Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0682
(615 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 33 1.1
BC007203-1|AAH07203.1| 390|Homo sapiens Ras association (RalGDS... 29 9.9
BC004270-1|AAH04270.1| 390|Homo sapiens Ras association (RalGDS... 29 9.9
AY210419-1|AAO34702.1| 3501|Homo sapiens CUB and sushi multiple ... 29 9.9
AY062003-1|AAL40389.1| 336|Homo sapiens putative tumor suppress... 29 9.9
AY062002-1|AAL40388.1| 418|Homo sapiens putative tumor suppress... 29 9.9
AL591846-6|CAI13538.1| 392|Homo sapiens Ras association (RalGDS... 29 9.9
AL591846-5|CAI13537.1| 418|Homo sapiens Ras association (RalGDS... 29 9.9
AL591846-4|CAI13536.1| 336|Homo sapiens Ras association (RalGDS... 29 9.9
AL354681-5|CAI15254.1| 392|Homo sapiens Ras association (RalGDS... 29 9.9
AL354681-4|CAI15253.1| 418|Homo sapiens Ras association (RalGDS... 29 9.9
AL354681-3|CAI15252.1| 336|Homo sapiens Ras association (RalGDS... 29 9.9
AB209145-1|BAD92382.1| 352|Homo sapiens Ras association (RalGDS... 29 9.9
AB114605-1|BAC82444.1| 3667|Homo sapiens CSMD3 protein isoform 2... 29 9.9
AB114604-1|BAC82443.1| 3707|Homo sapiens CSMD3 protein isoform 1... 29 9.9
AB067481-1|BAB67787.2| 2977|Homo sapiens KIAA1894 protein protein. 29 9.9
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -2
Query: 494 KSPVSLFFVTT---SRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVA 336
++P + ++TT SG F+ + PS+ + + SPES P SPLPVT ++ +
Sbjct: 5614 RTPGDVSWMTTPPVEETSSG-FSLMSPSMTSPSPVSSTSPESIPSSPLPVTALLTS 5668
>BC007203-1|AAH07203.1| 390|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 protein.
Length = 390
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 560 TCPPNCSSLKYLKCT--HSVTRPRKSPVSLFFVTTSR 456
TC P C SL L C+ ++R R SP S VT S+
Sbjct: 155 TCHPECRSLIQLDCSQQEGLSRDRPSPESTLTVTFSQ 191
>BC004270-1|AAH04270.1| 390|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 protein.
Length = 390
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 560 TCPPNCSSLKYLKCT--HSVTRPRKSPVSLFFVTTSR 456
TC P C SL L C+ ++R R SP S VT S+
Sbjct: 155 TCHPECRSLIQLDCSQQEGLSRDRPSPESTLTVTFSQ 191
>AY210419-1|AAO34702.1| 3501|Homo sapiens CUB and sushi multiple
domains 3 protein.
Length = 3501
Score = 29.5 bits (63), Expect = 9.9
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -1
Query: 453 REWVICAPAAFLGCGSRFSGSLSG--IEP*FPVTRDNH 346
R W P+ CG RF G SG + P +P DN+
Sbjct: 1260 RAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNN 1297
>AY062003-1|AAL40389.1| 336|Homo sapiens putative tumor suppressor
RASSF3 isoform B protein.
Length = 336
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 560 TCPPNCSSLKYLKCT--HSVTRPRKSPVSLFFVTTSR 456
TC P C SL L C+ ++R R SP S VT S+
Sbjct: 157 TCHPECRSLIQLDCSQQEGLSRDRPSPESTLTVTFSQ 193
>AY062002-1|AAL40388.1| 418|Homo sapiens putative tumor suppressor
RASSF3 isoform A protein.
Length = 418
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 560 TCPPNCSSLKYLKCT--HSVTRPRKSPVSLFFVTTSR 456
TC P C SL L C+ ++R R SP S VT S+
Sbjct: 157 TCHPECRSLIQLDCSQQEGLSRDRPSPESTLTVTFSQ 193
>AL591846-6|CAI13538.1| 392|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 protein.
Length = 392
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 560 TCPPNCSSLKYLKCT--HSVTRPRKSPVSLFFVTTSR 456
TC P C SL L C+ ++R R SP S VT S+
Sbjct: 157 TCHPECRSLIQLDCSQQEGLSRDRPSPESTLTVTFSQ 193
>AL591846-5|CAI13537.1| 418|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 protein.
Length = 418
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 560 TCPPNCSSLKYLKCT--HSVTRPRKSPVSLFFVTTSR 456
TC P C SL L C+ ++R R SP S VT S+
Sbjct: 157 TCHPECRSLIQLDCSQQEGLSRDRPSPESTLTVTFSQ 193
>AL591846-4|CAI13536.1| 336|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 protein.
Length = 336
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 560 TCPPNCSSLKYLKCT--HSVTRPRKSPVSLFFVTTSR 456
TC P C SL L C+ ++R R SP S VT S+
Sbjct: 157 TCHPECRSLIQLDCSQQEGLSRDRPSPESTLTVTFSQ 193
>AL354681-5|CAI15254.1| 392|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 protein.
Length = 392
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 560 TCPPNCSSLKYLKCT--HSVTRPRKSPVSLFFVTTSR 456
TC P C SL L C+ ++R R SP S VT S+
Sbjct: 157 TCHPECRSLIQLDCSQQEGLSRDRPSPESTLTVTFSQ 193
>AL354681-4|CAI15253.1| 418|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 protein.
Length = 418
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 560 TCPPNCSSLKYLKCT--HSVTRPRKSPVSLFFVTTSR 456
TC P C SL L C+ ++R R SP S VT S+
Sbjct: 157 TCHPECRSLIQLDCSQQEGLSRDRPSPESTLTVTFSQ 193
>AL354681-3|CAI15252.1| 336|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 protein.
Length = 336
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 560 TCPPNCSSLKYLKCT--HSVTRPRKSPVSLFFVTTSR 456
TC P C SL L C+ ++R R SP S VT S+
Sbjct: 157 TCHPECRSLIQLDCSQQEGLSRDRPSPESTLTVTFSQ 193
>AB209145-1|BAD92382.1| 352|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 isoform B variant protein.
Length = 352
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 560 TCPPNCSSLKYLKCT--HSVTRPRKSPVSLFFVTTSR 456
TC P C SL L C+ ++R R SP S VT S+
Sbjct: 159 TCHPECRSLIQLDCSQQEGLSRDRPSPESTLTVTFSQ 195
>AB114605-1|BAC82444.1| 3667|Homo sapiens CSMD3 protein isoform 2
protein.
Length = 3667
Score = 29.5 bits (63), Expect = 9.9
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -1
Query: 453 REWVICAPAAFLGCGSRFSGSLSG--IEP*FPVTRDNH 346
R W P+ CG RF G SG + P +P DN+
Sbjct: 1361 RAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNN 1398
>AB114604-1|BAC82443.1| 3707|Homo sapiens CSMD3 protein isoform 1
protein.
Length = 3707
Score = 29.5 bits (63), Expect = 9.9
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -1
Query: 453 REWVICAPAAFLGCGSRFSGSLSG--IEP*FPVTRDNH 346
R W P+ CG RF G SG + P +P DN+
Sbjct: 1401 RAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNN 1438
>AB067481-1|BAB67787.2| 2977|Homo sapiens KIAA1894 protein protein.
Length = 2977
Score = 29.5 bits (63), Expect = 9.9
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -1
Query: 453 REWVICAPAAFLGCGSRFSGSLSG--IEP*FPVTRDNH 346
R W P+ CG RF G SG + P +P DN+
Sbjct: 741 RAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNN 778
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,605,136
Number of Sequences: 237096
Number of extensions: 1891861
Number of successful extensions: 5186
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5186
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -