Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0676
         (691 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0155 + 13274537-13274741,13274827-13274864,13274909-132749...    33   0.28 
08_02_1111 + 24377268-24377444,24377543-24377630,24378072-243781...    31   0.65 
04_03_0937 + 20923705-20923833,20924001-20924012,20924413-209244...    28   8.0  

>01_03_0155 +
           13274537-13274741,13274827-13274864,13274909-13274968,
           13275117-13275176,13277072-13277146,13277233-13277346
          Length = 183

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 11/17 (64%), Positives = 16/17 (94%)
 Frame = +1

Query: 172 FQKEISNMMHGFGDNPN 222
           FQK++ +MM+GFGD+PN
Sbjct: 65  FQKDLQHMMYGFGDDPN 81


>08_02_1111 +
           24377268-24377444,24377543-24377630,24378072-24378157,
           24378358-24378511,24378723-24378883,24378964-24379632,
           24379860-24380058,24380188-24380405,24380578-24380755,
           24380859-24381358
          Length = 809

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 587 YLREVRASELTESCL*KYGAYHKLDGSSXPCHGYG 691
           ++  V   EL+ S L  YG + + DG S   HGYG
Sbjct: 363 WINSVTVGELSHSALGFYGGHWQPDGKSILAHGYG 397


>04_03_0937 +
           20923705-20923833,20924001-20924012,20924413-20924473,
           20924523-20924749,20924859-20925104,20925645-20925657,
           20927681-20928302,20928320-20928949,20928960-20929224
          Length = 734

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 413 NRQQITSKRHNISRNYIL*YYTRRREGSDNEQKRTHIDVIKLIDEADEVSQIKFD 577
           N+QQI  K   + R+Y L    R++ G+  + +R  I        AD+ S  K+D
Sbjct: 2   NKQQIQDKEKELKRDYRLLKEARKQSGASGDNQRCMI-------VADDASNEKYD 49


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,386,594
Number of Sequences: 37544
Number of extensions: 273990
Number of successful extensions: 666
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)