Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0680
(596 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 141 5e-36
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 141 5e-36
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 137 7e-35
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 133 1e-33
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.002
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.98
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.3
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.0
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 9.2
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.2
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 9.2
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 9.2
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 141 bits (341), Expect = 5e-36
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK
Sbjct: 13 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 72
Query: 491 NGQTRE 508
NGQTRE
Sbjct: 73 NGQTRE 78
Score = 56.4 bits (130), Expect = 2e-10
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 511 ALLAFTLGVKQLIVGVNQMDXTEPPYSE 594
ALLAFTLGVKQLIVGVN+MD TEPPYSE
Sbjct: 80 ALLAFTLGVKQLIVGVNKMDSTEPPYSE 107
Score = 26.2 bits (55), Expect = 0.24
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3
Query: 276 WVLDKLKAERD 308
WVLDKLKAER+
Sbjct: 1 WVLDKLKAERE 11
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 141 bits (341), Expect = 5e-36
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK
Sbjct: 70 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 129
Query: 491 NGQTRE 508
NGQTRE
Sbjct: 130 NGQTRE 135
Score = 109 bits (262), Expect = 2e-26
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 56.4 bits (130), Expect = 2e-10
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 511 ALLAFTLGVKQLIVGVNQMDXTEPPYSE 594
ALLAFTLGVKQLIVGVN+MD TEPPYSE
Sbjct: 137 ALLAFTLGVKQLIVGVNKMDSTEPPYSE 164
Score = 43.6 bits (98), Expect = 2e-06
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +3
Query: 252 GKGSFKYAWVLDKLKAERD 308
GKGSFKYAWVLDKLKAER+
Sbjct: 50 GKGSFKYAWVLDKLKAERE 68
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 137 bits (332), Expect = 7e-35
Identities = 64/66 (96%), Positives = 65/66 (98%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
GITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISK 129
Query: 491 NGQTRE 508
NGQTRE
Sbjct: 130 NGQTRE 135
Score = 109 bits (262), Expect = 2e-26
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 55.2 bits (127), Expect = 5e-10
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +1
Query: 511 ALLAFTLGVKQLIVGVNQMDXTEPPYSE 594
ALLAFTLGVKQLIVGVN+MD T+PPYSE
Sbjct: 137 ALLAFTLGVKQLIVGVNKMDMTDPPYSE 164
Score = 43.6 bits (98), Expect = 2e-06
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +3
Query: 252 GKGSFKYAWVLDKLKAERD 308
GKGSFKYAWVLDKLKAER+
Sbjct: 50 GKGSFKYAWVLDKLKAERE 68
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 133 bits (322), Expect = 1e-33
Identities = 62/62 (100%), Positives = 62/62 (100%)
Frame = +2
Query: 323 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 502
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 503 RE 508
RE
Sbjct: 61 RE 62
Score = 56.4 bits (130), Expect = 2e-10
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 511 ALLAFTLGVKQLIVGVNQMDXTEPPYSE 594
ALLAFTLGVKQLIVGVN+MD TEPPYSE
Sbjct: 64 ALLAFTLGVKQLIVGVNKMDSTEPPYSE 91
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.002
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 362 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.43
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 118 KTHINIVVIGHVDSGKST 171
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.98
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 127 INIVVIGHVDSGKST 171
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 347 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 448
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 347 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 448
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 208 DKRTIEKFEKEAQEMG 255
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 9.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 508 LTGLTVLRDTSFEFTGTGSYDEHSAISLR 422
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 208 DKRTIEKFEKEAQEMG 255
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 208 DKRTIEKFEKEAQEMG 255
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,855
Number of Sequences: 438
Number of extensions: 3179
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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