Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0679
         (658 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   167   1e-43
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    29   0.030
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.5  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   3.4  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   4.5  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   4.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   4.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.5  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    22   5.9  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  167 bits (405), Expect = 1e-43
 Identities = 88/196 (44%), Positives = 121/196 (61%), Gaps = 3/196 (1%)
 Frame = +2

Query: 65  IFYPLLGLTTAIWILYRWQQNSHMHKLAELLPGPAPIPIFGNALTXHEEKSPRISQPRSG 244
           +F  LL     ++ +Y      H+ +LAE +PGP  +P+ GNAL          SQ    
Sbjct: 14  VFLSLLIPALILYFIYFRISRRHLLELAEKIPGPPALPLIGNALDLFGSPDAMFSQVLKK 73

Query: 245 LCATFGNVVRVWLGSKLIVFLADADDIEIILNSHVHIDKATEYKFFKPWLGEGLLISSGP 424
               F +VV++W+G KL++ L D  D+EIIL+S+V+IDK+TEY+FFKPWLG+GLLIS+G 
Sbjct: 74  -AENFKDVVKIWVGPKLVICLIDPRDVEIILSSNVYIDKSTEYRFFKPWLGDGLLISTGQ 132

Query: 425 KWRSHXXMIAPTFHINILKSFVGIFNQN---VTTW*RS*NLKSEKHLTYMIT*VVPQLIF 595
           KWR+H  +IAPTFH+N+LKSF+ +FN N   V    R  N K      YM    V     
Sbjct: 133 KWRNHRKLIAPTFHLNVLKSFIDLFNANARSVVEKMRKENGKEFDCHNYMSELTVD---I 189

Query: 596 LLETAMGISRKTQDES 643
           LLETAMG+S+ T+D +
Sbjct: 190 LLETAMGVSKPTRDHN 205


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 29.5 bits (63), Expect = 0.030
 Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 359 YQYG-HGC*GLFQYHQRQLEKRSTWSPTKRGRRCQMLRI 246
           + YG H C G   + +R ++++  + P  + ++C +LRI
Sbjct: 77  FHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRI 115


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 455 PTFHINILKSFVG 493
           PT+ +NILKS VG
Sbjct: 126 PTWEVNILKSIVG 138


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 86  LTTAIWILYRWQQNSHMHKLAE 151
           LTT +W+ + WQ +      AE
Sbjct: 67  LTTNVWLEHEWQDHKFQWDPAE 88


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 9  VK*RAWWMRPRD 44
          +K + WW RPR+
Sbjct: 40 IKRKRWWSRPRE 51


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 140 KLAELLPGPAPIPIFG 187
           K    +PGP  +PIFG
Sbjct: 48  KTVSKVPGPFSLPIFG 63


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +2

Query: 68  FYPLLGLTTAIWILYRWQQNSHMHKLAELLPGPAPIPIFG 187
           F  L G+      LY +  ++     +  + GP P+P FG
Sbjct: 5   FEILCGIAVLFLALYYYLTSTFDFWKSRGVVGPKPVPFFG 44


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 559 VHDYMSGTTVDIFIRNGNGNFQ 624
           + ++M   ++D F+R  +G FQ
Sbjct: 712 ITEFMENGSLDTFLRANDGKFQ 733


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 150 SASLCICEFCCHLYR 106
           S +L +CEFC   YR
Sbjct: 32  SDTLYVCEFCNRRYR 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,980
Number of Sequences: 438
Number of extensions: 4842
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)