Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0684
(632 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0934 - 12513810-12513834,12513918-12513970,12514212-125145... 131 5e-31
03_05_0125 - 21039767-21039791,21039876-21039922,21040220-210405... 130 1e-30
07_03_1639 + 28305801-28305958,28306240-28306249 37 0.012
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 33 0.14
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 33 0.14
01_01_0135 + 1231687-1232188,1234489-1234564,1234646-1234743,123... 31 0.76
07_03_0435 + 18182657-18183509,18184477-18184574,18184663-181848... 30 1.3
09_02_0146 + 4953007-4953297,4954105-4954341,4954592-4954669,495... 30 1.8
04_04_1687 - 35365766-35366356,35367137-35368135 29 4.1
03_02_0050 + 5272471-5274861 29 4.1
04_03_0266 + 13648287-13649099,13649186-13649524 28 5.4
10_06_0028 - 9802362-9802475,9802919-9803090,9803167-9803208,980... 28 7.1
07_03_0441 + 18256103-18258076 28 7.1
04_03_0227 + 12979635-12980363,12980439-12980474,12980604-129808... 28 7.1
02_02_0421 - 10042184-10042197,10042442-10042822,10044158-100442... 28 7.1
12_01_0476 + 3738526-3738567,3738695-3738739,3739240-3739601,373... 27 9.4
10_08_0781 + 20509033-20509714,20510048-20510191,20510604-205107... 27 9.4
09_02_0568 + 10748227-10748434,10749004-10749398 27 9.4
02_05_0067 + 25557975-25558553 27 9.4
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 27 9.4
01_06_0592 + 30465956-30466210,30466401-30466529,30466631-304667... 27 9.4
>03_02_0934 -
12513810-12513834,12513918-12513970,12514212-12514525,
12514608-12514730,12515710-12515821
Length = 208
Score = 131 bits (316), Expect = 5e-31
Identities = 57/82 (69%), Positives = 71/82 (86%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
M SLKLQKRLAASV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 191 ARVRKNTEARRKGRHCGFGKRK 256
+R R+ EA++KGRH G+GKR+
Sbjct: 61 SRARRAHEAKQKGRHSGYGKRR 82
Score = 102 bits (244), Expect = 3e-22
Identities = 54/110 (49%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = +1
Query: 208 HRGT*KGSSLWLW*EKGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMK 387
H KG +GT AR+P K LW AKKID+H+YH +YMK
Sbjct: 67 HEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMK 126
Query: 388 AKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARR--NKVRRHASAAR 531
KGN+FKNKRVLME IH+ KAEKAR K LSDQ EA+R +K R AR
Sbjct: 127 VKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKIAR 176
>03_05_0125 -
21039767-21039791,21039876-21039922,21040220-21040533,
21040613-21040735,21041599-21041710
Length = 206
Score = 130 bits (313), Expect = 1e-30
Identities = 56/82 (68%), Positives = 71/82 (86%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
M SLKLQKRLA+SV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 191 ARVRKNTEARRKGRHCGFGKRK 256
+R R+ EA++KGRH G+GKR+
Sbjct: 61 SRARRAHEAKQKGRHSGYGKRR 82
Score = 102 bits (244), Expect = 3e-22
Identities = 54/110 (49%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = +1
Query: 208 HRGT*KGSSLWLW*EKGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMK 387
H KG +GT AR+P K LW AKKID+H+YH +YMK
Sbjct: 67 HEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMK 126
Query: 388 AKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARR--NKVRRHASAAR 531
KGN+FKNKRVLME IH+ KAEKAR K LSDQ EA+R +K R AR
Sbjct: 127 VKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKIAR 176
>07_03_1639 + 28305801-28305958,28306240-28306249
Length = 55
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1
Query: 382 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNK 504
MK KGN+ NKR + +AEKAR + LSDQ EA+ K
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQFEAKLAK 41
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 26 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 196
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 748 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 805
Query: 197 VRKNTEARRKGRHCGFG 247
+ T RKGR GFG
Sbjct: 806 DEETTSISRKGRAQGFG 822
>02_04_0038 -
19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 26 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 196
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 699 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 756
Query: 197 VRKNTEARRKGRHCGFG 247
+ T RKGR GFG
Sbjct: 757 DEETTSISRKGRAQGFG 773
>01_01_0135 +
1231687-1232188,1234489-1234564,1234646-1234743,
1234841-1235355
Length = 396
Score = 31.1 bits (67), Expect = 0.76
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = -3
Query: 612 LLLSGKRGFVFSSERSAAVPPSWRQYVPRGACVPPYF 502
L LS GF SS A +PP YV RGA PP F
Sbjct: 21 LFLSALSGFSASSSLFARLPPP--SYVRRGAAAPPSF 55
>07_03_0435 +
18182657-18183509,18184477-18184574,18184663-18184833,
18185524-18185624,18185702-18185837,18186007-18186057,
18186202-18186489,18186610-18186844,18186924-18187204,
18187336-18187557
Length = 811
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 439 RKKAEKARTKMLSDQAEARRNKVRRHASA 525
RKKAE+A K +++AEARR K A
Sbjct: 208 RKKAEEAEAKRKAEEAEARRKKEEEERDA 236
>09_02_0146 +
4953007-4953297,4954105-4954341,4954592-4954669,
4954991-4955167,4955705-4955761,4955988-4956174,
4956910-4957055,4957213-4957395,4957860-4957970,
4959386-4959505,4959596-4959740,4960001-4960164,
4960816-4960902,4961062-4961390,4963426-4963507,
4963616-4963746,4963976-4964225,4965112-4965393,
4966780-4966986
Length = 1087
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 609 LLSGKRGFVFSSERSAAVPPSWRQYVPRGACVPPYFIAAG 490
L S KR FVF+ +AVP S P PP IA+G
Sbjct: 298 LSSQKRLFVFAKMLQSAVPQSLSWVAPVSGVKPPNLIASG 337
>04_04_1687 - 35365766-35366356,35367137-35368135
Length = 529
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 160 HQETCSSPLPRPCPQKHR 213
H E C +PLP P P HR
Sbjct: 53 HAEQCPAPLPDPLPSAHR 70
>03_02_0050 + 5272471-5274861
Length = 796
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -3
Query: 549 SWRQYVPRGACVPPYFIAAGLSLVAKHLRPGLLSLLPVDVL-HEHTLVLEHI 397
++R+++ +C+P + L +HL P LLS +P+D L H H +L H+
Sbjct: 82 AYRRHLSPPSCLPSLVPLLPV-LPYRHLLPLLLSFVPLDPLRHLHRHLLAHL 132
>04_03_0266 + 13648287-13649099,13649186-13649524
Length = 383
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 65 KKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 211
K+K+ L +E ++ T R+ RK+ K + KK + H ++RK++
Sbjct: 320 KRKLVLSDDEGDDAEKTRDRETTRKLPKQA-IPKKKTSSHPMPKIRKSS 367
>10_06_0028 -
9802362-9802475,9802919-9803090,9803167-9803208,
9803344-9804011,9804098-9804418,9804495-9804833,
9804856-9805109,9805300-9805510
Length = 706
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 80 LDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVH 184
LDP +NE N R NI IKD L ++ +H
Sbjct: 628 LDPAVVNETTLKNDRANIVDYIKDCLFARQRQGLH 662
>07_03_0441 + 18256103-18258076
Length = 657
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Frame = -2
Query: 256 LSLTKATVTTLSTCLCVFADTGAGVDCYRFLDDETILDH---LTDVLSGVGVCDLID 95
L L T + CLC F V C+R ++ I + T ++ G G ++D
Sbjct: 396 LKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVD 452
>04_03_0227 +
12979635-12980363,12980439-12980474,12980604-12980873,
12980962-12981099,12981347-12981795,12981885-12982055,
12982136-12982370
Length = 675
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/56 (33%), Positives = 23/56 (41%)
Frame = +2
Query: 2 RVRMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 169
RVR L K V R LDP +NE N R N+ IKD L ++
Sbjct: 531 RVRAIDTNLLKLTWKHVHRKAPHVALLDPAVVNETTLKNDRANMMGYIKDCLFARQ 586
>02_02_0421 -
10042184-10042197,10042442-10042822,10044158-10044261,
10044634-10044734,10044806-10045147,10045981-10046158,
10047696-10047776,10049190-10049449
Length = 486
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
+ SL L R+ C +V+ D + N +NIRK + ++++ P+A +
Sbjct: 103 IESLSLMIRMLL-YCECFAARVYCDGCHCSPCGNKIENENIRKEAIETILLRNPLAFQPK 161
Query: 191 ARVRKNTEARRK 226
NT RK
Sbjct: 162 IENSPNTVTVRK 173
>12_01_0476 +
3738526-3738567,3738695-3738739,3739240-3739601,
3739691-3740057,3740490-3740555,3741630-3741743
Length = 331
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 35 RLAASVMRCGKKKVWLDPNEINEIA--NTNSRQNIRKMIKDGLV 160
R A RC + LDPNEI ++ SR+ + +++ G++
Sbjct: 236 RFALHCRRCERDATPLDPNEIKHVSPYGITSREQVLEVVARGIL 279
>10_08_0781 +
20509033-20509714,20510048-20510191,20510604-20510719,
20511356-20511520,20511822-20512043,20512613-20512735
Length = 483
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 77 WLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGK 250
++D N+ + + +SR ++ ++ GL +K PV + VR E GR G G+
Sbjct: 29 YVDGNDTEDCYSGSSRASLAGALRQGLNLKSPVLGYKTPNVR---ELYTLGRELGQGQ 83
>09_02_0568 + 10748227-10748434,10749004-10749398
Length = 200
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 518 QAPRGTYCRQEGGTAADLSLEKTKPRLPLRSKH 616
+AP G R G AA L+L++ PRL +R+ +
Sbjct: 20 KAPFGAALRSAGKPAAALALQRKSPRLLVRANN 52
>02_05_0067 + 25557975-25558553
Length = 192
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 418 HACS*THYPSPSCRVSGIDACQSSW 344
H C H P CR + +DA Q+ W
Sbjct: 148 HGCDKEHAYQPPCRPNVVDASQAVW 172
>02_03_0300 +
17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 65 KKKVWLDPN-EINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRK 226
K KVW P E+ + +R + +K + +KP A R RVRK TEA K
Sbjct: 681 KPKVWSRPRKEVEPVGKPKARGHPKKQAEPD---EKPKA---RGRVRKTTEANGK 729
>01_06_0592 +
30465956-30466210,30466401-30466529,30466631-30466760,
30466861-30466981,30467111-30467192,30467334-30467384,
30467836-30467929,30468046-30468173
Length = 329
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 576 SERSAAVPPSWRQYVPRGACVPPYF 502
++R+AA WR+Y +GA PP F
Sbjct: 295 AKRAAAAARRWREYSRKGADKPPTF 319
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,878,469
Number of Sequences: 37544
Number of extensions: 400794
Number of successful extensions: 1258
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -