Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0652
         (470 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    60   9e-12
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    60   9e-12
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    54   1e-09
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    46   2e-07
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    45   4e-07
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    45   4e-07
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   1.2  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           22   3.8  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           22   3.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   5.0  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   8.8  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   8.8  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   8.8  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 60.5 bits (140), Expect = 9e-12
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = +3

Query: 3   SCRGNRSCPIDQHHRNQCQFCRLRKCLKMGMRREAVQRGR 122
           +CR  +SC ID+  RN+CQ+CR +KCL MGM+REAVQ  R
Sbjct: 145 ACREEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEER 184



 Score = 49.2 bits (112), Expect = 2e-08
 Identities = 22/54 (40%), Positives = 32/54 (59%)
 Frame = +1

Query: 304 IDNICELAARLLFSAVEWARNIPFFPELQVTDQVALLRLVWSELFVLNASKCSM 465
           + +IC    + LF  V WA++IP F  L + DQV LLR  W+EL + + S  S+
Sbjct: 231 VSHICNATNKQLFQLVAWAKHIPHFTSLPLEDQVLLLRAGWNELLIASFSHRSI 284


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 60.5 bits (140), Expect = 9e-12
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = +3

Query: 3   SCRGNRSCPIDQHHRNQCQFCRLRKCLKMGMRREAVQRGR 122
           +CR  +SC ID+  RN+CQ+CR +KCL MGM+REAVQ  R
Sbjct: 145 ACREEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEER 184



 Score = 49.2 bits (112), Expect = 2e-08
 Identities = 22/54 (40%), Positives = 32/54 (59%)
 Frame = +1

Query: 304 IDNICELAARLLFSAVEWARNIPFFPELQVTDQVALLRLVWSELFVLNASKCSM 465
           + +IC    + LF  V WA++IP F  L + DQV LLR  W+EL + + S  S+
Sbjct: 231 VSHICNATNKQLFQLVAWAKHIPHFTSLPLEDQVLLLRAGWNELLIASFSHRSI 284


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 53.6 bits (123), Expect = 1e-09
 Identities = 21/40 (52%), Positives = 31/40 (77%)
 Frame = +3

Query: 6   CRGNRSCPIDQHHRNQCQFCRLRKCLKMGMRREAVQRGRV 125
           C  N+ C I + +RN+CQ+CRL+KC+ +GM R+AV+ GRV
Sbjct: 104 CTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRV 143


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 46.4 bits (105), Expect = 2e-07
 Identities = 18/35 (51%), Positives = 24/35 (68%)
 Frame = +3

Query: 6   CRGNRSCPIDQHHRNQCQFCRLRKCLKMGMRREAV 110
           C+   +C ID + R +CQ CRL+KCL +GMR E V
Sbjct: 223 CKYGNNCEIDMYMRRKCQECRLKKCLTVGMRPECV 257



 Score = 32.7 bits (71), Expect = 0.002
 Identities = 16/49 (32%), Positives = 29/49 (59%)
 Frame = +1

Query: 310 NICELAARLLFSAVEWARNIPFFPELQVTDQVALLRLVWSELFVLNASK 456
           +I E+    +   VE+++ +P F EL   DQ+ALL+   SE+ +L  ++
Sbjct: 377 HITEITILTVQLIVEFSKRLPGFDELMREDQIALLKACSSEVMMLRMAR 425


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 45.2 bits (102), Expect = 4e-07
 Identities = 16/33 (48%), Positives = 25/33 (75%)
 Frame = +3

Query: 6   CRGNRSCPIDQHHRNQCQFCRLRKCLKMGMRRE 104
           C  N+ C I + +RN+CQ+CRL+KC+ +GM R+
Sbjct: 55  CTKNQQCSILRINRNRCQYCRLKKCIAVGMSRD 87


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 45.2 bits (102), Expect = 4e-07
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = +3

Query: 6   CRGNRSCPIDQHHRNQCQFCRLRKCLKMGMRREAV 110
           C+   +C ID + R +CQ CRL+KCL +GMR E +
Sbjct: 20  CKYGNNCEIDMYMRRKCQECRLKKCLTVGMRPECM 54


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 202 TIIHISRRTYRCYCGRSY 255
           T++  S  TY CY G++Y
Sbjct: 648 TLVATSMPTYICYLGKAY 665


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 371 PSSPNCKLRTKSPY*GSSGRNCS 439
           PS P C+   K    G+ GR C+
Sbjct: 82  PSPPFCEKNPKLGILGTHGRQCN 104


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 371 PSSPNCKLRTKSPY*GSSGRNCS 439
           PS P C+   K    G+ GR C+
Sbjct: 83  PSPPFCEKNPKLGILGTHGRQCN 105


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 14/47 (29%), Positives = 18/47 (38%)
 Frame = -3

Query: 354 FDGGEKQSGSELADVVYAHDVRWLDAWTVSRGGVAPPAVAAICTTRD 214
           FD G       + DV Y +   WL    + RG      +    TTRD
Sbjct: 50  FDKGINWRSYVVCDVAYNNVNNWLWTPFIERGPANRMYIEIKFTTRD 96


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 232 RCYCGRSYPASRYSPCV 282
           R  CGRS     ++PC+
Sbjct: 107 RVRCGRSLEGYPFNPCL 123


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 232 RCYCGRSYPASRYSPCV 282
           R  CGRS     ++PC+
Sbjct: 123 RVRCGRSLEGYPFNPCL 139


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 426 PDEPQ*GDLVRNLQFGEEGDV 364
           PDEP   ++  NLQ    GD+
Sbjct: 102 PDEPAGAEIPSNLQLYLGGDL 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,062
Number of Sequences: 438
Number of extensions: 2871
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)