Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0667
         (658 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1066 + 33852402-33852815,33852936-33853019,33853203-338534...    31   1.1  
07_03_0249 - 15816515-15816868,15817749-15817958,15818051-158182...    28   5.7  
07_03_0698 - 20765305-20768526                                         28   7.5  
06_03_0029 - 15673494-15673871,15674193-15674375,15674425-156744...    28   7.5  
08_02_0859 + 21960172-21961121,21961244-21961304,21961406-21962527     27   9.9  

>02_05_1066 +
           33852402-33852815,33852936-33853019,33853203-33853454,
           33853643-33853708,33854784-33854849,33854935-33855003,
           33855829-33856165,33856438-33856541
          Length = 463

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/47 (34%), Positives = 18/47 (38%)
 Frame = -2

Query: 588 GAAEPPRSPDRTHRYVDRXRGKXRQHQYRSPYRHTFQKPLMFANMLC 448
           GAA PPR   R  R          +  Y SP    F  P   A+M C
Sbjct: 203 GAAAPPRQRQRARRGQATDPHSIAERVYHSPTTFPFSPPFFIASMPC 249


>07_03_0249 -
           15816515-15816868,15817749-15817958,15818051-15818245,
           15818318-15818393,15819982-15820021,15820155-15820283,
           15820363-15820405
          Length = 348

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -2

Query: 606 DTQASTGAAEPPRSPDRTH---RYVDRXRGKXRQHQYR 502
           D     G +   +S DR +   RY DR RG+ R H +R
Sbjct: 261 DVGGRDGGSRREKSGDRDYDRDRYYDRNRGRERSHDHR 298


>07_03_0698 - 20765305-20768526
          Length = 1073

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
 Frame = -2

Query: 621 RTIWTDTQASTGAAEPPRSPDRTHRYVDRXR-GKXRQHQYRSPYRHTFQKPLMFANMLCV 445
           R  WTD +       PP   + T   VD+ R  K R+    +  R    K L   N+L V
Sbjct: 392 RNPWTDEELHVALQRPPILSEITKAMVDKLRHPKERETDNEAEDRQRLAKKLSNENVLLV 451

Query: 444 RCSLH 430
              L+
Sbjct: 452 LSGLN 456


>06_03_0029 -
           15673494-15673871,15674193-15674375,15674425-15674478,
           15674592-15674756,15676478-15676720,15676810-15676896,
           15676995-15677225
          Length = 446

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -1

Query: 643 LAIHELCSYDMDGYSSEYWGS 581
           LA H  C YD+ G S+ YWGS
Sbjct: 413 LADHPAC-YDIQGGSNSYWGS 432


>08_02_0859 + 21960172-21961121,21961244-21961304,21961406-21962527
          Length = 710

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = -1

Query: 259 ILVQNCVYLVSNTINFLNLYKNILKAI*ANTFFKRINNAITNMWLYVFFML--SIIYFVP 86
           +L  NCVYLV ++ +   LYK  L  +     F++I +  T  W   F+ +  SI   +P
Sbjct: 266 VLQGNCVYLVWSSCDSERLYKFCLDDM--TISFQQILSQPTKPWCRAFWTVPASIESILP 323

Query: 85  NKLSVK 68
            ++S K
Sbjct: 324 MEISDK 329


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,845,498
Number of Sequences: 37544
Number of extensions: 333164
Number of successful extensions: 751
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)