Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0649
(459 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 70 9e-13
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 70 9e-13
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 70 9e-13
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 48 3e-06
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 48 3e-06
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 48 4e-06
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 48 4e-06
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 48 4e-06
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 44 5e-05
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 44 5e-05
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 44 5e-05
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 40 7e-04
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 40 9e-04
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 40 0.001
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 40 0.001
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 40 0.001
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 40 0.001
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 37 0.008
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 37 0.008
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 37 0.008
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 36 0.019
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 36 0.019
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 35 0.025
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 35 0.025
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 35 0.033
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 34 0.043
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 34 0.043
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 34 0.043
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 34 0.043
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 34 0.043
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 34 0.043
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 34 0.057
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 34 0.057
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 34 0.057
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 34 0.057
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 33 0.076
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 33 0.100
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 33 0.100
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 33 0.13
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 33 0.13
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 32 0.17
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 32 0.17
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 31 0.30
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 31 0.30
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 31 0.53
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 31 0.53
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 31 0.53
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 31 0.53
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 31 0.53
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 31 0.53
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 30 0.70
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 30 0.70
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 30 0.70
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 30 0.70
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 30 0.70
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 30 0.93
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 29 1.6
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 29 1.6
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 29 1.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 2.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 2.1
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 29 2.1
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 29 2.1
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 28 2.8
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 28 2.8
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 28 2.8
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 28 2.8
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 28 3.8
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 27 5.0
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 27 5.0
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 27 5.0
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 27 5.0
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 27 5.0
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 27 5.0
AC024793-5|AAF60689.1| 79|Caenorhabditis elegans Hypothetical ... 27 5.0
U39853-2|AAK39225.1| 771|Caenorhabditis elegans Kinase suppress... 27 6.6
U38820-1|AAA92436.1| 771|Caenorhabditis elegans KSR-1 protein. 27 6.6
U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin prote... 27 6.6
S80647-1|AAB35769.1| 771|Caenorhabditis elegans KSR-1 protein. 27 6.6
U88175-6|AAB42283.1| 234|Caenorhabditis elegans Hypothetical pr... 27 8.7
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 27 8.7
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 27 8.7
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 69.7 bits (163), Expect = 9e-13
Identities = 27/56 (48%), Positives = 42/56 (75%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAM 253
+VYVGGL ++LE FD++G++ VWVA PPGFAF+E++++++AEDA A+
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRAL 59
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 69.7 bits (163), Expect = 9e-13
Identities = 27/56 (48%), Positives = 42/56 (75%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAM 253
+VYVGGL ++LE FD++G++ VWVA PPGFAF+E++++++AEDA A+
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRAL 59
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 69.7 bits (163), Expect = 9e-13
Identities = 27/56 (48%), Positives = 42/56 (75%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAM 253
+VYVGGL ++LE FD++G++ VWVA PPGFAF+E++++++AEDA A+
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRAL 59
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 48.0 bits (109), Expect = 3e-06
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Frame = +2
Query: 68 MSSGGT---RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNP-PGFAFIEFENLQEAE 235
M GG+ +VYVG L ++++++E F KYG++ V + P FAF+EFE+ ++AE
Sbjct: 1 MPRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAE 60
Query: 236 DACSA 250
DA A
Sbjct: 61 DAVRA 65
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 48.0 bits (109), Expect = 3e-06
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Frame = +2
Query: 68 MSSGGT---RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNP-PGFAFIEFENLQEAE 235
M GG+ +VYVG L ++++++E F KYG++ V + P FAF+EFE+ ++AE
Sbjct: 1 MPRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAE 60
Query: 236 DACSA 250
DA A
Sbjct: 61 DAVRA 65
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 47.6 bits (108), Expect = 4e-06
Identities = 21/53 (39%), Positives = 36/53 (67%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDAC 244
R+Y+G + ++ D+ER YGK+N++ + GFAF++FE+ ++AEDAC
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---GFAFVDFEDSRDAEDAC 52
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 47.6 bits (108), Expect = 4e-06
Identities = 21/53 (39%), Positives = 36/53 (67%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDAC 244
R+Y+G + ++ D+ER YGK+N++ + GFAF++FE+ ++AEDAC
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---GFAFVDFEDSRDAEDAC 52
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 47.6 bits (108), Expect = 4e-06
Identities = 21/53 (39%), Positives = 36/53 (67%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDAC 244
R+Y+G + ++ D+ER YGK+N++ + GFAF++FE+ ++AEDAC
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---GFAFVDFEDSRDAEDAC 52
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 44.0 bits (99), Expect = 5e-05
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDA 241
R+Y+G L + ++D+E F YG++ V L GF F+EF++ ++AEDA
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV---LLKNGFGFVEFDDKRDAEDA 52
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 44.0 bits (99), Expect = 5e-05
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDA 241
R+Y+G L + ++D+E F YG++ V L GF F+EF++ ++AEDA
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV---LLKNGFGFVEFDDKRDAEDA 52
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 44.0 bits (99), Expect = 5e-05
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDA 241
R+Y+G L + ++D+E F YG++ V L GF F+EF++ ++AEDA
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV---LLKNGFGFVEFDDKRDAEDA 52
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 40.3 bits (90), Expect = 7e-04
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDA 241
RVY+G L D+E F YGKL+ V + GF F++F++ ++A+DA
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDV---IMKNGFGFVDFQDQRDADDA 51
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 39.9 bits (89), Expect = 9e-04
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 83 TRVYVGGLVEGIKKEDLEREFDKYGKLNS---VWVALNPPGFAFIEFENLQEAEDACSAM 253
T VYV + KE LE+ F K+G + S + V GF F+ F N +EAE A A+
Sbjct: 213 TNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 272
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 80 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAEDACS 247
G +YV L E + + L+++F+ YG + S V + GF F+ FE +EA A +
Sbjct: 316 GVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVT 375
Query: 248 AM 253
M
Sbjct: 376 EM 377
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 131 LEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDA 241
+E F G + S+W+A PPGFAF+ F+ A DA
Sbjct: 44 IEAVFSVMGPIKSIWMAKRPPGFAFVTFKRTVHAFDA 80
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 83 TRVYVGGLVEGIKKEDLEREFDKYGKLNS---VWVALNPPGFAFIEFENLQEAEDACSAM 253
T VYV + KE LE+ F K+G + S + V GF F+ F N +EAE A A+
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 212
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 80 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAEDACS 247
G +YV L E + + L+++F+ YG + S V + GF F+ FE +EA A +
Sbjct: 256 GVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVT 315
Query: 248 AM 253
M
Sbjct: 316 EM 317
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 83 TRVYVGGLVEGIKKEDLEREFDKYGKLNS---VWVALNPPGFAFIEFENLQEAEDACSAM 253
T VYV + KE LE+ F K+G + S + V GF F+ F N +EAE A A+
Sbjct: 150 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 209
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 80 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAEDACS 247
G +YV L E + + L+++F+ YG + S V + GF F+ FE +EA A +
Sbjct: 253 GVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVT 312
Query: 248 AM 253
M
Sbjct: 313 EM 314
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 83 TRVYVGGLVEGIKKEDLEREFDKYGKLNS---VWVALNPPGFAFIEFENLQEAEDACSAM 253
T VYV + KE LE+ F K+G + S + V GF F+ F N +EAE A A+
Sbjct: 213 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 272
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 80 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAEDACS 247
G +YV L E + + L+++F+ YG + S V + GF F+ FE +EA A +
Sbjct: 316 GVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVT 375
Query: 248 AM 253
M
Sbjct: 376 EM 377
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 36.7 bits (81), Expect = 0.008
Identities = 16/56 (28%), Positives = 34/56 (60%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAM 253
R++VGGL KE L++ F ++G + ++ P +A++ +EN +++AC ++
Sbjct: 252 RLFVGGLGSWCDKEILQKAFGEFGFVENIDYDHGQP-YAYVVYENTHTSQEACRSL 306
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 89 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVAL---NPPGFAFIEFENLQEAEDA 241
++VG + +K+ ++ F+++GK+ V + +AF+ F+ + +A A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 36.7 bits (81), Expect = 0.008
Identities = 16/56 (28%), Positives = 34/56 (60%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAM 253
R++VGGL KE L++ F ++G + ++ P +A++ +EN +++AC ++
Sbjct: 252 RLFVGGLGSWCDKEILQKAFGEFGFVENIDYDHGQP-YAYVVYENTHTSQEACRSL 306
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 89 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVAL---NPPGFAFIEFENLQEAEDA 241
++VG + +K+ ++ F+++GK+ V + +AF+ F+ + +A A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 36.7 bits (81), Expect = 0.008
Identities = 16/56 (28%), Positives = 34/56 (60%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAM 253
R++VGGL KE L++ F ++G + ++ P +A++ +EN +++AC ++
Sbjct: 229 RLFVGGLGSWCDKEILQKAFGEFGFVENIDYDHGQP-YAYVVYENTHTSQEACRSL 283
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 89 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVAL---NPPGFAFIEFENLQEAEDA 241
++VG + +K+ ++ F+++GK+ V + +AF+ F+ + +A A
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 201
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 35.5 bits (78), Expect = 0.019
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSV-W----VALNPPGFAFIEFENLQEAEDACS 247
+V+VGGL ++DL F+++GK++ + W FAFI FE + A+ A S
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASS 169
Score = 33.5 bits (73), Expect = 0.076
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +2
Query: 65 TMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEF 214
T + +++VGG+ + EDL F +YG++ V + GFAF+EF
Sbjct: 23 TKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 35.5 bits (78), Expect = 0.019
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSV-W----VALNPPGFAFIEFENLQEAEDACS 247
+V+VGGL ++DL F+++GK++ + W FAFI FE + A+ A S
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASS 169
Score = 33.5 bits (73), Expect = 0.076
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +2
Query: 65 TMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEF 214
T + +++VGG+ + EDL F +YG++ V + GFAF+EF
Sbjct: 23 TKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 35.1 bits (77), Expect = 0.025
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN---PPGFAFIEFENLQEAEDACSAM 253
R+YV + +++DL F YG++ SV + N GF F+ ++++ E A +A+
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAAL 110
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 35.1 bits (77), Expect = 0.025
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN---PPGFAFIEFENLQEAEDACSAM 253
R+YV + +++DL F YG++ SV + N GF F+ ++++ E A +A+
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAAL 110
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 34.7 bits (76), Expect = 0.033
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +2
Query: 89 VYVGGLVEGIKKEDLEREFDKYGKLNSVWV-----ALNPPGFAFIEFENLQEAEDACSAM 253
V+VG L + + E L+ F K+G+++ V G+ F+ F N Q AE+A + M
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +2
Query: 83 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAM 253
T VYVG + + DL F YG + V + +AF+ +E + A A M
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRI-FKTQRYAFVRYEKKECATKAIMEM 292
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.043
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDAC 244
+V++GGL ED+++ F+ YGK+ + + GF F+ F++ + A+ C
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 34.3 bits (75), Expect = 0.043
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 59 Y*TMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAED 238
Y S T VYVG + + ++++ + F +G++ V + G+AF++F+N A
Sbjct: 120 YNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRI-FKMQGYAFVKFDNKDAAAK 177
Query: 239 ACSAM 253
A M
Sbjct: 178 AIVQM 182
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.043
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 59 Y*TMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAED 238
Y S T VYVG + + ++++ + F +G++ V + G+AF++F+N A
Sbjct: 130 YNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRI-FKMQGYAFVKFDNKDAAAK 187
Query: 239 ACSAM 253
A M
Sbjct: 188 AIVQM 192
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 34.3 bits (75), Expect = 0.043
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 59 Y*TMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAED 238
Y S T VYVG + + ++++ + F +G++ V + G+AF++F+N A
Sbjct: 233 YNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRI-FKMQGYAFVKFDNKDAAAK 290
Query: 239 ACSAM 253
A M
Sbjct: 291 AIVQM 295
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 34.3 bits (75), Expect = 0.043
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 59 Y*TMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAED 238
Y S T VYVG + + ++++ + F +G++ V + G+AF++F+N A
Sbjct: 201 YNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRI-FKMQGYAFVKFDNKDAAAK 258
Query: 239 ACSAM 253
A M
Sbjct: 259 AIVQM 263
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.043
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDAC 244
+V++GGL ED+++ F+ YGK+ + + GF F+ F++ + A+ C
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 33.9 bits (74), Expect = 0.057
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +2
Query: 74 SGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAED 238
SG VYVG +E+L F G++N+V + + P GFAFIEF A+
Sbjct: 2 SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61
Query: 239 ACSAM 253
A M
Sbjct: 62 AVEQM 66
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 33.9 bits (74), Expect = 0.057
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDACSA 250
RVYV + + + DL+ F+ +G++ +A P GF ++EF NL +A +
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 251 M 253
M
Sbjct: 268 M 268
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 33.9 bits (74), Expect = 0.057
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDACSA 250
RVYV + + + DL+ F+ +G++ +A P GF ++EF NL +A +
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 251 M 253
M
Sbjct: 268 M 268
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 33.9 bits (74), Expect = 0.057
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDACSA 250
RVYV + + + DL+ F+ +G++ +A P GF ++EF NL +A +
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 251 M 253
M
Sbjct: 268 M 268
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 33.5 bits (73), Expect = 0.076
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Frame = +2
Query: 80 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNP-----PGFAFIEFENLQEAEDA 241
G V+V + E ++D+ +F +YGK+ ++ + L+ G+A +E+E +EA +A
Sbjct: 54 GWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEA 112
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 33.1 bits (72), Expect = 0.100
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 77 GGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN---PPGFAFIEFENLQEAEDA 241
G R++V + + DL+ F+K+G ++ V + N GF F+ E Q+AE A
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERA 208
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 33.1 bits (72), Expect = 0.100
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 77 GGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN---PPGFAFIEFENLQEAEDA 241
G R++V + + DL+ F+K+G ++ V + N GF F+ E Q+AE A
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERA 208
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 32.7 bits (71), Expect = 0.13
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +2
Query: 68 MSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEA 232
M+S G VYVG + +E++ F G +N+V + + P GFAF+EF A
Sbjct: 1 MASQGFSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGA 60
Query: 233 EDA 241
+ A
Sbjct: 61 QRA 63
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 32.7 bits (71), Expect = 0.13
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 89 VYVGGLVEGIKKEDLEREFDKYGKLNSVWV----ALNPPGFAFIEFENLQEAEDA 241
++VG + + L REF+ YGK+ + + A P G+AFIE+ + E A
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTA 160
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 32.3 bits (70), Expect = 0.17
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNP-----PGFAFIEFENLQEAEDACSA 250
R+++ L K++DL+ F KYG+++ V V ++ GFA +EF + A A SA
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSA 339
Query: 251 M 253
+
Sbjct: 340 L 340
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 32.3 bits (70), Expect = 0.17
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +2
Query: 89 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDA 241
VYVG + G E++E+ F G ++ V + + P GFA++EF + ++A
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNA 135
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 31.5 bits (68), Expect = 0.30
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVW 175
+V+VGGL +K+ D+ F +YG+L W
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGRLQVDW 118
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 31.5 bits (68), Expect = 0.30
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 86 RVYVGGLVEGI-KKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAM 253
RV++G + I ++D+ F +GK+ +V GF F++F A+++C ++
Sbjct: 84 RVFIGNIARAIITRDDIIELFRPFGKIIAVNYFAQQ-GFGFVQFNEAGSADESCRSL 139
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 30.7 bits (66), Expect = 0.53
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +2
Query: 89 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDA 241
V+VG + + ++ + F K G + S+ + + P G+ FIEF ++Q AE A
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVA 75
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 30.7 bits (66), Expect = 0.53
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAC 244
R+YV G+ E ++ L F KYG + + L+ P GF F+ F++ ++ D C
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDD-HDSVDQC 171
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 30.7 bits (66), Expect = 0.53
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAC 244
R+YV G+ E ++ L F KYG + + L+ P GF F+ F++ ++ D C
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDD-HDSVDQC 133
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 30.7 bits (66), Expect = 0.53
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAC 244
R+YV G+ E ++ L F KYG + + L+ P GF F+ F++ ++ D C
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDD-HDSVDQC 133
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 30.7 bits (66), Expect = 0.53
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAC 244
R+YV G+ E ++ L F KYG + + L+ P GF F+ F++ ++ D C
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDD-HDSVDQC 171
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 30.7 bits (66), Expect = 0.53
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAC 244
R+YV G+ E ++ L F KYG + + L+ P GF F+ F++ ++ D C
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDD-HDSVDQC 171
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 30.3 bits (65), Expect = 0.70
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +2
Query: 125 EDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDA 241
EDLE F ++GK+N+ + + +AFIEF+N + E A
Sbjct: 255 EDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 30.3 bits (65), Expect = 0.70
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +2
Query: 80 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDA 241
G VYVG ++DL F + G +++V + + P GFAF+EF A+ A
Sbjct: 3 GFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRA 61
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 30.3 bits (65), Expect = 0.70
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +2
Query: 125 EDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDA 241
EDLE F ++GK+N+ + + +AFIEF+N + E A
Sbjct: 255 EDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 30.3 bits (65), Expect = 0.70
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +2
Query: 125 EDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDA 241
EDLE F ++GK+N+ + + +AFIEF+N + E A
Sbjct: 186 EDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 229
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 30.3 bits (65), Expect = 0.70
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 89 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAM 253
++ + EG + E ++ F ++ L V N FAFIE+E+ +E A A+
Sbjct: 145 LFCSNIPEGTEPEQIQTIFSQFPGLREVRWMPNTKDFAFIEYESEDLSEPARQAL 199
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 29.9 bits (64), Expect = 0.93
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +2
Query: 95 VGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSAMMV 259
V L + + +++L F K G++ +++A + P GFAF+ FE+ +A A + +
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 260 LR 265
+R
Sbjct: 240 IR 241
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 89 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFE 217
++ L + E LE F+++ L + + N PG AF+EF+
Sbjct: 134 LFCTNLPDSATAEMLEIMFNQFAGLKDIRMVPNRPGIAFVEFD 176
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAED 238
R++VGG + +L F+K+ + V + + G+ FI FE +AE+
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 121
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAED 238
R++VGG + +L F+K+ + V + + G+ FI FE +AE+
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 122
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +2
Query: 89 VYVGGLVEGIKKEDLEREFDKYGKLNSV-----WVALNPPGFAFIEFENLQEAEDACSAM 253
+YVGGL E + + L + G + SV V N GF F+EF ++A+ A +
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 254 MVLR 265
+++
Sbjct: 75 NMIK 78
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +2
Query: 89 VYVGGLVEGIKKEDLEREFDKYGKLNSV-----WVALNPPGFAFIEFENLQEAEDACSAM 253
+YVGGL E + + L + G + SV V N GF F+EF ++A+ A +
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 254 MVLR 265
+++
Sbjct: 85 NMIK 88
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +2
Query: 89 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSAM 253
+YVGG E + ++ L F +G + ++ + ++ GF F+EF+ ++A A M
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 89 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVA--LNPPGFAFIEFENLQEAEDAC 244
+Y+ L I E++ F K+G + + V G AF+ +E++ +A+ AC
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIFDAKTAC 74
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 71 SSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN---PPGFAFIEFENLQEAEDA 241
+ G R++V + ++ DL F+K G + V + N GF F+ +N +A+ A
Sbjct: 96 TDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRA 155
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 71 SSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN---PPGFAFIEFENLQEAEDA 241
+ G R++V + ++ DL F+K G + V + N GF F+ +N +A+ A
Sbjct: 96 TDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRA 155
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +2
Query: 71 SSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPP----GFAFIEFENLQEAED 238
+ G T V V L I ++ + F+ +G++ + + ++ GFA I F N +A+
Sbjct: 123 NKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQK 182
Query: 239 ACSAM 253
+C +
Sbjct: 183 SCEQL 187
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +2
Query: 71 SSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPP----GFAFIEFENLQEAED 238
+ G T V V L I ++ + F+ +G++ + + ++ GFA I F N +A+
Sbjct: 268 NKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQK 327
Query: 239 ACSAM 253
+C +
Sbjct: 328 SCEQL 332
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = +2
Query: 80 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNP-----PGFAFIEFENLQEAEDA 241
G +YVG + + ++ L F+K GK+ + + ++P G+AF+ + N ++A A
Sbjct: 199 GHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAA 257
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = +2
Query: 89 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAE 235
+YVG L K++ + F + G + V + L+ P GF F+E+ ++AE
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAE 92
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 80 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDAC 244
G +++ L + DL F +G + S V ++ F F+ +EN Q A +A
Sbjct: 334 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 393
Query: 245 SAM 253
SAM
Sbjct: 394 SAM 396
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 80 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDAC 244
G +++ L + DL F +G + S V ++ F F+ +EN Q A +A
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 245 SAM 253
SAM
Sbjct: 558 SAM 560
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 80 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDAC 244
G +++ L + DL F +G + S V ++ F F+ +EN Q A +A
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 245 SAM 253
SAM
Sbjct: 558 SAM 560
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 80 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDAC 244
G +++ L + DL F +G + S V ++ F F+ +EN Q A +A
Sbjct: 427 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 486
Query: 245 SAM 253
SAM
Sbjct: 487 SAM 489
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 80 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDAC 244
G +++ L + DL F +G + S V ++ F F+ +EN Q A +A
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 245 SAM 253
SAM
Sbjct: 558 SAM 560
>AC024793-5|AAF60689.1| 79|Caenorhabditis elegans Hypothetical
protein Y48G1BL.4 protein.
Length = 79
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 86 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAED 238
RVY+G D E F YGKL + N G +F++ +A+D
Sbjct: 3 RVYIGRFPNRASDRDAEHFFCDYGKLPDA-IMKNVFGVGCKDFQDQSDADD 52
>U39853-2|AAK39225.1| 771|Caenorhabditis elegans Kinase suppressor
of activatedras protein 1 protein.
Length = 771
Score = 27.1 bits (57), Expect = 6.6
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 249 ALHASSASCKFSNSMKAKPGGFSATQTEFSFPYLSNSRSRSSFLIPSTRP-PTYTRVP 79
A+ +SS++ + S A P G S + + PY RS FL P T + R+P
Sbjct: 315 AIDSSSSTNSSAPSTPALPAGISGNVSSLTAPY----RSERKFLFPDTENYSVHNRLP 368
>U38820-1|AAA92436.1| 771|Caenorhabditis elegans KSR-1 protein.
Length = 771
Score = 27.1 bits (57), Expect = 6.6
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 249 ALHASSASCKFSNSMKAKPGGFSATQTEFSFPYLSNSRSRSSFLIPSTRP-PTYTRVP 79
A+ +SS++ + S A P G S + + PY RS FL P T + R+P
Sbjct: 315 AIDSSSSTNSSAPSTPALPAGISGNVSSLTAPY----RSERKFLFPDTENYSVHNRLP 368
>U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin protein
1, isoform b protein.
Length = 1028
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Frame = -1
Query: 219 FSNSMKAKPGGFSATQTEFSFPYLSNSRSRSSFLIPSTR--------PPTYTRVPPEL 70
FS P +A+ + FS L+N+ + S+ +P++ PPT RVPP++
Sbjct: 2 FSRRTTPSPSITTASSSTFSISNLTNNNATSTSDLPASAISNIVPQIPPTPRRVPPKI 59
>S80647-1|AAB35769.1| 771|Caenorhabditis elegans KSR-1 protein.
Length = 771
Score = 27.1 bits (57), Expect = 6.6
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 249 ALHASSASCKFSNSMKAKPGGFSATQTEFSFPYLSNSRSRSSFLIPSTRP-PTYTRVP 79
A+ +SS++ + S A P G S + + PY RS FL P T + R+P
Sbjct: 315 AIDSSSSTNSSAPSTPALPAGISGNVSSLTAPY----RSERKFLFPDTENYSVHNRLP 368
>U88175-6|AAB42283.1| 234|Caenorhabditis elegans Hypothetical
protein F21F3.6 protein.
Length = 234
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 126 SFLIPSTRPPTYTRVPPEL 70
+F + TRPP YTR+P ++
Sbjct: 210 AFAVDFTRPPPYTRLPTDV 228
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 272 PNISVPSSRYTHLPPPASSQ 213
P +SVPSS+ T PPP + Q
Sbjct: 162 PPVSVPSSKPTPPPPPPAQQ 181
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 272 PNISVPSSRYTHLPPPASSQ 213
P +SVPSS+ T PPP + Q
Sbjct: 162 PPVSVPSSKPTPPPPPPAQQ 181
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,034,872
Number of Sequences: 27780
Number of extensions: 144785
Number of successful extensions: 557
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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