Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0661
(411 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 112 2e-26
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 112 2e-26
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 100 1e-22
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 98 4e-22
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 73 1e-14
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 51 6e-08
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 5e-05
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 30 0.12
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 29 0.37
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.37
SPCC1906.01 |mpg1||mannose-1-phosphate guanyltransferase Mpg1|Sc... 27 1.5
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 1.5
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 2.6
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 26 2.6
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 4.6
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 25 6.1
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 6.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 6.1
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 24 8.0
SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|ch... 24 8.0
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 112 bits (269), Expect = 2e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 89.8 bits (213), Expect = 1e-19
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVTDGGKPKIKVAYKGEDKTFFP 411
PHNTIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF P
Sbjct: 61 PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTP 114
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 112 bits (269), Expect = 2e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 93.5 bits (222), Expect = 1e-20
Identities = 39/54 (72%), Positives = 46/54 (85%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVTDGGKPKIKVAYKGEDKTFFP 411
PHNTIFDAKRLIGRKF+D VQ+DMKHWPF+V++ GKP ++V YKGE KTF P
Sbjct: 61 PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTP 114
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 100 bits (239), Expect = 1e-22
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
Score = 75.4 bits (177), Expect = 3e-15
Identities = 31/52 (59%), Positives = 39/52 (75%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVTDGGKPKIKVAYKGEDKTF 405
P NT+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQF 116
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 98.3 bits (234), Expect = 4e-22
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNP 94
Score = 63.3 bits (147), Expect = 1e-11
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVTDGGKPKIKVAYKGEDKTFFP 411
P NTIFD KRLIGRKF++ T+ D+K +PF +V D +P ++V G+ K F P
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTP 147
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 73.3 bits (172), Expect = 1e-14
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 247
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 248 NPTTQY 265
NP +
Sbjct: 109 NPENTF 114
Score = 42.3 bits (95), Expect = 3e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 348
P NT F KRLIGR+F++ VQ D+K P+++V
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIV 142
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 51.2 bits (117), Expect = 6e-08
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +2
Query: 68 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 247
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 248 N 250
N
Sbjct: 63 N 63
Score = 25.0 bits (52), Expect = 4.6
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVTD-GGKPKIKVAYKGEDKTF 405
NT+ KRL GR ++D ++ ++ +T+ G KV Y E+ F
Sbjct: 66 NTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAF 116
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.5 bits (93), Expect = 5e-05
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 250
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 30.3 bits (65), Expect = 0.12
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTT 259
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPA- 83
Query: 260 QYSMPNV 280
+S+ NV
Sbjct: 84 -HSIRNV 89
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 28.7 bits (61), Expect = 0.37
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 179 PSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLC 313
P +A T ER++ AAK A+N T Y++ ++ D K++ C
Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIEC 1296
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.37
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 75 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 170
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPCC1906.01 |mpg1||mannose-1-phosphate guanyltransferase
Mpg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 363
Score = 26.6 bits (56), Expect = 1.5
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 356 PSVTTSKGQCFMSACTVASSNLRPMRRLASNIVLWGSSPPGSWRHL 219
P+VT G + SS +R + S+IV W S+ GSW L
Sbjct: 278 PNVTIGDGVRLQRCAILKSSRVRDHAWVKSSIVGWNST-LGSWSRL 322
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 1.5
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 108 TLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRTRWR*TPQHNI 266
T +L S+STG+ T++ T L + PS S+ P T + TP +NI
Sbjct: 282 TSSLTSNSTGK-----TSKTTDLLIAASKKSLPSNSTPSKPNTSFFETPHNNI 329
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 2.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 161 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 3
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.8 bits (54), Expect = 2.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 224 AAKNQVAMNPTTQYSMPNVSSDVSSKML 307
A K Q+ +NP + +PNV D + +L
Sbjct: 323 ARKRQIQLNPFPPWDVPNVLEDQMNSLL 350
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 4.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 61 QNGKSTRSRNRSGYHVLLRWCLPARE 138
+NGK T +R +S + W P++E
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE 502
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 24.6 bits (51), Expect = 6.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 360 ASIXDNLERPVLHVGLHSS 304
A + NL RP+ H LHSS
Sbjct: 408 APVIRNLPRPIYHQDLHSS 426
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.6 bits (51), Expect = 6.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 86 GIDLGTTYSCVGVFQHGKVEIIANDQGNR 172
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 24.6 bits (51), Expect = 6.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 191 AFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDV 292
AF D + G AK A P+T+ + N+S V
Sbjct: 155 AFYDASQTFGSTAKVAPAPAPSTKTPLANISKPV 188
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 24.2 bits (50), Expect = 8.0
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 105 RTLALVSSSTGR-WRSSPTTRATGPLRLMLRSQTPSVSSEMP 227
++L VSS++ + RSSP +L R TP+V + P
Sbjct: 351 QSLTTVSSNSSQNGRSSPKKSFLSKFKLTSRPSTPNVGNTAP 392
>SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 272
Score = 24.2 bits (50), Expect = 8.0
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 96 WVPRTLALVSSSTGRWRSSPTTRATGP-LRLMLRSQTPSVSS 218
W R + SSS R RSS ++R + P LRS S+SS
Sbjct: 90 WANRHSNVSSSSGSRGRSSVSSRDSSPSYSGALRSAERSISS 131
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,856,474
Number of Sequences: 5004
Number of extensions: 39145
Number of successful extensions: 144
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 142254980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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