Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0670
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p... 31 0.90
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 29 2.7
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 29 2.7
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 29 2.7
Z37092-4|CAA85455.1| 890|Caenorhabditis elegans Hypothetical pr... 29 4.8
AC025716-12|AAK39604.1| 704|Caenorhabditis elegans Hypothetical... 29 4.8
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF099917-3|AAC68781.1| 310|Caenorhabditis elegans Hypothetical ... 28 6.3
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 28 6.3
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 28 8.4
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
protein F40G12.3 protein.
Length = 1099
Score = 31.1 bits (67), Expect = 0.90
Identities = 26/80 (32%), Positives = 35/80 (43%)
Frame = +2
Query: 257 VTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSSQKERLLNI 436
VT R T G +S KK + T T +S P S+ +KSS+ R I
Sbjct: 886 VTSSARSSAVTS-GLTNNSTEKKTQNST---TAASSVSTQVPNSSASSSKSSETTRTSQI 941
Query: 437 TRSIEKSRRSSLVEVVPRTT 496
K+ SS+ E+ PRTT
Sbjct: 942 PAFGTKTANSSVAELSPRTT 961
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 236 YLELTGTVTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSS 412
Y + G V P EG + ++ +++ V PK + ++ SP +P P +S
Sbjct: 6875 YTDKDGNVIPTNSEGKPIDENGQVLPKNEDGEFVKPKEADTTQSTIVSPDGSPLPTDAS 6933
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 236 YLELTGTVTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSS 412
Y + G V P EG + ++ +++ V PK + ++ SP +P P +S
Sbjct: 8368 YTDKDGNVIPTNSEGKPIDENGQVLPKNEDGEFVKPKEADTTQSTIVSPDGSPLPTDAS 8426
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 236 YLELTGTVTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSS 412
Y + G V P EG + ++ +++ V PK + ++ SP +P P +S
Sbjct: 9412 YTDKDGNVIPTNSEGKPIDENGQVLPKNEDGEFVKPKEADTTQSTIVSPDGSPLPTDAS 9470
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 236 YLELTGTVTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSS 412
Y + G V P EG + ++ +++ V PK + ++ SP +P P +S
Sbjct: 10131 YTDKDGNVIPTNSEGKPIDENGQVLPKNEDGEFVKPKEADTTQSTIVSPDGSPLPTDAS 10189
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 236 YLELTGTVTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSS 412
Y + G V P EG + ++ +++ V PK + ++ SP +P P +S
Sbjct: 7594 YTDKDGNVIPTNSEGKPIDENGQVLPKNEYGEFVKPKEADTTQSTIVSPDGSPLPTDAS 7652
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 236 YLELTGTVTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSS 412
Y + G V P EG + ++ +++ V PK + ++ SP +P P +S
Sbjct: 6920 YTDKDGNVIPTNSEGKPIDENGQVLPKNEDGEFVKPKEADTTQSTIVSPDGSPLPTDAS 6978
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 236 YLELTGTVTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSS 412
Y + G V P EG + ++ +++ V PK + ++ SP +P P +S
Sbjct: 8413 YTDKDGNVIPTNSEGKPIDENGQVLPKNEDGEFVKPKEADTTQSTIVSPDGSPLPTDAS 8471
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 236 YLELTGTVTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSS 412
Y + G V P EG + ++ +++ V PK + ++ SP +P P +S
Sbjct: 9457 YTDKDGNVIPTNSEGKPIDENGQVLPKNEDGEFVKPKEADTTQSTIVSPDGSPLPTDAS 9515
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 236 YLELTGTVTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSS 412
Y + G V P EG + ++ +++ V PK + ++ SP +P P +S
Sbjct: 10176 YTDKDGNVIPTNSEGKPIDENGQVLPKNEDGEFVKPKEADTTQSTIVSPDGSPLPTDAS 10234
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 236 YLELTGTVTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSS 412
Y + G V P EG + ++ +++ V PK + ++ SP +P P +S
Sbjct: 7639 YTDKDGNVIPTNSEGKPIDENGQVLPKNEYGEFVKPKEADTTQSTIVSPDGSPLPTDAS 7697
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 236 YLELTGTVTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSS 412
Y + G V P EG + ++ +++ V PK + ++ SP +P P +S
Sbjct: 6920 YTDKDGNVIPTNSEGKPIDENGQVLPKNEDGEFVKPKEADTTQSTIVSPDGSPLPTDAS 6978
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 236 YLELTGTVTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSS 412
Y + G V P EG + ++ +++ V PK + ++ SP +P P +S
Sbjct: 8413 YTDKDGNVIPTNSEGKPIDENGQVLPKNEDGEFVKPKEADTTQSTIVSPDGSPLPTDAS 8471
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 236 YLELTGTVTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSS 412
Y + G V P EG + ++ +++ V PK + ++ SP +P P +S
Sbjct: 9457 YTDKDGNVIPTNSEGKPIDENGQVLPKNEDGEFVKPKEADTTQSTIVSPDGSPLPTDAS 9515
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 236 YLELTGTVTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSS 412
Y + G V P EG + ++ +++ V PK + ++ SP +P P +S
Sbjct: 10176 YTDKDGNVIPTNSEGKPIDENGQVLPKNEDGEFVKPKEADTTQSTIVSPDGSPLPTDAS 10234
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 236 YLELTGTVTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSS 412
Y + G V P EG + ++ +++ V PK + ++ SP +P P +S
Sbjct: 7639 YTDKDGNVIPTNSEGKPIDENGQVLPKNEYGEFVKPKEADTTQSTIVSPDGSPLPTDAS 7697
>Z37092-4|CAA85455.1| 890|Caenorhabditis elegans Hypothetical
protein F44F4.4 protein.
Length = 890
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +2
Query: 239 LELTGTVTPLKREGTFTKDGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSSQK 418
L LT L+ F KD P L + + V P +TPV + + +PG S
Sbjct: 491 LGLTRLHVELRPSKFFLKDSPMLYMDRLRTNEVVPYYTPV-HVIVNNPGDL---TNDSNV 546
Query: 419 ERLLNITRSIE 451
ERL+ + +E
Sbjct: 547 ERLVELKEKLE 557
>AC025716-12|AAK39604.1| 704|Caenorhabditis elegans Hypothetical
protein Y39G10AR.15 protein.
Length = 704
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 344 KHTPVKRMSLP-SPGSTPFPNKSSQKERLLNITRSIEKSRRSSLV 475
KH P K + P +PG+TP +K +Q+E+ + + I K + S V
Sbjct: 296 KH-PSKVVQQPGAPGATPVASKPNQREQAEGLFKKIYKKKNSRAV 339
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 614 LKFTIYRPQAFVHFRATLKMREPNANASRETAVEPARKR 730
LK T R F+ F+A+ + + N N RET + A R
Sbjct: 1739 LKITFLRSHNFIKFKASFETSDINVNIFRETLLGLAHLR 1777
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 614 LKFTIYRPQAFVHFRATLKMREPNANASRETAVEPARKR 730
LK T R F+ F+A+ + + N N RET + A R
Sbjct: 1739 LKITFLRSHNFIKFKASFETSDINVNIFRETLLGLAHLR 1777
>AF099917-3|AAC68781.1| 310|Caenorhabditis elegans Hypothetical
protein F54D10.3 protein.
Length = 310
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 368 SLPSPGSTPFPNKSSQKERLLNITRSIEKSRRSSLVEVVPRTTKVMF 508
S+PSP S P PN ++ E ++ R E S + E + + K +F
Sbjct: 215 SIPSPISPPVPNPKAEDEEKPSLKRPRESSPAAVETERISQQIKRIF 261
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 28.3 bits (60), Expect = 6.3
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 2/126 (1%)
Frame = +2
Query: 242 ELTGTVTPLKREGTFTKDGPELDSESK-KAASVTPKHTPVKRMSLPSPGSTPFPNKSSQK 418
ELT + + K + D +S+ K SV K + K + P +S +
Sbjct: 2986 ELTKSEASRNVSSSSGKSQKQADVQSRPKLQSVQEKRSVPKVVKPLDPKGPQKEQESKKN 3045
Query: 419 ERLLNITR-SIEKSRRSSLVEVVPRTTKVMFAVQLITQLFSVSREKRLLSQT*RGSNKSF 595
E+++ T +++ SS + P + K A + T LF +EK++ S T S+
Sbjct: 3046 EKVVPSTNVTLDDQASSSSNQQGPGSAKKPSA-SIFTALFGRKKEKKMTSSTAESSSIPI 3104
Query: 596 VVEENE 613
EN+
Sbjct: 3105 PSPENQ 3110
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 257 VTPLKREGTFTKDGPE-LDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSSQKERLLN 433
+T L+ E T ++ E D E +A + V + + T S KE++ +
Sbjct: 537 ITRLENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTEASITSDRQIQSLKEKVDS 596
Query: 434 ITRSIEKSRR 463
+TR +E SRR
Sbjct: 597 LTRELESSRR 606
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 257 VTPLKREGTFTKDGPE-LDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNKSSQKERLLN 433
+T L+ E T ++ E D E +A + V + + T S KE++ +
Sbjct: 537 ITRLENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTEASITSDRQIQSLKEKVDS 596
Query: 434 ITRSIEKSRR 463
+TR +E SRR
Sbjct: 597 LTRELESSRR 606
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,474,991
Number of Sequences: 27780
Number of extensions: 264392
Number of successful extensions: 982
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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