Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0638
         (367 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   3.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          20   8.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   8.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   8.0  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -2

Query: 282 GSGYLFCSVLISYIRVLLSHTDHHALMAGPSXDRGEHGARSIISC 148
           GS Y+   V     RVLL+ TD   +    S D  E+G     +C
Sbjct: 329 GSNYMQTRVPAWCDRVLLNPTDKMLVQDISSPDAVEYGIIGPTTC 373


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 353 EGMMQNLLHVIPVXDDS 303
           EGM  N+L V+   DDS
Sbjct: 610 EGMPYNVLVVVSPFDDS 626


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 353 EGMMQNLLHVIPVXDDS 303
           EGM  N+L V+   DDS
Sbjct: 610 EGMPYNVLVVVSPFDDS 626


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 126 GAIVYYQRGNFFVAHLELVF 67
           G +VY   G+F++  L ++F
Sbjct: 246 GYVVYSALGSFYIPMLVMLF 265


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,757
Number of Sequences: 438
Number of extensions: 1966
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)