Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0676
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    25   2.3  
DQ974171-1|ABJ52811.1|  403|Anopheles gambiae serpin 14 protein.       24   3.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   3.9  
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    23   9.1  

>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 192 VRYFFLKVRPFSTCFHSIVSHFVSNSQEDFKITSNYYL 79
           +R+  L VR F  C H + +   SNSQ  FK    +++
Sbjct: 270 LRFGCLSVRMFYWCVHDLFAKVQSNSQ--FKYPGGHHI 305


>DQ974171-1|ABJ52811.1|  403|Anopheles gambiae serpin 14 protein.
          Length = 403

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +1

Query: 88  ITSNFKIFLRIGDKMTYYTMETCGEGTNFQKEISNMMHGF 207
           + +NF  F+ I  K+ +YT+   G    F+ +   +++GF
Sbjct: 83  LPANFTEFI-INQKLLHYTLSDAGGSEGFRMKNRIIVNGF 121


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 178 KEISNMMHGFGDNPNPNAATV 240
           K++S +MH    +PN N+ TV
Sbjct: 128 KKLSVLMHNSAKHPNTNSCTV 148


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
 Frame = +2

Query: 377 KTFARLPAKTGSNRQQITSKRHNISRNYIL*YYT---RRRE 490
           + F  +PA  G  RQ      +     Y+L Y +   RRRE
Sbjct: 225 RLFRNVPAAAGWQRQHAKQTEYQCRLTYVLEYVSAPKRRRE 265


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,752
Number of Sequences: 2352
Number of extensions: 12199
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)