGKT I +L+ + G+ +L +N A
Sbjct: 179 LDESQKDAISKALRSRDVFLLHGPPGTGKT---TTIIEIILQEVK-RGSKILACAASNIA 234
Query: 508 LIN 516
+ N
Sbjct: 235 VDN 237
>09_01_0155 -
2301903-2302151,2302334-2302491,2302651-2302819,
2303796-2304839,2305792-2306075,2306318-2307333,
2307937-2308085
Length = 1022
Score = 33.1 bits (72), Expect = 0.18
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 334 DESQLNAYKFALTKE--FAVIQGPPGTGKTFLGVKIASTLLRNLSLEGTPMLIICYTNHA 507
D SQL A L + +IQGPPGTGKT L S L+ +G +L+ +N A
Sbjct: 547 DASQLKAITLGLNNKRPVLIIQGPPGTGKTGL----LSYLIACAVRKGERVLVTAPSNAA 602
Query: 508 LIN 516
+ N
Sbjct: 603 VDN 605
>09_02_0501 -
9955987-9956244,9956329-9956583,9956713-9956884,
9957000-9957227,9959102-9959235,9959319-9959402,
9959539-9959829,9960076-9960405,9960526-9960668,
9960970-9961126,9961210-9961313,9961423-9961583,
9961664-9961980,9962094-9962375,9962471-9962772,
9962848-9962938,9963262-9963338,9963428-9963587,
9963682-9963766,9963838-9963949,9964864-9964943,
9968644-9968981
Length = 1386
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 385 VIQGPPGTGKTFLGVKIASTLLRNLSLEGTPMLIICYTNHAL 510
++ GPPG+GKT L + +A TL + + GT I Y H +
Sbjct: 180 LLLGPPGSGKTSLLMALAGTLPSTVKVSGT----ITYNGHTM 217
>04_04_1163 -
31398565-31398654,31398729-31398812,31398893-31399037,
31399118-31399239,31399338-31399376,31399491-31399601,
31399682-31399804,31399946-31400032,31400136-31400207,
31400349-31400621,31400704-31400895,31400988-31401171,
31401339-31401480,31401578-31401821,31401959-31402603,
31403024-31403293
Length = 940
Score = 31.9 bits (69), Expect = 0.43
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 385 VIQGPPGTGKTFLGVKIASTLLRN-LSLEGTPMLIICYTNHA 507
++ GPPGTGKT L +A+ N LS++G P LI Y +
Sbjct: 694 LLYGPPGTGKTLLAKAVATECSLNFLSVKG-PELINMYVGES 734
>01_03_0179 +
13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 373 KEFAVIQGPPGTGKTFLGVKIASTLLRNLSLEGTPMLIICYTNHAL 510
+ ++ GPPG+GKT L + +A L NL + G + Y H +
Sbjct: 229 RRMTLLLGPPGSGKTTLLLALAGKLEDNLKVSGK----VTYNGHGM 270
>05_03_0017 -
7392742-7393110,7393212-7393319,7393522-7394079,
7394186-7394311,7394396-7394521,7394673-7395137,
7396822-7396901,7397394-7397664
Length = 700
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 355 YKFALTKEFAVIQGPPGTGKTFLGVKIASTLLRNLSLEGTPML 483
Y +A+ I GP G+GK+ L ++ L RN+ L G +L
Sbjct: 63 YGYAVPGRVVAIMGPSGSGKSTLLDALSGRLARNVLLTGKVLL 105
>04_04_0251 +
23930789-23930960,23931065-23931128,23931641-23931747,
23931832-23931899,23932068-23932097,23932357-23932460,
23932558-23932662,23932815-23932904,23932982-23933057,
23933292-23933361,23933799-23933869,23933945-23934035,
23934192-23934319,23934547-23934675,23934762-23934902
Length = 481
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 385 VIQGPPGTGKTFLGVKIASTLLRNLSLEGTPMLIICYTNHALINSW 522
++ GPPGTGKT L +A L + +I H+L + W
Sbjct: 220 LLHGPPGTGKTSLCKALAQKLSIRFKSRYSMCQLIEVNAHSLFSKW 265
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 358 KFALTKEFAVI-QGPPGTGKTFLGVKIASTLLRN-LSLEGTPMLIICY 495
KF ++ V+ GPPG GKT L IA+ N +S++G +L + +
Sbjct: 520 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 567
>06_03_0711 +
23798998-23799106,23799838-23799957,23800181-23800317,
23800418-23800579,23800707-23800793,23800872-23800958,
23801317-23801454,23802023-23802214,23802287-23802385,
23802490-23802564
Length = 401
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 385 VIQGPPGTGKTFLGVKIASTLLRN 456
++ GPPGTGKT L IAS + N
Sbjct: 179 LLYGPPGTGKTLLARAIASNIDAN 202
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 358 KFALTKEFAVI-QGPPGTGKTFLGVKIASTLLRN-LSLEGTPMLIICY 495
KF ++ V+ GPPG GKT L IA+ N +S++G +L + +
Sbjct: 511 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 558
>02_01_0754 -
5595813-5595887,5595973-5596071,5596136-5596327,
5596992-5597129,5597415-5597501,5597583-5597669,
5597795-5597956,5598089-5598225,5598483-5598602,
5600668-5600773
Length = 400
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 385 VIQGPPGTGKTFLGVKIASTLLRN 456
++ GPPGTGKT L IAS + N
Sbjct: 178 LLYGPPGTGKTLLARAIASNIDAN 201
>01_05_0662 -
24103475-24103735,24103831-24104085,24104280-24104451,
24104535-24104762,24104864-24104997,24105101-24105184,
24105273-24105563,24105660-24105992,24106081-24106334,
24106435-24106591,24106674-24106777,24106879-24107039,
24107216-24107529,24107614-24107895,24107991-24108292,
24108367-24108457,24108566-24108619,24108785-24108861,
24108963-24109207,24109322-24109410,24110811-24111254
Length = 1443
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 373 KEFAVIQGPPGTGKTFLGVKIASTLLRNLSLEGTPMLIICYTNHAL 510
+ ++ GPPG+GKT L + +A L ++L + G + Y H +
Sbjct: 177 RRMTLLLGPPGSGKTTLLLALAGKLDKDLKVSGK----VTYNGHGM 218
>11_06_0562 +
25003246-25003746,25004975-25005214,25005576-25006097,
25006184-25007248,25007350-25007656,25007761-25008001,
25008104-25008302,25008771-25008852,25008959-25009209,
25010061-25010219,25010220-25010603
Length = 1316
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 337 ESQLNAYKFALTKEFAVIQGPPGTGKTFLGVKIASTL 447
+S ++A K +IQGPPG+GKT + + + L
Sbjct: 452 KSIISAVHCRSNKHIELIQGPPGSGKTEITIALLQVL 488
>06_03_1286 -
29000688-29001526,29001982-29002075,29002480-29002581,
29002638-29002710,29003747-29003804,29003859-29003904,
29003985-29004111,29004198-29004273,29004348-29004405,
29004490-29004588,29004679-29004807,29005333-29005454,
29005567-29005735,29005829-29005929,29006082-29006208,
29006284-29006373,29006516-29006602,29006703-29006963,
29007029-29007058
Length = 895
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 92 YLMVESEVFFEPYHRVLKVLQNSRPDELPMKKYIVDVDNETQPP 223
YL ++V EPY VLK LQ+S P P+++ ++ E P
Sbjct: 67 YLSTRADVLPEPYINVLKQLQDSLPPR-PLEEVRGTIEKELGKP 109
>06_03_1258 + 28796643-28798169
Length = 508
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 289 PVLRPDLWPDESIGLDESQLNAYKFALTKEFAVIQGPPGTGKTFLGVKIASTL 447
P LR D+ D + + A K ++ GPPGTGKT L IA+ L
Sbjct: 236 PALRDDIRADLLRFVRSREHYARAGRAWKRGYLLHGPPGTGKTSLVAAIANLL 288
>02_04_0067 -
19425019-19425288,19425393-19425647,19425766-19425937,
19426069-19426302,19426523-19426656,19427663-19427746,
19428355-19428645,19428788-19429120,19429317-19429390,
19429464-19429644,19429993-19430096,19430232-19430392,
19430727-19431040,19431583-19431864,19432431-19432732,
19433176-19433266,19433368-19433421,19438917-19438993,
19439081-19439240,19439410-19439494,19439574-19440130
Length = 1404
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 385 VIQGPPGTGKTFLGVKIASTLLRNLSLEG 471
++ GPPG GKT L + +A L +NL + G
Sbjct: 189 LLLGPPGCGKTTLLLALAGKLDKNLKVTG 217
>10_01_0097 -
1171949-1172047,1172520-1172591,1172791-1172949,
1172998-1173381,1173478-1175253,1175329-1175452,
1176859-1177027,1177131-1177226,1177339-1177527,
1177965-1179303
Length = 1468
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +1
Query: 379 FAVIQGPPGTGKT 417
F ++QGPPGTGKT
Sbjct: 710 FTLVQGPPGTGKT 722
>01_05_0660 -
24071523-24071780,24071873-24072127,24072209-24072380,
24072458-24072685,24072785-24072918,24073005-24073088,
24073231-24073521,24073599-24073931,24074016-24074266,
24074354-24074620,24074707-24074867,24074978-24075294,
24075386-24075667,24075753-24076054,24076147-24076237,
24076326-24076379,24076497-24076573,24076700-24076859,
24077129-24077213,24077421-24077630,24077736-24078097
Length = 1457
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 373 KEFAVIQGPPGTGKTFLGVKIASTLLRNLSLEGTPMLIICYTNHAL 510
+ ++ GPPG+GKT L + +A L ++L G + Y H +
Sbjct: 190 RRMTLLLGPPGSGKTTLLLALAGRLGKDLKASGK----VTYNGHGM 231
>06_01_0876 - 6712224-6712812,6713777-6715233
Length = 681
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 364 ALTKEFAVIQGPPGTGKTFLGVKIA 438
A T + ++ GPPGTGKT L IA
Sbjct: 246 ARTPKGVLLVGPPGTGKTLLAKAIA 270
>02_05_0330 - 27996080-27996757,27996836-27997366,27998124-27998303
Length = 462
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 385 VIQGPPGTGKTFLGVKIASTLLRNLSLEGTPMLIICYTNHALI 513
+I GPPGTGKT K STLL + ++ L TN A++
Sbjct: 289 LIWGPPGTGKT----KTISTLLWAMLVKNHRTLTCAPTNTAVV 327
>10_08_0300 - 16617956-16618510
Length = 184
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = -3
Query: 297 QDWELYFFSTPWFGLAYRVSEFKYLGG*VSLSTSTMYFFMGSSSG 163
Q W Y+ + WF + ++ F L G + ++ + G SG
Sbjct: 52 QPWSPYYRQSAWFASRFHLATFAALAGALGVAAKASAAYHGGRSG 96
>08_02_1014 -
23586552-23587224,23587402-23587463,23587735-23587950,
23588125-23588209,23589232-23589389,23589505-23589625,
23590081-23590243,23590330-23590415,23590660-23590742,
23590816-23591677,23593266-23593693
Length = 978
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -1
Query: 443 VEAILTPKNVFPVPGGPWMTANSLVKANLYAFN*DSSRPIDSS 315
V ++LT V PVPGG +T NS +A+ A +S+P + S
Sbjct: 359 VPSVLTVDKVSPVPGGRSVTPNSSKRADNIAER--NSKPSEKS 399
>08_02_0520 -
18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 373 KEFAVIQGPPGTGKTFLGVKIASTLLRNLSLEG 471
+ ++ GPPG+GKT L + +A L +L + G
Sbjct: 228 RRMTLLLGPPGSGKTTLLLALAGKLGSDLKVSG 260
>07_03_1756 -
29239137-29239325,29239741-29240259,29240693-29240800,
29240856-29241155,29241730-29241831,29243042-29243209,
29243878-29243991,29244184-29244288,29244372-29244502,
29244794-29244918,29245001-29245172,29245277-29245316,
29245636-29245722,29245803-29245868,29246412-29246510,
29246714-29246836,29247066-29247107,29247195-29247260,
29247362-29247553,29247672-29247737,29248839-29249141
Length = 1038
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 388 IQGPPGTGKTFLGVKIASTLLR 453
+ GPPG GKT +G IA L R
Sbjct: 466 LSGPPGVGKTSIGRSIARALNR 487
>07_03_0955 + 22867448-22868248
Length = 266
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +1
Query: 292 VLRPDLWPDESIGLDESQLNAYKFALTKEFAVIQGPPGTGKTFLGVKIASTLLRNLSLEG 471
+L P+L P + ++QL+ + ++ P G TF ASTLLR L
Sbjct: 28 LLLPNLLPSAATAASDAQLHHFHLPALPSPITVRTLPSLGLTFQLWPSASTLLR--VLPA 85
Query: 472 TPMLI 486
+P+L+
Sbjct: 86 SPLLL 90
>06_03_1259 - 28800954-28802468
Length = 504
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 385 VIQGPPGTGKTFLGVKIASTL 447
++ GPPGTGKT L IA+ L
Sbjct: 259 LLHGPPGTGKTSLVAAIANLL 279
>01_05_0659 -
24061318-24061575,24061664-24061918,24062001-24062172,
24062258-24062381,24062442-24062485,24063601-24063734,
24063822-24063905,24064100-24064390,24064713-24065045,
24065145-24065389,24065644-24065910,24065997-24066157,
24066253-24066569,24066665-24066946,24067024-24067325,
24067398-24067488,24067796-24067849,24067963-24068039,
24068159-24068318,24068653-24068737,24069029-24069238,
24069344-24069732
Length = 1444
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 373 KEFAVIQGPPGTGKTFLGVKIASTLLRNLSLEG 471
+ ++ GPPG+GKT L + +A L +++ G
Sbjct: 199 RRMTLLLGPPGSGKTTLLLALAGRLGKDIKFSG 231
>11_06_0557 -
24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 385 VIQGPPGTGKTFLGVKIASTLLRNLSL 465
++ GPPGTGKT L +A +L NL L
Sbjct: 432 LVWGPPGTGKTRLAAGLAICML-NLRL 457
>11_01_0737 +
6211149-6211466,6212022-6212183,6212290-6213101,
6213188-6213395,6214157-6214364,6214752-6215206,
6215585-6216011,6216391-6216471,6216571-6216761,
6216855-6216998
Length = 1001
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +1
Query: 334 DESQLNAYKFALTKEFAVIQGPPGTGKTFLGVKIASTLLRNLSLEGTPMLIICY 495
D+ L K L ++ GPPGTGKT L A NL P +I Y
Sbjct: 425 DQIGLQRVKDNLWYRGILLSGPPGTGKTSLATSCAYDEGVNLFTINGPEIISQY 478
>08_02_1043 +
23906340-23906412,23906525-23906631,23906727-23906846,
23907174-23907353,23907508-23907666,23907751-23907920,
23907971-23908165,23908536-23908888,23909047-23909223,
23910402-23910466
Length = 532
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = -2
Query: 271 YTLVRFGVSRIRVQISWWLSFIVHIHNVFLHGKL 170
Y L + G++ +R+ + WW+++ + F+ G L
Sbjct: 226 YFLSKNGINAVRIPVGWWIAYDPNPPAPFVSGSL 259
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 274 EEIQFPVLRPDLWPDESIGLDESQLNAYKFALTKEFAVIQGPPGTGKTFLGVKIA 438
E I+ P+ P+L+ ES+G+ + + ++ GPPGTGKT L +A
Sbjct: 202 EVIELPIKHPELF--ESLGIAQPK-----------GVLLYGPPGTGKTLLARAVA 243
>04_04_1035 +
30283456-30283536,30284823-30285359,30285508-30286512,
30286718-30287042,30287563-30287818,30287901-30288117,
30288743-30289095,30289330-30289833,30291267-30292467,
30292614-30292970,30293258-30293495,30294083-30295125,
30295234-30296649,30296731-30296855,30297036-30297314,
30297352-30297382,30298957-30299022,30299447-30299689,
30299848-30299898,30299980-30300071,30300182-30300249,
30300515-30300600,30300720-30300824,30300994-30301127,
30302403-30302436,30302620-30302892,30303019-30303288,
30303384-30303974,30304065-30304214
Length = 3376
Score = 27.9 bits (59), Expect = 6.9
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Frame = +1
Query: 322 SIGLDESQLNAYKFALTKE-------FAVIQGPPGTGKTFLGVKIASTLLRNLSLEGTPM 480
SI L++SQ++A + ++ +I GPPGTGKT K S LL L+
Sbjct: 220 SINLNQSQVDAIESVISAVQCRHLNLMKLIWGPPGTGKT----KTVSALLWALACLKCRT 275
Query: 481 LIICYTNHALI 513
L TN A++
Sbjct: 276 LTCAPTNVAIV 286
>02_05_0315 - 27822379-27823899
Length = 506
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 433 IASTLLRNLSLEGTP--MLIICYTNHALINSWRDCSL 537
+A+TLLR L + P +L I YT HA+++S C L
Sbjct: 15 LAATLLRYLIILIVPFTVLYILYTLHAILSSTPSCPL 51
>02_01_0789 -
5919271-5919411,5920105-5920215,5920303-5920401,
5920486-5920642,5920774-5920937,5921017-5921079,
5921153-5921377,5922038-5922135,5923283-5923499
Length = 424
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 274 EEIQFPVLRPDLWPDESIGLDESQLNAYKFALTKEFAVIQGPPGTGKTFLGVKIA 438
E I+ P+ P+L+ ES+G+ + + ++ GPPGTGKT L +A
Sbjct: 180 EVIELPIKHPELF--ESLGIAQPK-----------GVLLYGPPGTGKTLLARAVA 221
>11_06_0184 - 21006659-21009823
Length = 1054
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -2
Query: 385 RRTLWSKRICMHLTEIRLGLLIHLAIGLVARL 290
RR LWS+++C+H++ R +L + +V +L
Sbjct: 367 RRGLWSQQLCLHVSVHRPPILSEITKVMVEKL 398
>10_08_0489 +
18269824-18270270,18271659-18271948,18272341-18272512,
18272608-18272730,18272832-18272960,18273061-18273255,
18273384-18273470,18273563-18273835,18274047-18274154,
18274769-18275116
Length = 723
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 388 IQGPPGTGKTFLGVKIASTLLRNLSLEGTPML 483
+ GP G+GK+ L +A L N L+GT +L
Sbjct: 106 LMGPSGSGKSTLLDALAGRLAANAFLDGTVLL 137
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 385 VIQGPPGTGKTFLGVKIAS 441
++ GPPGTGKT L IA+
Sbjct: 253 LLYGPPGTGKTLLARAIAA 271
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 394 GPPGTGKTFLGVKIASTLLRN-LSLEGTPMLIICY 495
GPPG GKT + IA N +S++G +L + +
Sbjct: 530 GPPGCGKTMMAKAIAKECKANFISIKGPELLTMWF 564
>07_03_0607 +
19916946-19917479,19917543-19918010,19918092-19918479,
19919025-19919076,19919294-19919333
Length = 493
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 385 VIQGPPGTGKTFLGVKIASTLLRNL 459
++ GPPGTGK+ L +A+ L NL
Sbjct: 228 LLHGPPGTGKSSLVAAMANQLRFNL 252
>06_03_1386 +
29816744-29816941,29817030-29817330,29817421-29817579,
29818916-29819211,29819534-29819761
Length = 393
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 385 VIQGPPGTGKTFLGVKIA 438
++ GPPGTGKT L IA
Sbjct: 123 LLYGPPGTGKTMLAKAIA 140
>04_04_0918 -
29411239-29411373,29412276-29412526,29412772-29413009,
29413133-29414251,29414540-29415106
Length = 769
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 370 TKEFAVIQGPPGTGKT 417
+ F++I GPPGTGKT
Sbjct: 238 SSSFSLIWGPPGTGKT 253
>02_05_0752 +
31491462-31491921,31492177-31492271,31492346-31492573,
31493070-31493157,31493275-31493326,31493985-31494050,
31494382-31494536,31494633-31494703,31494820-31495017,
31495103-31495144,31496223-31496324,31496514-31496603,
31496708-31496783,31497299-31497395,31497488-31497557,
31497676-31497852,31498156-31498239,31498971-31499093,
31500143-31500226,31500318-31500502,31500592-31500730,
31500841-31500900,31500969-31501040,31501136-31501197,
31501839-31501945,31501984-31502058,31502800-31503248
Length = 1168
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 394 GPPGTGKTFLGVKIASTLLRN-LSLEGTPM 480
GPPGTGKT L +A+ N +S+ G+ +
Sbjct: 726 GPPGTGKTLLAKALATEAGANFISITGSTL 755
>02_05_0497 -
29502012-29502101,29502128-29502197,29502302-29502411,
29502530-29502641,29503341-29503498,29503592-29503807,
29504127-29504354,29504722-29504801,29504886-29505056,
29505179-29505281,29505369-29505551,29506313-29506813,
29506935-29507100,29507517-29507566,29508047-29508127,
29508291-29508398,29508874-29508939,29509053-29509109,
29509442-29509507,29509917-29510006,29510850-29510975,
29511681-29511717,29512192-29512250,29512562-29512615,
29513294-29513428,29513542-29513612,29513720-29513957
Length = 1141
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 385 VIQGPPGTGKTFLGVKIASTLLRNLSLEGTPMLIICYTNHALINSW 522
VI G PG + GV+ +R L +E P L+ ++ L +SW
Sbjct: 843 VISGTPGPFRIINGVRRPIPFIRLLEVELYPTLLSKARSYGLSDSW 888
>02_03_0113 -
15381289-15381556,15381633-15381985,15382184-15382231,
15382260-15382439,15382835-15382954
Length = 322
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 137 VLKVLQNSRPDELPMKKYIVDV 202
V K++ NSR D LP K +++DV
Sbjct: 54 VAKLIVNSRTDSLPEKLHLIDV 75
>02_02_0009 +
6068260-6068591,6068797-6068917,6069034-6069122,
6069207-6069291,6069421-6069580,6069667-6069743,
6069848-6069898,6069979-6070069,6070167-6070468,
6070549-6070830,6070911-6071388,6071457-6071560,
6071647-6071809,6071895-6072017,6072099-6072217,
6072304-6072636,6072713-6073003,6073088-6073171,
6073260-6073393,6073478-6073705,6073795-6073966,
6074062-6074316,6074408-6074668
Length = 1444
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 382 AVIQGPPGTGKTFLGVKIASTLLRNLSLEG 471
+++ GPPG+GKT L + +A L L + G
Sbjct: 183 SLLLGPPGSGKTSLLLALAGKLDSTLKVSG 212
>01_06_0058 - 26056334-26056630,26057063-26057365,26057748-26057891,
26057947-26058702,26058844-26059088,26059177-26060079,
26060163-26060225,26060537-26061025,26061211-26061291,
26061801-26061956,26062371-26062416
Length = 1160
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = +1
Query: 301 PDLWPDESIGLDESQLNAYKFALTKEFAVIQGPPGTGKTFL 423
PD DE +NA A F V GP GTGKTFL
Sbjct: 1016 PDQLNDEQRSAFNKIMNAVGSAQGSVFFV-DGPGGTGKTFL 1055
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,221,060
Number of Sequences: 37544
Number of extensions: 357987
Number of successful extensions: 1041
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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