BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0678
(650 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 27 0.10
DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9 prot... 26 0.31
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 25 0.71
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 24 1.2
AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory recept... 23 2.2
AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 21 6.7
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 21 6.7
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 21 8.8
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 21 8.8
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 21 8.8
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 21 8.8
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 21 8.8
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 21 8.8
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 27.5 bits (58), Expect = 0.10
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 139 ILLVDGGIVTTNVFCCSLKEKFKL*YFWCTTKLFSK 32
I+L+D G V V L FKL YFW F K
Sbjct: 85 IILIDLGEVAVTVLAGILTTPFKLPYFWKMLTGFGK 120
>DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9
protein.
Length = 383
Score = 25.8 bits (54), Expect = 0.31
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 404 DKDQSGFITST-ELRSALVNAQGQTFSETACNLMIGC 511
D+D+ F+T EL+SAL NA+G+T S + C
Sbjct: 152 DEDKVNFVTLLGELKSAL-NAKGKTLSAAVSGGIASC 187
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 24.6 bits (51), Expect = 0.71
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 401 VDKDQSGFITST-ELRSALVNAQGQTFSETACNLMIGC 511
VD+D+ F+T EL+SAL NA+G S + C
Sbjct: 152 VDEDKVNFVTLLGELKSAL-NAKGMILSAAVSGGIASC 188
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 23.8 bits (49), Expect = 1.2
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 401 VDKDQSGFITST-ELRSALVNAQGQTFSETACNLMIGC 511
VD+D+ F+T EL+SAL NA+G S + C
Sbjct: 152 VDEDKVNFVTLLGELKSAL-NAKGLILSAAVSGGIASC 188
>AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory receptor
candidate 60 protein.
Length = 364
Score = 23.0 bits (47), Expect = 2.2
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 488 ACNLMIGCSTKTAT 529
+ N+M GCST T+T
Sbjct: 341 SANIMSGCSTSTST 354
>AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical
protein protein.
Length = 205
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 154 SNLKTFHKNKYKFF 195
S LK +HK KY+ F
Sbjct: 24 SYLKIYHKEKYRKF 37
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 295 LRWNATRPIRNWTWTVPFHWSWGY 366
+R +RP R TVP + +W Y
Sbjct: 255 IRCLKSRPARQIALTVPRYQAWWY 278
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 390 HCCTWGVIVPPTPMEGYGPCP 328
+C +G I T +EG CP
Sbjct: 39 YCIIFGAIATLTCIEGLRDCP 59
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 390 HCCTWGVIVPPTPMEGYGPCP 328
+C +G I T +EG CP
Sbjct: 35 YCIIFGAIATLTCIEGLRDCP 55
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 310 TRPIRNWTWTVPFHWSWGY 366
+RP R TVP + +W Y
Sbjct: 260 SRPARQIALTVPRYQAWWY 278
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 310 TRPIRNWTWTVPFHWSWGY 366
+RP R TVP + +W Y
Sbjct: 260 SRPARQIALTVPRYQAWWY 278
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 310 TRPIRNWTWTVPFHWSWGY 366
+RP R TVP + +W Y
Sbjct: 260 SRPARQIALTVPRYQAWWY 278
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 310 TRPIRNWTWTVPFHWSWGY 366
+RP R TVP + +W Y
Sbjct: 260 SRPARQIALTVPRYQAWWY 278
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,350
Number of Sequences: 336
Number of extensions: 3722
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -