Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0672
(620 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 140 5e-33
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 140 5e-33
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 140 5e-33
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 140 5e-33
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 140 5e-33
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 140 5e-33
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 140 5e-33
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 75 2e-13
BC107047-1|AAI07048.1| 224|Homo sapiens dickkopf homolog 4 (Xen... 32 1.9
BC107046-1|AAI07047.1| 224|Homo sapiens dickkopf homolog 4 (Xen... 32 1.9
AF177397-1|AAF02677.1| 224|Homo sapiens dickkopf-4 protein. 32 1.9
AB018005-1|BAA33475.1| 224|Homo sapiens hdkk-4 protein. 32 1.9
AB017788-1|BAA33438.1| 224|Homo sapiens hdkk-4 protein. 32 1.9
AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein. 30 5.7
AL163279-2|CAB90452.1| 2295|Homo sapiens homolog to cAMP respons... 30 7.6
AJ292466-1|CAC44372.1| 2269|Homo sapiens WDR9 protein, form B p... 30 7.6
AJ292465-1|CAC44371.1| 2320|Homo sapiens WDR9 protein, form A pr... 30 7.6
AJ238214-1|CAC37033.2| 2269|Homo sapiens hypothetical protein pr... 30 7.6
AB080587-1|BAD74072.1| 2199|Homo sapiens WD repeat protein WDR9-... 30 7.6
AB080586-1|BAD74071.1| 2269|Homo sapiens WD repeat protein protein. 30 7.6
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 140 bits (338), Expect = 5e-33
Identities = 60/85 (70%), Positives = 73/85 (85%)
Frame = +1
Query: 1 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAXRKMPLRRAVRYLKNVIEKKECIPF 180
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA A + M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 181 RRFNGGVGRCAQAKQFGTTQGRWPK 255
RR+NGGVGRCAQAKQ+G TQGRWPK
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPK 85
Score = 130 bits (313), Expect = 5e-30
Identities = 64/109 (58%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Frame = +3
Query: 210 CSSKAVWHNT-GSLAQKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRT 386
C+ W T G +KSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRT
Sbjct: 70 CAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRT 129
Query: 387 YRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPAKKSFPRKSLR 533
YRAHGRINPYMSSPCHIE+ L+E+E V + P ++ KK +K L+
Sbjct: 130 YRAHGRINPYMSSPCHIEMILTEKEQIVPK--PEEEVAQKKKISQKKLK 176
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 140 bits (338), Expect = 5e-33
Identities = 60/85 (70%), Positives = 73/85 (85%)
Frame = +1
Query: 1 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAXRKMPLRRAVRYLKNVIEKKECIPF 180
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA A + M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 181 RRFNGGVGRCAQAKQFGTTQGRWPK 255
RR+NGGVGRCAQAKQ+G TQGRWPK
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPK 85
Score = 130 bits (313), Expect = 5e-30
Identities = 64/109 (58%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Frame = +3
Query: 210 CSSKAVWHNT-GSLAQKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRT 386
C+ W T G +KSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRT
Sbjct: 70 CAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRT 129
Query: 387 YRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPAKKSFPRKSLR 533
YRAHGRINPYMSSPCHIE+ L+E+E V + P ++ KK +K L+
Sbjct: 130 YRAHGRINPYMSSPCHIEMILTEKEQIVPK--PEEEVAQKKKISQKKLK 176
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 140 bits (338), Expect = 5e-33
Identities = 60/85 (70%), Positives = 73/85 (85%)
Frame = +1
Query: 1 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAXRKMPLRRAVRYLKNVIEKKECIPF 180
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA A + M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 181 RRFNGGVGRCAQAKQFGTTQGRWPK 255
RR+NGGVGRCAQAKQ+G TQGRWPK
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPK 85
Score = 126 bits (305), Expect = 5e-29
Identities = 63/109 (57%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Frame = +3
Query: 210 CSSKAVWHNT-GSLAQKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRT 386
C+ W T G +KSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRT
Sbjct: 70 CAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRT 129
Query: 387 YRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPAKKSFPRKSLR 533
YRA GRINPYMSSPCHIE+ L+E+E V + P ++ KK +K L+
Sbjct: 130 YRARGRINPYMSSPCHIEMILTEKEQIVPK--PEEEVAQKKKISQKKLK 176
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 140 bits (338), Expect = 5e-33
Identities = 60/85 (70%), Positives = 73/85 (85%)
Frame = +1
Query: 1 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAXRKMPLRRAVRYLKNVIEKKECIPF 180
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA A + M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 181 RRFNGGVGRCAQAKQFGTTQGRWPK 255
RR+NGGVGRCAQAKQ+G TQGRWPK
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPK 85
Score = 130 bits (313), Expect = 5e-30
Identities = 64/109 (58%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Frame = +3
Query: 210 CSSKAVWHNT-GSLAQKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRT 386
C+ W T G +KSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRT
Sbjct: 70 CAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRT 129
Query: 387 YRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPAKKSFPRKSLR 533
YRAHGRINPYMSSPCHIE+ L+E+E V + P ++ KK +K L+
Sbjct: 130 YRAHGRINPYMSSPCHIEMILTEKEQIVPK--PEEEVAQKKKISQKKLK 176
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 140 bits (338), Expect = 5e-33
Identities = 60/85 (70%), Positives = 73/85 (85%)
Frame = +1
Query: 1 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAXRKMPLRRAVRYLKNVIEKKECIPF 180
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA A + M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 181 RRFNGGVGRCAQAKQFGTTQGRWPK 255
RR+NGGVGRCAQAKQ+G TQGRWPK
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPK 85
Score = 130 bits (313), Expect = 5e-30
Identities = 64/109 (58%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Frame = +3
Query: 210 CSSKAVWHNT-GSLAQKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRT 386
C+ W T G +KSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRT
Sbjct: 70 CAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRT 129
Query: 387 YRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPAKKSFPRKSLR 533
YRAHGRINPYMSSPCHIE+ L+E+E V + P ++ KK +K L+
Sbjct: 130 YRAHGRINPYMSSPCHIEMILTEKEQIVPK--PEEEVAQKKKISQKKLK 176
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 140 bits (338), Expect = 5e-33
Identities = 60/85 (70%), Positives = 73/85 (85%)
Frame = +1
Query: 1 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAXRKMPLRRAVRYLKNVIEKKECIPF 180
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA A + M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 181 RRFNGGVGRCAQAKQFGTTQGRWPK 255
RR+NGGVGRCAQAKQ+G TQGRWPK
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPK 85
Score = 130 bits (313), Expect = 5e-30
Identities = 64/109 (58%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Frame = +3
Query: 210 CSSKAVWHNT-GSLAQKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRT 386
C+ W T G +KSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRT
Sbjct: 70 CAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRT 129
Query: 387 YRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPAKKSFPRKSLR 533
YRAHGRINPYMSSPCHIE+ L+E+E V + P ++ KK +K L+
Sbjct: 130 YRAHGRINPYMSSPCHIEMILTEKEQIVPK--PEEEVAQKKKISQKKLK 176
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 140 bits (338), Expect = 5e-33
Identities = 60/85 (70%), Positives = 73/85 (85%)
Frame = +1
Query: 1 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAXRKMPLRRAVRYLKNVIEKKECIPF 180
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA A + M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 181 RRFNGGVGRCAQAKQFGTTQGRWPK 255
RR+NGGVGRCAQAKQ+G TQGRWPK
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPK 85
Score = 130 bits (313), Expect = 5e-30
Identities = 64/109 (58%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Frame = +3
Query: 210 CSSKAVWHNT-GSLAQKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRT 386
C+ W T G +KSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRT
Sbjct: 70 CAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRT 129
Query: 387 YRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPAKKSFPRKSLR 533
YRAHGRINPYMSSPCHIE+ L+E+E V + P ++ KK +K L+
Sbjct: 130 YRAHGRINPYMSSPCHIEMILTEKEQIVPK--PEEEVAQKKKISQKKLK 176
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 75.4 bits (177), Expect = 2e-13
Identities = 32/55 (58%), Positives = 45/55 (81%)
Frame = +3
Query: 294 ESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSER 458
+SNA+ K LD+D L+I+ IQVN+AP + TYRAHG+INPY++S CHIE+ L+E+
Sbjct: 35 QSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYRAHGQINPYVTSACHIEMILTEK 89
>BC107047-1|AAI07048.1| 224|Homo sapiens dickkopf homolog 4
(Xenopus laevis) protein.
Length = 224
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -3
Query: 366 ARDLPECGR*LACQRPKFCCQRLIQRS-SITARGIRRIFGPATLCCAKLLCLSTATNAAV 190
AR +C C KFC Q ++ T RG+RR +CC LC++
Sbjct: 35 ARKGSQCLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRDAMCCPGTLCVNDVCTTME 94
Query: 189 EAT 181
+AT
Sbjct: 95 DAT 97
>BC107046-1|AAI07047.1| 224|Homo sapiens dickkopf homolog 4
(Xenopus laevis) protein.
Length = 224
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -3
Query: 366 ARDLPECGR*LACQRPKFCCQRLIQRS-SITARGIRRIFGPATLCCAKLLCLSTATNAAV 190
AR +C C KFC Q ++ T RG+RR +CC LC++
Sbjct: 35 ARKGSQCLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRDAMCCPGTLCVNDVCTTME 94
Query: 189 EAT 181
+AT
Sbjct: 95 DAT 97
>AF177397-1|AAF02677.1| 224|Homo sapiens dickkopf-4 protein.
Length = 224
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -3
Query: 366 ARDLPECGR*LACQRPKFCCQRLIQRS-SITARGIRRIFGPATLCCAKLLCLSTATNAAV 190
AR +C C KFC Q ++ T RG+RR +CC LC++
Sbjct: 35 ARKGSQCLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRDAMCCPGTLCVNDVCTTME 94
Query: 189 EAT 181
+AT
Sbjct: 95 DAT 97
>AB018005-1|BAA33475.1| 224|Homo sapiens hdkk-4 protein.
Length = 224
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -3
Query: 366 ARDLPECGR*LACQRPKFCCQRLIQRS-SITARGIRRIFGPATLCCAKLLCLSTATNAAV 190
AR +C C KFC Q ++ T RG+RR +CC LC++
Sbjct: 35 ARKGSQCLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRDAMCCPGTLCVNDVCTTME 94
Query: 189 EAT 181
+AT
Sbjct: 95 DAT 97
>AB017788-1|BAA33438.1| 224|Homo sapiens hdkk-4 protein.
Length = 224
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -3
Query: 366 ARDLPECGR*LACQRPKFCCQRLIQRS-SITARGIRRIFGPATLCCAKLLCLSTATNAAV 190
AR +C C KFC Q ++ T RG+RR +CC LC++
Sbjct: 35 ARKGSQCLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRDAMCCPGTLCVNDVCTTLE 94
Query: 189 EAT 181
+AT
Sbjct: 95 DAT 97
>AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein.
Length = 198
Score = 30.3 bits (65), Expect = 5.7
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 332 ASYRPHSGKSRALPTQTYIPCSRSHQPLHVVSLPHR-SMSQRTRR 463
+S R HS S+ L +Q++ P SRSH P PH S S R+ R
Sbjct: 92 SSRRAHSSWSQNLHSQSHSPHSRSHSPHSRSHSPHSWSHSLRSSR 136
>AL163279-2|CAB90452.1| 2295|Homo sapiens homolog to cAMP response
element binding and betadogene protein.
Length = 2295
Score = 29.9 bits (64), Expect = 7.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 270 GIRRIFGPATLCCAKLLCLSTATNAAVE 187
GIR GP TLCC KL + AT ++
Sbjct: 1035 GIRYEVGPPTLCCLKLAFIDPATGKLMD 1062
>AJ292466-1|CAC44372.1| 2269|Homo sapiens WDR9 protein, form B
protein.
Length = 2269
Score = 29.9 bits (64), Expect = 7.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 270 GIRRIFGPATLCCAKLLCLSTATNAAVE 187
GIR GP TLCC KL + AT ++
Sbjct: 1009 GIRYEVGPPTLCCLKLAFIDPATGKLMD 1036
>AJ292465-1|CAC44371.1| 2320|Homo sapiens WDR9 protein, form A
protein.
Length = 2320
Score = 29.9 bits (64), Expect = 7.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 270 GIRRIFGPATLCCAKLLCLSTATNAAVE 187
GIR GP TLCC KL + AT ++
Sbjct: 1009 GIRYEVGPPTLCCLKLAFIDPATGKLMD 1036
>AJ238214-1|CAC37033.2| 2269|Homo sapiens hypothetical protein
protein.
Length = 2269
Score = 29.9 bits (64), Expect = 7.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 270 GIRRIFGPATLCCAKLLCLSTATNAAVE 187
GIR GP TLCC KL + AT ++
Sbjct: 1009 GIRYEVGPPTLCCLKLAFIDPATGKLMD 1036
>AB080587-1|BAD74072.1| 2199|Homo sapiens WD repeat protein WDR9-form2
protein.
Length = 2199
Score = 29.9 bits (64), Expect = 7.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 270 GIRRIFGPATLCCAKLLCLSTATNAAVE 187
GIR GP TLCC KL + AT ++
Sbjct: 1009 GIRYEVGPPTLCCLKLAFIDPATGKLMD 1036
>AB080586-1|BAD74071.1| 2269|Homo sapiens WD repeat protein protein.
Length = 2269
Score = 29.9 bits (64), Expect = 7.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 270 GIRRIFGPATLCCAKLLCLSTATNAAVE 187
GIR GP TLCC KL + AT ++
Sbjct: 1009 GIRYEVGPPTLCCLKLAFIDPATGKLMD 1036
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,485,707
Number of Sequences: 237096
Number of extensions: 1732497
Number of successful extensions: 3739
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3738
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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