Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0654
         (686 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0113 - 12715888-12716181,12717443-12717602,12718327-127183...    31   0.86 
08_01_0781 + 7570485-7570796,7570808-7570885,7570963-7571562           30   1.5  
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204...    30   2.0  
07_01_0624 + 4651995-4654715                                           29   3.5  
02_03_0103 + 15244812-15245180,15245258-15245851                       29   3.5  

>08_02_0113 -
           12715888-12716181,12717443-12717602,12718327-12718368,
           12718443-12718465,12718616-12720653,12720736-12720965,
           12722207-12722329,12722438-12723010,12724684-12724733,
           12726828-12726923,12726987-12727394,12727609-12727795
          Length = 1407

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = +3

Query: 111 YQQHNQKNEYRNFNRCWGRSTRKFGNNSSEFPDKPKRAKVHSRKQRTILRSKGLTDTE 284
           Y  +  KN    FN CW +       NS +F       +  SRK  T++ S G  D E
Sbjct: 70  YSSNAPKNRAFQFNHCWLKL-----RNSPKFQTLESHKRPRSRKSSTLIESAGEEDEE 122


>08_01_0781 + 7570485-7570796,7570808-7570885,7570963-7571562
          Length = 329

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = +3

Query: 111 YQQHNQKNEYRNFNRCWGRSTRKFGNNSSEFPDKPKRAKVHSRKQRTILRSKGLTDTE 284
           Y  +  KN    FN CW +       NS +F       +  SRK  T ++S G  D E
Sbjct: 138 YSSNASKNRAFKFNHCWLKL-----RNSPKFQTLESHKRPRSRKSSTPIKSAGEEDEE 190


>01_05_0292 +
           20518668-20519090,20519213-20519281,20520204-20520473,
           20520734-20521084,20521251-20521528,20522755-20523099,
           20523346-20523911,20525155-20525528
          Length = 891

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +3

Query: 108 SYQQHNQKNEYRNFNRCWGRSTRKFGNNSSEFPDKPKRAKVHSR-KQRTILRSKGLTDTE 284
           S ++H+  ++ R+     GRS  +  ++S  +   PKR++ HSR + R+  RS+  + T 
Sbjct: 576 SSRRHDYGDDGRSRRSGRGRSRSRSRSDSDRYSRSPKRSRRHSRSRTRSRSRSRSRSYTR 635

Query: 285 IQKA 296
            ++A
Sbjct: 636 NRRA 639


>07_01_0624 + 4651995-4654715
          Length = 906

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +3

Query: 261 SKGLTDTEIQKALEKCMNLVEFPSMSSE----LMFFHQSRSSWFRD 386
           S G+TD   + +L+K  NLV+    SS+    LMF  +   SWF D
Sbjct: 532 SDGVTDGSRRVSLQKDGNLVQAAKCSSQLRSMLMFTEEISLSWFTD 577


>02_03_0103 + 15244812-15245180,15245258-15245851
          Length = 320

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/58 (31%), Positives = 23/58 (39%)
 Frame = +3

Query: 111 YQQHNQKNEYRNFNRCWGRSTRKFGNNSSEFPDKPKRAKVHSRKQRTILRSKGLTDTE 284
           Y  +  KN    FN CW +       NS +F       +  SRK  T + S G  D E
Sbjct: 131 YSSNAPKNRAFQFNHCWLKL-----RNSPKFQTLKSHKRPRSRKSSTPIESAGEEDEE 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,661,100
Number of Sequences: 37544
Number of extensions: 319757
Number of successful extensions: 812
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)