Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0670
         (765 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0414 + 28778438-28778750,28779240-28779298,28779391-287795...    33   0.33 
01_06_0312 + 28396860-28397951                                         32   0.58 
01_01_0079 - 603019-603129,603302-603367,603489-603554,603681-60...    32   0.58 
01_06_1255 - 35769329-35769568                                         28   7.1  
05_04_0337 - 20372378-20373094,20373320-20373379,20373992-203742...    28   9.4  
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896...    28   9.4  

>02_05_0414 +
           28778438-28778750,28779240-28779298,28779391-28779522,
           28779612-28779752,28780213-28780269,28780841-28780981,
           28782037-28782230,28782347-28782413,28782593-28782726,
           28783023-28783089,28783381-28783443,28783848-28784086,
           28784176-28784305,28784384-28784476,28784726-28784929,
           28785116-28785400
          Length = 772

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 314 ESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSSQKERLLNITRSIEKS--RRSSLVE 478
           E K+A+S+TP  +  +R +   P STP  +  + K  LL      E+   R +SLVE
Sbjct: 644 EGKEASSLTPDSSNTERSTSEPPSSTPLSDPINNKVHLLRTMLQWEEQVRRGASLVE 700


>01_06_0312 + 28396860-28397951
          Length = 363

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +1

Query: 610 RAEIHDLPPASVRTLQSDAEDARAKRKRVTGNSGGASS 723
           RAE  +LPP+S R+L + A    A R RV   +GG++S
Sbjct: 121 RAEAGELPPSSFRSLAAAAAAGIASRGRVPVVAGGSNS 158


>01_01_0079 -
           603019-603129,603302-603367,603489-603554,603681-603824,
           603932-604429
          Length = 294

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +2

Query: 374 PSPGSTPFPNKSSQKERLLNITRSIEKSRRSSLVEVVPRTTKVMFAVQL 520
           PSP  +P PNK   +     + R     R   L ++VP  TKV     L
Sbjct: 195 PSPSPSPSPNKEQPQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTML 243


>01_06_1255 - 35769329-35769568
          Length = 79

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 338 TPKHTPVKRMSLPSPGSTPFPNKSSQKERL 427
           T  H PVKR    +P   P P +   KE +
Sbjct: 3   TSSHAPVKRCLSKAPSGNPLPRRGQVKESM 32


>05_04_0337 -
           20372378-20373094,20373320-20373379,20373992-20374266,
           20374358-20374619
          Length = 437

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = -1

Query: 510 ANITFVVLGTTSTKEDRLLFSIDRVIFNNLSFCELLFGNGVDPGEGRDMRLTG-VCLGVT 334
           A++ +  + TT        FS D ++ + +S C +   +G+D G G   R  G V    +
Sbjct: 174 ADLFYKAIVTTLQLSVTASFSFD-LMLSEISLCRVYKRSGIDDGHGHHQRPAGNVQASSS 232

Query: 333 DAAFLLSESNSG 298
            AA    E +SG
Sbjct: 233 SAAARPPEQHSG 244


>01_01_1130 +
           8959909-8960396,8960588-8960638,8960736-8960827,
           8960964-8961054,8961877-8961937,8962172-8962216,
           8962318-8962391,8962565-8962637,8963288-8963345,
           8963398-8963468,8963801-8963837,8964040-8964128,
           8964207-8964263,8964366-8964449,8964529-8964627,
           8964765-8964869,8965145-8965216,8965308-8965497,
           8965810-8966207
          Length = 744

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +2

Query: 245 LTGTVTPLKREGTFTK-DGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSS 412
           L  T+ PL+R   F + +G  + SE++++++     TP      P P   P P   +
Sbjct: 38  LPPTLAPLQRSLVFGRVEGEAMSSEARESSATAVDRTPPPTPPSPPPPPPPPPTNGT 94


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,463,292
Number of Sequences: 37544
Number of extensions: 288838
Number of successful extensions: 1004
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)