Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0681
         (709 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z12017-3|CAA78049.1|  570|Caenorhabditis elegans Hypothetical pr...   116   2e-26
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr...    31   0.81 
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr...    31   0.81 
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z71180-7|CAK55177.1|  647|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z71180-6|CAI79160.1|  702|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z71180-5|CAD44114.1|  363|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z71180-4|CAA94893.2|  723|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U39745-4|AAA80446.1|  325|Caenorhabditis elegans Collagen protei...    28   7.5  
AL021475-8|CAK55192.1|  647|Caenorhabditis elegans Hypothetical ...    28   7.5  
AL021475-7|CAI79248.1|  702|Caenorhabditis elegans Hypothetical ...    28   7.5  
AL021475-6|CAD44157.1|  363|Caenorhabditis elegans Hypothetical ...    28   7.5  
AL021475-5|CAA16314.2|  723|Caenorhabditis elegans Hypothetical ...    28   7.5  
AF178536-1|AAD56365.1|  723|Caenorhabditis elegans EGL-9 protein.      28   7.5  
Z66519-8|CAA91379.1|  182|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U97005-13|AAB52290.1|  868|Caenorhabditis elegans Hypothetical p...    27   9.9  
U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical p...    27   9.9  

>Z12017-3|CAA78049.1|  570|Caenorhabditis elegans Hypothetical
           protein R08D7.3 protein.
          Length = 570

 Score =  116 bits (278), Expect = 2e-26
 Identities = 53/83 (63%), Positives = 62/83 (74%)
 Frame = +1

Query: 1   WRQKLDTQRGAVLANELRNNSCKLAKWTVQALLAGSDQIKFGYVSRAQVRDNSRHVILGT 180
           WR KLD Q+GAV+A E++NNS K+AKWT+QALLAGSD +K GYVSR   R    H IL T
Sbjct: 436 WRTKLDVQKGAVMATEIKNNSAKVAKWTLQALLAGSDTMKLGYVSRNNARSTQNHSILLT 495

Query: 181 QQFKPHEFAAQINLSMDNAWGIL 249
           Q  KP EFA+ I L+MDN WGIL
Sbjct: 496 QYVKPTEFASNIALNMDNCWGIL 518



 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +3

Query: 255 IIDICMKQKDGKYLIMKDPNKPLIRLYDIPDNTFESDASEESGDEQAD 398
           +ID CMKQK GKYL+MKDP  P+IRLY +P+ TFES+  E S +E +D
Sbjct: 521 VIDSCMKQKPGKYLLMKDPQSPVIRLYSLPEGTFESE-RESSDEENSD 567


>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
 Frame = +3

Query: 294  LIMKDPNKPLIRLYDIPDNTFESDASEESGDEQADTPFAPLYSYGNSKRV*NSTLS--IQ 467
            L   +P   L  LY+ P  T E D   +  D+  D P + L    N KR  +  +     
Sbjct: 1573 LYQVEPQIRLFALYNNPLPTMEDDVFRDEEDQIIDKPTSALQKLLNKKRGASGAMDHIRS 1632

Query: 468  RARELTVT-IEYAISKGHISENVKS 539
            RAR +  T I  A  +G   ENV++
Sbjct: 1633 RARYMEETNIPPAPERGMFYENVEA 1657


>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
 Frame = +3

Query: 294  LIMKDPNKPLIRLYDIPDNTFESDASEESGDEQADTPFAPLYSYGNSKRV*NSTLS--IQ 467
            L   +P   L  LY+ P  T E D   +  D+  D P + L    N KR  +  +     
Sbjct: 1573 LYQVEPQIRLFALYNNPLPTMEDDVFRDEEDQIIDKPTSALQKLLNKKRGASGAMDHIRS 1632

Query: 468  RARELTVT-IEYAISKGHISENVKS 539
            RAR +  T I  A  +G   ENV++
Sbjct: 1633 RARYMEETNIPPAPERGMFYENVEA 1657


>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
           protein F36F2.3a protein.
          Length = 1128

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 342 PDNTFESDASEESGDEQADT 401
           PD T E DA EE  DE+ DT
Sbjct: 675 PDETHEEDADEEPVDEEMDT 694


>Z71180-7|CAK55177.1|  647|Caenorhabditis elegans Hypothetical
           protein F22E12.4e protein.
          Length = 647

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 122 NLIWSEPASNACTVHLASLQELFRSSLA 39
           N I SE  S+ CT H ASL+ +  +SLA
Sbjct: 109 NSISSESMSSMCTSHEASLEHMSSASLA 136


>Z71180-6|CAI79160.1|  702|Caenorhabditis elegans Hypothetical
           protein F22E12.4d protein.
          Length = 702

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 122 NLIWSEPASNACTVHLASLQELFRSSLA 39
           N I SE  S+ CT H ASL+ +  +SLA
Sbjct: 185 NSISSESMSSMCTSHEASLEHMSSASLA 212


>Z71180-5|CAD44114.1|  363|Caenorhabditis elegans Hypothetical
           protein F22E12.4b protein.
          Length = 363

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 122 NLIWSEPASNACTVHLASLQELFRSSLA 39
           N I SE  S+ CT H ASL+ +  +SLA
Sbjct: 185 NSISSESMSSMCTSHEASLEHMSSASLA 212


>Z71180-4|CAA94893.2|  723|Caenorhabditis elegans Hypothetical
           protein F22E12.4a protein.
          Length = 723

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 122 NLIWSEPASNACTVHLASLQELFRSSLA 39
           N I SE  S+ CT H ASL+ +  +SLA
Sbjct: 185 NSISSESMSSMCTSHEASLEHMSSASLA 212


>U39745-4|AAA80446.1|  325|Caenorhabditis elegans Collagen protein
           173 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +2

Query: 32  PCSPTSCGTTPASSPSGPCRHYXRART 112
           P  P   G   A  P+GPC H    RT
Sbjct: 295 PGEPGKSGAAGARGPAGPCNHCPNPRT 321


>AL021475-8|CAK55192.1|  647|Caenorhabditis elegans Hypothetical
           protein F22E12.4e protein.
          Length = 647

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 122 NLIWSEPASNACTVHLASLQELFRSSLA 39
           N I SE  S+ CT H ASL+ +  +SLA
Sbjct: 109 NSISSESMSSMCTSHEASLEHMSSASLA 136


>AL021475-7|CAI79248.1|  702|Caenorhabditis elegans Hypothetical
           protein F22E12.4d protein.
          Length = 702

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 122 NLIWSEPASNACTVHLASLQELFRSSLA 39
           N I SE  S+ CT H ASL+ +  +SLA
Sbjct: 185 NSISSESMSSMCTSHEASLEHMSSASLA 212


>AL021475-6|CAD44157.1|  363|Caenorhabditis elegans Hypothetical
           protein F22E12.4b protein.
          Length = 363

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 122 NLIWSEPASNACTVHLASLQELFRSSLA 39
           N I SE  S+ CT H ASL+ +  +SLA
Sbjct: 185 NSISSESMSSMCTSHEASLEHMSSASLA 212


>AL021475-5|CAA16314.2|  723|Caenorhabditis elegans Hypothetical
           protein F22E12.4a protein.
          Length = 723

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 122 NLIWSEPASNACTVHLASLQELFRSSLA 39
           N I SE  S+ CT H ASL+ +  +SLA
Sbjct: 185 NSISSESMSSMCTSHEASLEHMSSASLA 212


>AF178536-1|AAD56365.1|  723|Caenorhabditis elegans EGL-9 protein.
          Length = 723

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 122 NLIWSEPASNACTVHLASLQELFRSSLA 39
           N I SE  S+ CT H ASL+ +  +SLA
Sbjct: 185 NSISSESMSSMCTSHEASLEHMSSASLA 212


>Z66519-8|CAA91379.1|  182|Caenorhabditis elegans Hypothetical
           protein B0334.10 protein.
          Length = 182

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +1

Query: 148 RDNSRHVILGTQQFKPHEFAAQINLSMDNA 237
           R N RH I G    KPH     +N   DNA
Sbjct: 84  RKNIRHWIEGHVSDKPHHLVQSLNFVADNA 113


>U97005-13|AAB52290.1|  868|Caenorhabditis elegans Hypothetical
           protein F19F10.11b protein.
          Length = 868

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 486 VTIEYAISKGHISENVKSSGVKKTTDHF 569
           V  ++ IS+G   EN+K S  KK  +HF
Sbjct: 232 VLSQFMISQGIPFENIKDSSFKKLLEHF 259


>U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical
           protein F19F10.11a protein.
          Length = 1121

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 486 VTIEYAISKGHISENVKSSGVKKTTDHF 569
           V  ++ IS+G   EN+K S  KK  +HF
Sbjct: 232 VLSQFMISQGIPFENIKDSSFKKLLEHF 259


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,581,082
Number of Sequences: 27780
Number of extensions: 222673
Number of successful extensions: 873
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)