Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0664
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.72 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.96 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   3.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   3.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   3.9  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   5.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 289 LPEVMLGLLPGGGGTQRLPALTSIPTTLDLAL 384
           L E  +G + G GGT  +   TS+ T++ LA+
Sbjct: 282 LLEPAVGTMTGAGGTAIVSISTSVSTSVYLAI 313


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 332  VPPPPGKSPNMTSGSPNPVLESF 264
            VPPP G S   ++GS +P +  F
Sbjct: 1111 VPPPSGSSGPGSTGSKSPPVAGF 1133


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 449 LLDQVWVSLRKIQPNTSKL*YTD 517
           LL Q W+S+    PN  KL  T+
Sbjct: 225 LLSQAWISVHIWSPNCDKLSSTE 247


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 449 LLDQVWVSLRKIQPNTSKL*YTD 517
           LL Q W+S+    PN  KL  T+
Sbjct: 458 LLSQAWISVHIWSPNCDKLSSTE 480


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 449 LLDQVWVSLRKIQPNTSKL*YTD 517
           LL Q W+S+    PN  KL  T+
Sbjct: 458 LLSQAWISVHIWSPNCDKLSSTE 480


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = -2

Query: 613 HKLPCITIAVIFCTRPFFDLSTIIFPAAISFAICILQFRGIWLYFP 476
           H L C    +IF     F L    F  A+   +CI  F   ++ FP
Sbjct: 265 HLLFCCAF-IIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFIIFP 309



 Score = 22.6 bits (46), Expect = 2.9
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -2

Query: 637 AFLKYDVFHKLPCITIAVIFCTRPFFDLSTIIFPAAISFAICILQF 500
           AF+ + V H L  + I   +     F  + IIF   + F +CI  F
Sbjct: 244 AFILFTV-HLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYF 288


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 577 CTRPFFDLSTIIFPAAISFAICILQFRGIWLY 482
           CTR  F  S ++    I   +  + F   WLY
Sbjct: 31  CTRSNFRSSKLLILYNIILQVLFVSFVSYWLY 62


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 577 CTRPFFDLSTIIFPAAISFAICILQFRGIWLY 482
           CTR  F  S ++    I   +  + F   WLY
Sbjct: 49  CTRSNFRSSKLLILYNIILQVLFVSFVSYWLY 80


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 328 GTQRLPALTSIPTTLDLALTGKTV 399
           G     ALT +    ++A+TGKTV
Sbjct: 249 GLDSFMALTVMQVLKEMAMTGKTV 272


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 328 GTQRLPALTSIPTTLDLALTGKTV 399
           G     ALT +    ++A+TGKTV
Sbjct: 249 GLDSFMALTVMQVLKEMAMTGKTV 272


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 323 PPGKSPNMTSGSPNP 279
           P G +PN +S SP P
Sbjct: 60  PSGNTPNKSSTSPYP 74


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 332 VPPPPGKSPNMTSGSPNPVL 273
           +PP PG SP+    S +P +
Sbjct: 230 IPPHPGLSPHPPHLSSHPAI 249


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 332 VPPPPGKSPNMTSGSPNPVL 273
           +PP PG SP+    S +P +
Sbjct: 122 IPPHPGLSPHPPHLSSHPAI 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,935
Number of Sequences: 336
Number of extensions: 3641
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)