Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0675
         (675 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B479B Cluster: PREDICTED: similar to CG4562-PA;...    34   2.7  
UniRef50_Q84IL2 Cluster: Collagenase; n=1; Clostridium sordellii...    33   4.8  
UniRef50_Q24C98 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_A5K901 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  

>UniRef50_UPI00015B479B Cluster: PREDICTED: similar to CG4562-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           CG4562-PA - Nasonia vitripennis
          Length = 1304

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = -1

Query: 621 VFKNHYLWMGCVQ---INHVLLQEVNSVVLGFNLNYLERIPINKCH 493
           VF  HY+W+  +Q   I+++L +EVN    G  L  L  IP++ C+
Sbjct: 210 VFSLHYIWIAPIQTALISYLLYREVNLAAAGGILTLLLFIPVHGCY 255


>UniRef50_Q84IL2 Cluster: Collagenase; n=1; Clostridium sordellii|Rep:
            Collagenase - Clostridium sordellii
          Length = 1025

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 358  TKPNKYYLGSYNF-RQVANSLHYFLHIYLAMNLANQPTASFEQEKNMTFINWNPFQV 525
            TKP KYY+  YN  + +AN         L +N  N      EQE N +F   NPF +
Sbjct: 879  TKPGKYYILVYNHDKSIAN-------YNLKVNFGNNNDDGVEQEDNNSFEKANPFSI 928


>UniRef50_Q24C98 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 940

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = -1

Query: 411 VCYLSKIVAT*IVFVRFCHNNTFIFYHAINVNSIECIF*FAW-CHDIIIIYIRTVCMKSL 235
           V Y+ K     ++F+ FC    FIF      NS   +  F+W C   ++I         L
Sbjct: 440 VDYIEKYFEV-VMFMVFCGLVGFIFVAWPKFNSCAILLHFSWYCSTCVLIV-------GL 491

Query: 234 MLCLILFSAGIL*ING 187
            LCLI+FS G++  NG
Sbjct: 492 ALCLIMFSIGLILNNG 507


>UniRef50_A5K901 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 2451

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 164  KKIIMFAFPFIQSMPAENKIRHSINDFMQTV 256
            K +++F F  + S P  NK++HSI  ++Q +
Sbjct: 2284 KSVVIFLFRVLHSFPYSNKVKHSIRKYLQNL 2314


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,736,244
Number of Sequences: 1657284
Number of extensions: 10824564
Number of successful extensions: 23091
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23081
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)