Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0685
(666 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0934 - 12513810-12513834,12513918-12513970,12514212-125145... 131 6e-31
03_05_0125 - 21039767-21039791,21039876-21039922,21040220-210405... 130 1e-30
07_03_1639 + 28305801-28305958,28306240-28306249 37 0.013
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 33 0.15
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 33 0.15
07_03_0435 + 18182657-18183509,18184477-18184574,18184663-181848... 30 1.4
04_04_1687 - 35365766-35366356,35367137-35368135 29 4.4
03_02_0050 + 5272471-5274861 29 4.4
04_03_0266 + 13648287-13649099,13649186-13649524 28 5.8
10_06_0028 - 9802362-9802475,9802919-9803090,9803167-9803208,980... 28 7.7
07_03_0441 + 18256103-18258076 28 7.7
04_03_0227 + 12979635-12980363,12980439-12980474,12980604-129808... 28 7.7
02_02_0421 - 10042184-10042197,10042442-10042822,10044158-100442... 28 7.7
>03_02_0934 -
12513810-12513834,12513918-12513970,12514212-12514525,
12514608-12514730,12515710-12515821
Length = 208
Score = 131 bits (316), Expect = 6e-31
Identities = 57/82 (69%), Positives = 71/82 (86%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
M SLKLQKRLAASV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 191 ARVRKNTEARRKGRHCGFGKRK 256
+R R+ EA++KGRH G+GKR+
Sbjct: 61 SRARRAHEAKQKGRHSGYGKRR 82
Score = 102 bits (244), Expect = 3e-22
Identities = 54/110 (49%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = +1
Query: 208 HRGT*KGSSLWLW*EKGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMK 387
H KG +GT AR+P K LW AKKID+H+YH +YMK
Sbjct: 67 HEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMK 126
Query: 388 AKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARR--NKVRRHASAAR 531
KGN+FKNKRVLME IH+ KAEKAR K LSDQ EA+R +K R AR
Sbjct: 127 VKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKIAR 176
>03_05_0125 -
21039767-21039791,21039876-21039922,21040220-21040533,
21040613-21040735,21041599-21041710
Length = 206
Score = 130 bits (313), Expect = 1e-30
Identities = 56/82 (68%), Positives = 71/82 (86%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
M SLKLQKRLA+SV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 191 ARVRKNTEARRKGRHCGFGKRK 256
+R R+ EA++KGRH G+GKR+
Sbjct: 61 SRARRAHEAKQKGRHSGYGKRR 82
Score = 102 bits (244), Expect = 3e-22
Identities = 54/110 (49%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = +1
Query: 208 HRGT*KGSSLWLW*EKGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMK 387
H KG +GT AR+P K LW AKKID+H+YH +YMK
Sbjct: 67 HEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMK 126
Query: 388 AKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARR--NKVRRHASAAR 531
KGN+FKNKRVLME IH+ KAEKAR K LSDQ EA+R +K R AR
Sbjct: 127 VKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKIAR 176
>07_03_1639 + 28305801-28305958,28306240-28306249
Length = 55
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1
Query: 382 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNK 504
MK KGN+ NKR + +AEKAR + LSDQ EA+ K
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQFEAKLAK 41
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 26 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 196
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 748 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 805
Query: 197 VRKNTEARRKGRHCGFG 247
+ T RKGR GFG
Sbjct: 806 DEETTSISRKGRAQGFG 822
>02_04_0038 -
19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 26 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 196
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 699 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 756
Query: 197 VRKNTEARRKGRHCGFG 247
+ T RKGR GFG
Sbjct: 757 DEETTSISRKGRAQGFG 773
>07_03_0435 +
18182657-18183509,18184477-18184574,18184663-18184833,
18185524-18185624,18185702-18185837,18186007-18186057,
18186202-18186489,18186610-18186844,18186924-18187204,
18187336-18187557
Length = 811
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 439 RKKAEKARTKMLSDQAEARRNKVRRHASA 525
RKKAE+A K +++AEARR K A
Sbjct: 208 RKKAEEAEAKRKAEEAEARRKKEEEERDA 236
>04_04_1687 - 35365766-35366356,35367137-35368135
Length = 529
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 160 HQETCSSPLPRPCPQKHR 213
H E C +PLP P P HR
Sbjct: 53 HAEQCPAPLPDPLPSAHR 70
>03_02_0050 + 5272471-5274861
Length = 796
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -1
Query: 549 SWRQYVPRGACVPPYFIAAGLSLVAKHLRPGLLSLLPVDVL-HEHTLVLEHI 397
++R+++ +C+P + L +HL P LLS +P+D L H H +L H+
Sbjct: 82 AYRRHLSPPSCLPSLVPLLPV-LPYRHLLPLLLSFVPLDPLRHLHRHLLAHL 132
>04_03_0266 + 13648287-13649099,13649186-13649524
Length = 383
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 65 KKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 211
K+K+ L +E ++ T R+ RK+ K + KK + H ++RK++
Sbjct: 320 KRKLVLSDDEGDDAEKTRDRETTRKLPKQA-IPKKKTSSHPMPKIRKSS 367
>10_06_0028 -
9802362-9802475,9802919-9803090,9803167-9803208,
9803344-9804011,9804098-9804418,9804495-9804833,
9804856-9805109,9805300-9805510
Length = 706
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 80 LDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVH 184
LDP +NE N R NI IKD L ++ +H
Sbjct: 628 LDPAVVNETTLKNDRANIVDYIKDCLFARQRQGLH 662
>07_03_0441 + 18256103-18258076
Length = 657
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Frame = -3
Query: 256 LSLTKATVTTLSTCLCVFADTGAGVDCYRFLDDETILDH---LTDVLSGVGVCDLID 95
L L T + CLC F V C+R ++ I + T ++ G G ++D
Sbjct: 396 LKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVD 452
>04_03_0227 +
12979635-12980363,12980439-12980474,12980604-12980873,
12980962-12981099,12981347-12981795,12981885-12982055,
12982136-12982370
Length = 675
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/56 (33%), Positives = 23/56 (41%)
Frame = +2
Query: 2 RVRMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 169
RVR L K V R LDP +NE N R N+ IKD L ++
Sbjct: 531 RVRAIDTNLLKLTWKHVHRKAPHVALLDPAVVNETTLKNDRANMMGYIKDCLFARQ 586
>02_02_0421 -
10042184-10042197,10042442-10042822,10044158-10044261,
10044634-10044734,10044806-10045147,10045981-10046158,
10047696-10047776,10049190-10049449
Length = 486
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
+ SL L R+ C +V+ D + N +NIRK + ++++ P+A +
Sbjct: 103 IESLSLMIRMLL-YCECFAARVYCDGCHCSPCGNKIENENIRKEAIETILLRNPLAFQPK 161
Query: 191 ARVRKNTEARRK 226
NT RK
Sbjct: 162 IENSPNTVTVRK 173
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,899,201
Number of Sequences: 37544
Number of extensions: 393424
Number of successful extensions: 1167
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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