Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0636
         (626 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0629 + 12386214-12386533,12386666-12386749,12386834-123869...    29   3.0  
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631...    27   9.2  

>02_02_0629 +
           12386214-12386533,12386666-12386749,12386834-12386972,
           12387990-12388061,12388158-12388252,12388397-12388483,
           12388554-12388629,12388738-12389031,12389526-12389665,
           12389751-12389939,12390028-12390118,12390206-12390332,
           12391146-12391253,12391343-12391433,12391676-12391685
          Length = 640

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +2

Query: 344 YMHKCSL*Y---NDIDSAFYSVWCRLICKYLSSINICRSLQIQQPTDRLI 484
           Y H+C L     ND +      W    C+ + + + CR  + QQPT RL+
Sbjct: 229 YCHRCLLKRYDENDEEVGQMEAWICPKCRGICNCSCCRRKKGQQPTGRLV 278


>12_02_0522 -
           19960092-19960595,19962737-19962880,19963042-19963131,
           19963215-19963320,19963400-19963574,19963849-19963951,
           19964382-19964636,19964726-19964803,19964908-19965000,
           19965091-19965222,19965898-19966002,19966127-19966201,
           19966284-19966340,19966419-19966532,19966613-19966756,
           19966886-19966969,19967071-19967164,19967244-19967369,
           19967507-19967580,19967672-19967875,19968234-19968388,
           19968860-19968947,19969505-19969730,19970235-19970286,
           19970766-19970958,19973221-19973314,19973744-19973788,
           19974874-19974896
          Length = 1210

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
 Frame = +1

Query: 76  DETKTS--SRTKYVIKKSTDWS-HSERQSLW 159
           DETKT    +TK V++K  DW   +E Q +W
Sbjct: 586 DETKTEVKKKTKTVVEKYWDWELTNETQPIW 616


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,500,915
Number of Sequences: 37544
Number of extensions: 298885
Number of successful extensions: 594
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)