BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0651
(536 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 54 7e-10
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 54 7e-10
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 42 4e-06
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 40 2e-05
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 38 5e-05
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 38 5e-05
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 22 3.5
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 22 3.5
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 3.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 4.6
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 6.0
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 54.4 bits (125), Expect = 7e-10
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 3 SCRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRREAVQ 113
+CR +S ID+ RN CQ+CR +KCL MGM+REAVQ
Sbjct: 145 ACREEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQ 181
Score = 46.8 bits (106), Expect = 1e-07
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +1
Query: 304 IDNICELAARLLFSAVEWARNIPFFPELQGTDQXALLRVVWSELFVLNASQCSMPLHVG 480
+ +IC + LF V WA++IP F L DQ LLR W+EL + + S S+ + G
Sbjct: 231 VSHICNATNKQLFQLVAWAKHIPHFTSLPLEDQVLLLRAGWNELLIASFSHRSIDVKDG 289
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 54.4 bits (125), Expect = 7e-10
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 3 SCRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRREAVQ 113
+CR +S ID+ RN CQ+CR +KCL MGM+REAVQ
Sbjct: 145 ACREEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQ 181
Score = 46.8 bits (106), Expect = 1e-07
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +1
Query: 304 IDNICELAARLLFSAVEWARNIPFFPELQGTDQXALLRVVWSELFVLNASQCSMPLHVG 480
+ +IC + LF V WA++IP F L DQ LLR W+EL + + S S+ + G
Sbjct: 231 VSHICNATNKQLFQLVAWAKHIPHFTSLPLEDQVLLLRAGWNELLIASFSHRSIDVKDG 289
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 41.9 bits (94), Expect = 4e-06
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 6 CRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRREAVQ 113
C N+ I + +RN CQ+CR +KC+ +GM R+AV+
Sbjct: 104 CTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVR 139
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 39.5 bits (88), Expect = 2e-05
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 6 CRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRREAV 110
C+ + ID + R CQ CR +KCL +GMR E V
Sbjct: 223 CKYGNNCEIDMYMRRKCQECRLKKCLTVGMRPECV 257
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 38.3 bits (85), Expect = 5e-05
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 6 CRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRRE 104
C N+ I + +RN CQ+CR +KC+ +GM R+
Sbjct: 55 CTKNQQCSILRINRNRCQYCRLKKCIAVGMSRD 87
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 38.3 bits (85), Expect = 5e-05
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 6 CRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRREAV 110
C+ + ID + R CQ CR +KCL +GMR E +
Sbjct: 20 CKYGNNCEIDMYMRRKCQECRLKKCLTVGMRPECM 54
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 22.2 bits (45), Expect = 3.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +2
Query: 371 PSSPNCKVRTKXPY*GSSGRNCS 439
PS P C+ K G+ GR C+
Sbjct: 82 PSPPFCEKNPKLGILGTHGRQCN 104
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 22.2 bits (45), Expect = 3.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +2
Query: 371 PSSPNCKVRTKXPY*GSSGRNCS 439
PS P C+ K G+ GR C+
Sbjct: 83 PSPPFCEKNPKLGILGTHGRQCN 105
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 472 HVGPLTXRRGTAPSPIXGRP 531
H P +RG+ P+P G P
Sbjct: 28 HQSPQAPQRGSPPNPSQGPP 47
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 4.6
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 104 FSSHAHFETFPXSAELTXVSMVLVNGAAPVSSA 6
++SH H T VS++L++ A+P S+
Sbjct: 123 YTSHQHLRTHLRGTLTVNVSVLLLSLASPDESS 155
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.4 bits (43), Expect = 6.0
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = -3
Query: 354 FDGGEKQSGSELADVVYAHDVRWLDAWTVSRGGVAPPAVXAICTTRD 214
FD G + DV Y + WL + RG + TTRD
Sbjct: 50 FDKGINWRSYVVCDVAYNNVNNWLWTPFIERGPANRMYIEIKFTTRD 96
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,312
Number of Sequences: 438
Number of extensions: 3039
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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