Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0668
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ...    31   0.89 
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ...    31   0.89 
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ...    31   0.89 
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p...    30   1.6  
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p...    30   1.6  
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p...    30   1.6  
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF106592-2|AAK21364.1|  170|Caenorhabditis elegans Ferritin prot...    30   1.6  
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase...    30   1.6  
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AC006627-3|AAK85461.1|  504|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
           protein ZK250.9 protein.
          Length = 1466

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 255 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFANYSSMLR 386
           C N   +  Q EV++S  ++ M  YF + T  +  F+NY   LR
Sbjct: 136 CKNCNARFFQGEVSSSNDHINMCCYFGLTTTLQDRFSNYPDELR 179


>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
           protein Y16E11A.2 protein.
          Length = 1466

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 255 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFANYSSMLR 386
           C N   +  Q EV++S  ++ M  YF + T  +  F+NY   LR
Sbjct: 136 CKNCNARFFQGEVSSSNDHINMCCYFGLTTTLQDRFSNYPDELR 179


>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
           protein F59H6.5 protein.
          Length = 1486

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 255 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFANYSSMLR 386
           C N   +  Q EV++S  ++ M  YF + T  +  F+NY   LR
Sbjct: 136 CKNCNARFFQGEVSSSNDHINMCCYFGLTTTLQDRFSNYPDELR 179


>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
            protein F31B12.1c protein.
          Length = 1895

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 711  ACLSIIFLRVEPCRRGRVGPCTVRRGIPRTNSRPGW 604
            AC+ + FLR+  C  G+ G     R +P    RPG+
Sbjct: 1469 ACVDLAFLRIAVCDSGQNGRVVAHRVVPVKCIRPGF 1504


>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
            protein F31B12.1b protein.
          Length = 1868

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 711  ACLSIIFLRVEPCRRGRVGPCTVRRGIPRTNSRPGW 604
            AC+ + FLR+  C  G+ G     R +P    RPG+
Sbjct: 1469 ACVDLAFLRIAVCDSGQNGRVVAHRVVPVKCIRPGF 1504


>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
            protein F31B12.1a protein.
          Length = 1898

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 711  ACLSIIFLRVEPCRRGRVGPCTVRRGIPRTNSRPGW 604
            AC+ + FLR+  C  G+ G     R +P    RPG+
Sbjct: 1469 ACVDLAFLRIAVCDSGQNGRVVAHRVVPVKCIRPGF 1504


>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical protein
            F31B12.1c protein.
          Length = 1895

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 711  ACLSIIFLRVEPCRRGRVGPCTVRRGIPRTNSRPGW 604
            AC+ + FLR+  C  G+ G     R +P    RPG+
Sbjct: 1469 ACVDLAFLRIAVCDSGQNGRVVAHRVVPVKCIRPGF 1504


>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical protein
            F31B12.1b protein.
          Length = 1868

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 711  ACLSIIFLRVEPCRRGRVGPCTVRRGIPRTNSRPGW 604
            AC+ + FLR+  C  G+ G     R +P    RPG+
Sbjct: 1469 ACVDLAFLRIAVCDSGQNGRVVAHRVVPVKCIRPGF 1504


>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical protein
            F31B12.1a protein.
          Length = 1898

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 711  ACLSIIFLRVEPCRRGRVGPCTVRRGIPRTNSRPGW 604
            AC+ + FLR+  C  G+ G     R +P    RPG+
Sbjct: 1469 ACVDLAFLRIAVCDSGQNGRVVAHRVVPVKCIRPGF 1504


>AF106592-2|AAK21364.1|  170|Caenorhabditis elegans Ferritin protein
           2 protein.
          Length = 170

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 267 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFANY 371
           + KQI  E+ AS  YL+M  YF  D V  P  A +
Sbjct: 16  VNKQINIELYASYVYLSMSFYFDRDDVALPNIAKF 50



 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +2

Query: 353 PRLRELFFDAATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSW 499
           P + + F + + EEREHAT+L+    +RG   G V  L   + P N  W
Sbjct: 45  PNIAKFFKEQSDEEREHATELMRVQNLRG---GRVV-LQDIQKPENDEW 89


>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
            PLC210 protein.
          Length = 1898

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 711  ACLSIIFLRVEPCRRGRVGPCTVRRGIPRTNSRPGW 604
            AC+ + FLR+  C  G+ G     R +P    RPG+
Sbjct: 1469 ACVDLAFLRIAVCDSGQNGRVVAHRVVPVKCIRPGF 1504


>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical protein
            F28B4.3 protein.
          Length = 2229

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 459  PTSSRTGPPQTRRGRAAISPRARPQAG 539
            P +  T PPQT + +A ++P   PQ G
Sbjct: 1998 PITQATQPPQTVQTQAPVTPTQNPQTG 2024


>AC006627-3|AAK85461.1|  504|Caenorhabditis elegans Hypothetical
           protein E01A2.4 protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +2

Query: 626 RGIPRRTVQGPTRPRRQGSTLKKMMDKHAGPRRVSSSTRKLLP 754
           R  PRRT + P+ PRR+  +   +    + PRR  S +R   P
Sbjct: 105 RSPPRRTRRSPSPPRRRRISRSPVRRSRSPPRRQVSRSRSPPP 147


>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
            W06A7.3f protein.
          Length = 2488

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +2

Query: 608  PGRLFVRGIPRRTVQGPTRPRRQGSTLKKMMDKHAGPRRVSSSTRKLLPI 757
            PG++  R IP    Q PT P+R     K  + K A P   S S  +  P+
Sbjct: 1613 PGQVQERIIPIEVEQAPTIPQRPPRAPKSELPKVAKPLDDSKSRVRFAPL 1662


>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
            W06A7.3c protein.
          Length = 2484

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +2

Query: 608  PGRLFVRGIPRRTVQGPTRPRRQGSTLKKMMDKHAGPRRVSSSTRKLLPI 757
            PG++  R IP    Q PT P+R     K  + K A P   S S  +  P+
Sbjct: 1613 PGQVQERIIPIEVEQAPTIPQRPPRAPKSELPKVAKPLDDSKSRVRFAPL 1662


>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
            W06A7.3a protein.
          Length = 2607

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +2

Query: 608  PGRLFVRGIPRRTVQGPTRPRRQGSTLKKMMDKHAGPRRVSSSTRKLLPI 757
            PG++  R IP    Q PT P+R     K  + K A P   S S  +  P+
Sbjct: 1613 PGQVQERIIPIEVEQAPTIPQRPPRAPKSELPKVAKPLDDSKSRVRFAPL 1662


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,852,101
Number of Sequences: 27780
Number of extensions: 313044
Number of successful extensions: 789
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)