Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0676
(691 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021493-7|CAA16389.3| 345|Caenorhabditis elegans Hypothetical ... 33 0.25
U58751-3|AAN84880.1| 667|Caenorhabditis elegans Pctaire class c... 30 1.8
U58751-2|AAL00852.1| 700|Caenorhabditis elegans Pctaire class c... 30 1.8
U58751-1|AAB00656.1| 577|Caenorhabditis elegans Pctaire class c... 30 1.8
AF129110-1|AAD37120.1| 577|Caenorhabditis elegans Pct-1 protein. 30 1.8
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine re... 28 7.2
Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z47808-9|CAI46561.1| 425|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr... 27 9.6
AC006708-5|AAF60428.2| 254|Caenorhabditis elegans Hypothetical ... 27 9.6
>AL021493-7|CAA16389.3| 345|Caenorhabditis elegans Hypothetical
protein Y51A2B.4 protein.
Length = 345
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 330 TNYDIIYTMRNNTVKLKRLHDYQQKLDQIDNKSQVNVTTSAETIYSNIILEDEKD 494
+N+D+I+T + L L ++ L I N SQV V T AE N+I D
Sbjct: 154 SNHDVIFTGHSLGGSLAALSAFETVLSGIRNSSQVKVVTLAEPRTGNLIFAKNFD 208
>U58751-3|AAN84880.1| 667|Caenorhabditis elegans Pctaire class cell
cycle kinaseprotein 1, isoform c protein.
Length = 667
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 306 NLRGSKTITNYDIIYTMRNNTVKLKRL-HDYQQKLDQIDNKSQVN 437
NLR + +T +DII+T R T+ + + D +Q +D +N Q+N
Sbjct: 380 NLRHANVVTLHDIIHTDRLLTLVFEYVDRDLKQYMDSCNNAMQMN 424
>U58751-2|AAL00852.1| 700|Caenorhabditis elegans Pctaire class cell
cycle kinaseprotein 1, isoform b protein.
Length = 700
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 306 NLRGSKTITNYDIIYTMRNNTVKLKRL-HDYQQKLDQIDNKSQVN 437
NLR + +T +DII+T R T+ + + D +Q +D +N Q+N
Sbjct: 413 NLRHANVVTLHDIIHTDRLLTLVFEYVDRDLKQYMDSCNNAMQMN 457
>U58751-1|AAB00656.1| 577|Caenorhabditis elegans Pctaire class cell
cycle kinaseprotein 1, isoform a protein.
Length = 577
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 306 NLRGSKTITNYDIIYTMRNNTVKLKRL-HDYQQKLDQIDNKSQVN 437
NLR + +T +DII+T R T+ + + D +Q +D +N Q+N
Sbjct: 290 NLRHANVVTLHDIIHTDRLLTLVFEYVDRDLKQYMDSCNNAMQMN 334
>AF129110-1|AAD37120.1| 577|Caenorhabditis elegans Pct-1 protein.
Length = 577
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 306 NLRGSKTITNYDIIYTMRNNTVKLKRL-HDYQQKLDQIDNKSQVN 437
NLR + +T +DII+T R T+ + + D +Q +D +N Q+N
Sbjct: 290 NLRHANVVTLHDIIHTDRLLTLVFEYVDRDLKQYMDSCNNAMQMN 334
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
protein T21C9.6 protein.
Length = 1215
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 163 GTNFQKEISNMMHGFGDNPNPNAATVL 243
G+NF++E+ N +G NP+ A V+
Sbjct: 502 GSNFRREVLNYRKNYGQQLNPSMAVVI 528
>AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine
receptor, class h protein23 protein.
Length = 321
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -2
Query: 297 IFLLVGYS*AVAKQFFY*KYRCSVRVRVISKSVHHVR---YFFLKVRPFSTCFHSIVSHF 127
I L++ Y+ + FY +Y+ S+ + + ++ YF + F T F + SH
Sbjct: 97 IALVMQYTATSVSEMFYFRYKASILNYKTYRFTYFIKFTVYFTRCISIFDTFFVILTSHD 156
Query: 126 VSNSQEDFKIT 94
QE+ K T
Sbjct: 157 AHRFQEEHKAT 167
>Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical
protein T06G6.8 protein.
Length = 417
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 309 LRGSKTITNY-DIIYTMRNNTVKLKRLHDY 395
LRG+ + N+ DII T +TVKLK + Y
Sbjct: 57 LRGASVVHNFKDIIITAPGSTVKLKAVGGY 86
>Z47808-9|CAI46561.1| 425|Caenorhabditis elegans Hypothetical
protein D2013.8b protein.
Length = 425
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 443 NISRNYIL*YYTRRREGSDNEQKRTHIDVIKLIDEADEVSQIKFDAIDYLREVRASELTE 622
+ISRN ++ YT+ G+ + R + +D + E +I +D D VR EL +
Sbjct: 151 SISRNKLIGLYTKSTIGASHVVCREDDVAVVRLDGSIEFLRIDYDRTDGTIRVRKIELLK 210
Query: 623 S 625
S
Sbjct: 211 S 211
>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
protein D2013.8a protein.
Length = 1087
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 443 NISRNYIL*YYTRRREGSDNEQKRTHIDVIKLIDEADEVSQIKFDAIDYLREVRASELTE 622
+ISRN ++ YT+ G+ + R + +D + E +I +D D VR EL +
Sbjct: 813 SISRNKLIGLYTKSTIGASHVVCREDDVAVVRLDGSIEFLRIDYDRTDGTIRVRKIELLK 872
Query: 623 S 625
S
Sbjct: 873 S 873
>AC006708-5|AAF60428.2| 254|Caenorhabditis elegans Hypothetical
protein Y110A7A.11 protein.
Length = 254
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +3
Query: 342 IIYTMRNNTVKLKRLHDYQQKLDQIDNKSQVNVTTSAE 455
+IYT++N+ LH+Y+Q++ Q+ ++ +SAE
Sbjct: 43 MIYTLQNDETTNDILHEYRQEVLQLKLLAEAESKSSAE 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,247,596
Number of Sequences: 27780
Number of extensions: 274886
Number of successful extensions: 818
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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