Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0680
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 137 5e-33
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 137 5e-33
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 137 5e-33
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 109 1e-24
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 109 1e-24
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 91 5e-19
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 91 5e-19
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 82 3e-16
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 58 4e-09
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 58 4e-09
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 58 4e-09
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 58 5e-09
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 58 5e-09
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.005
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.067
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.20
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.20
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 32 0.27
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.82
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.82
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.82
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.4
AC024791-38|AAY55888.1| 246|Caenorhabditis elegans Hypothetical... 29 2.5
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 3.3
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 29 3.3
AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical... 29 3.3
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 5.8
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 28 5.8
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 28 5.8
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 27 7.7
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 27 7.7
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 137 bits (332), Expect = 5e-33
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 491 NGQTRE 508
NGQTRE
Sbjct: 130 NGQTRE 135
Score = 109 bits (263), Expect = 1e-24
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +3
Query: 252 GKGSFKYAWVLDKLKAERD 308
GKGSFKYAWVLDKLKAER+
Sbjct: 50 GKGSFKYAWVLDKLKAERE 68
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 137 bits (332), Expect = 5e-33
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 491 NGQTRE 508
NGQTRE
Sbjct: 130 NGQTRE 135
Score = 109 bits (263), Expect = 1e-24
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 511 ALLAFTLGVKQLIVGVNQMDXTEPPYSE 594
ALLA TLGVKQLIV N+MD TEPP+SE
Sbjct: 137 ALLAQTLGVKQLIVACNKMDSTEPPFSE 164
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +3
Query: 252 GKGSFKYAWVLDKLKAERD 308
GKGSFKYAWVLDKLKAER+
Sbjct: 50 GKGSFKYAWVLDKLKAERE 68
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 137 bits (332), Expect = 5e-33
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 491 NGQTRE 508
NGQTRE
Sbjct: 130 NGQTRE 135
Score = 109 bits (263), Expect = 1e-24
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 511 ALLAFTLGVKQLIVGVNQMDXTEPPYSE 594
ALLA TLGVKQLIV N+MD TEPP+SE
Sbjct: 137 ALLAQTLGVKQLIVACNKMDSTEPPFSE 164
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +3
Query: 252 GKGSFKYAWVLDKLKAERD 308
GKGSFKYAWVLDKLKAER+
Sbjct: 50 GKGSFKYAWVLDKLKAERE 68
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 109 bits (263), Expect = 1e-24
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 37.5 bits (83), Expect = 0.007
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 252 GKGSFKYAWVLDKLKAER 305
GKGSFKYAWVLDKLK +
Sbjct: 50 GKGSFKYAWVLDKLKVTK 67
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 109 bits (263), Expect = 1e-24
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 102 bits (244), Expect = 2e-22
Identities = 45/48 (93%), Positives = 48/48 (100%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 454
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +3
Query: 252 GKGSFKYAWVLDKLKAERD 308
GKGSFKYAWVLDKLKAER+
Sbjct: 50 GKGSFKYAWVLDKLKAERE 68
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 544 LIVGVNQMDXTEPPYSE 594
L+V N+MD TEPP+SE
Sbjct: 114 LVVACNKMDSTEPPFSE 130
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 91.1 bits (216), Expect = 5e-19
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 233 GVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFEN 292
Query: 491 NGQTRE 508
GQT+E
Sbjct: 293 GGQTKE 298
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +1
Query: 115 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGK 214
Score = 33.9 bits (74), Expect = 0.088
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 249 NGKGSFKYAWVLDKLKAERD 308
NGK SF YAWVLD+ + ER+
Sbjct: 212 NGKASFAYAWVLDETEEERE 231
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 511 ALLAFTLGVKQLIVGVNQMDXTE 579
ALL +LGV QLIV VN++D +
Sbjct: 300 ALLLRSLGVTQLIVAVNKLDTVD 322
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 91.1 bits (216), Expect = 5e-19
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 251 GVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFEN 310
Query: 491 NGQTRE 508
GQT+E
Sbjct: 311 GGQTKE 316
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +1
Query: 115 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGK 232
Score = 33.9 bits (74), Expect = 0.088
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 249 NGKGSFKYAWVLDKLKAERD 308
NGK SF YAWVLD+ + ER+
Sbjct: 230 NGKASFAYAWVLDETEEERE 249
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 511 ALLAFTLGVKQLIVGVNQMDXTE 579
ALL +LGV QLIV VN++D +
Sbjct: 318 ALLLRSLGVTQLIVAVNKLDTVD 340
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 81.8 bits (193), Expect = 3e-16
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G +
Sbjct: 172 GKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDR 231
Query: 491 NGQTRE 508
GQTRE
Sbjct: 232 GGQTRE 237
Score = 68.5 bits (160), Expect = 3e-12
Identities = 28/51 (54%), Positives = 40/51 (78%)
Frame = +1
Query: 109 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKD 261
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G++
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRE 154
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 58.4 bits (135), Expect = 4e-09
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 97 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG 148
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 112 KEKTHINIVVIGHVDSGKSTTT 177
++K H+N+ IGHVD GK+T T
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLT 66
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 58.4 bits (135), Expect = 4e-09
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 98 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG 149
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 112 KEKTHINIVVIGHVDSGKSTTT 177
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 58.4 bits (135), Expect = 4e-09
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 98 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG 149
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 112 KEKTHINIVVIGHVDSGKSTTT 177
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 58.0 bits (134), Expect = 5e-09
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 475
GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME 147
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 118 KTHINIVVIGHVDSGKSTTT 177
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 58.0 bits (134), Expect = 5e-09
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 475
GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME 147
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 118 KTHINIVVIGHVDSGKSTTT 177
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 311 GITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
GIT I + E +K VT +D PGH F G AD VL+VAA G
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDG 240
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.067
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGI 207
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
GIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 75 GITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
GIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 87 GITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 246
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.15
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGID 210
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
GITI A + + IID PGH DF + D AVL++ G G
Sbjct: 97 GITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.20
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 201
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 317 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.20
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 201
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 317 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKDPSNMLGYWTN 291
+I+ GH+D S GH +K GI E FE E ++ + P+ GY T+
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATS 1685
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 320 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 189 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 320 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 64 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.82
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 359 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 454
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 368 IIDAPGHRDFIKNMITGTSQADCAVLIV 451
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AC024791-38|AAY55888.1| 246|Caenorhabditis elegans Hypothetical
protein Y47G6A.32 protein.
Length = 246
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -2
Query: 445 EHS-AISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCDTXSRSAFSLSNTQAY 269
EH ++++ CD V E S +D N +L S E PE + + S+ LS
Sbjct: 104 EHGDSVAVNPHCDGVTFEGITSTDFDDSNCLLVSCE-PECQFNGPSTQHSSGVLSVLIHR 162
Query: 268 LKDPFPFPGPPSRTSRWYV 212
+++ P PS T Y+
Sbjct: 163 IRNETTTPPTPSTTKSSYI 181
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 127 INIVVIGHVDSGKSTTT 177
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 362 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
+ +ID PGH I+ ++ ++ D A++I+ G
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG 108
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 127 INIVVIGHVDSGKSTTT 177
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 100 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGKD 261
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 100 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGKD 261
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 100 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGKD 261
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical
protein Y110A7A.8 protein.
Length = 504
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 166 STTTGHLIYKCGGIDKRTIEKFEKEAQEMGKDPSNMLGYWT 288
STTT HL+ + GG+ Q +GK N++G+ T
Sbjct: 234 STTTAHLVSQAGGLSPLATMP-SCNVQVLGKTKKNLIGFST 273
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 362 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 457
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 100 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 192
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 100 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 192
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 362 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 451
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 362 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 451
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 120 LFLAHFWLVELWVY*FHFFTSQNNIFLTLTTDYKLRV 10
+F F ++ + V HF SQ+N+ L LT D + +
Sbjct: 13 IFYVLFLIIPIKVTSIHFVDSQHNVILILTDDQDIEL 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,451,556
Number of Sequences: 27780
Number of extensions: 262214
Number of successful extensions: 863
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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