Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0636
         (626 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22UD1 Cluster: Cyclic nucleotide-binding domain contai...    34   2.4  
UniRef50_Q5XLG7 Cluster: SGS4; n=1; Anopheles gambiae|Rep: SGS4 ...    33   7.4  
UniRef50_A6SMZ1 Cluster: Putative uncharacterized protein; n=1; ...    32   9.8  

>UniRef50_Q22UD1 Cluster: Cyclic nucleotide-binding domain
           containing protein; n=1; Tetrahymena thermophila
           SB210|Rep: Cyclic nucleotide-binding domain containing
           protein - Tetrahymena thermophila SB210
          Length = 900

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 23/65 (35%), Positives = 36/65 (55%)
 Frame = +1

Query: 7   LKELYTYSQNYKSISI*IPNRTRDETKTSSRTKYVIKKSTDWSHSERQSLWKEYEIDYLI 186
           +KE  T  Q +K+  I   NR  +   T    KY+I+KSTD + + +QSL ++ +I   I
Sbjct: 399 IKEDQTEPQYFKNNLI---NRNSNFKMTKDENKYIIEKSTDGAINLKQSLKRQNQIQKNI 455

Query: 187 QEAKV 201
             +KV
Sbjct: 456 TISKV 460


>UniRef50_Q5XLG7 Cluster: SGS4; n=1; Anopheles gambiae|Rep: SGS4 -
            Anopheles gambiae (African malaria mosquito)
          Length = 3398

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +1

Query: 19   YTYSQNYKSISI*IPNRTRDETKTSSRTKYVIKKSTDWSHSERQSLWK-EYEIDY 180
            YTYS+ Y  +   +P +     KT+SRT+  +         + ++LW+  YE DY
Sbjct: 1877 YTYSETYGHLIEVLPPQFHALAKTTSRTRPFLTGGNTQEEIKLRNLWRVSYEYDY 1931


>UniRef50_A6SMZ1 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 1198

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 386 QNRCRYITDCT-YACICLLQPPSIVSSNLKSQIN 288
           +N C Y   C   AC+CL   PS+VSS L  Q N
Sbjct: 461 ENACEYGVYCPPTACVCLQLGPSLVSSALPKQTN 494


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 599,974,195
Number of Sequences: 1657284
Number of extensions: 11532600
Number of successful extensions: 26483
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26463
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)