Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0636
         (626 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92773-1|CAB07131.1|  395|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z81495-4|CAB04058.1|  171|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF303268-1|AAG50226.1|  171|Caenorhabditis elegans 2O123 protein.      29   2.7  
Z99281-22|CAE18024.1|  181|Caenorhabditis elegans Hypothetical p...    29   3.6  
U50068-8|AAB37739.1|  865|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z79754-12|CAD57695.1|  440|Caenorhabditis elegans Hypothetical p...    28   4.8  
Z79754-11|CAB02100.1|  478|Caenorhabditis elegans Hypothetical p...    28   4.8  
Z27080-5|CAA81605.1| 1247|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z22176-14|CAA80143.1| 1247|Caenorhabditis elegans Hypothetical p...    28   4.8  
AF101078-1|AAC72406.1| 1247|Caenorhabditis elegans CLU-1 protein.      28   4.8  
Z79598-4|CAB01868.2|  745|Caenorhabditis elegans Hypothetical pr...    28   6.3  

>Z92773-1|CAB07131.1|  395|Caenorhabditis elegans Hypothetical
           protein W08E3.3 protein.
          Length = 395

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
 Frame = +1

Query: 67  RTRDETKTSSRTKYV-IKKSTDWSHSERQSLWKEYEID----YLIQEAKVLLYLV 216
           R  D+TK       V +KK  +     RQ LW E EI+    +L   AK ++YLV
Sbjct: 172 RANDKTKKIEYDTLVRVKKCLEEKKPVRQELWNEKEIEILNKHLFLTAKPIVYLV 226


>AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical
           protein C17A2.5 protein.
          Length = 731

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 58  IPNRTRDETKTSSRTKYVIKKSTDWSHSERQSLWKEYEIDY 180
           IP+R  +    +  T+  IK +  W  ++R+SLW  Y  DY
Sbjct: 442 IPSRIENNNNKTKSTEDAIKMNHLWDLNDRKSLWVPY-CDY 481


>Z81495-4|CAB04058.1|  171|Caenorhabditis elegans Hypothetical
           protein F08G2.4 protein.
          Length = 171

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 85  KTSSRTKYVIKKSTDWSHSERQSLWKEYEIDYLIQEAKVLLYLV-LTFHCT 234
           K S +   + KK TDW+   ++  W E ++D L+++ +  L  + L   CT
Sbjct: 74  KASEKILELRKKLTDWNMDPKKRKWIEDDLDSLVRKQESALSRIRLAEKCT 124


>AF303268-1|AAG50226.1|  171|Caenorhabditis elegans 2O123 protein.
          Length = 171

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 85  KTSSRTKYVIKKSTDWSHSERQSLWKEYEIDYLIQEAKVLLYLV-LTFHCT 234
           K S +   + KK TDW+   ++  W E ++D L+++ +  L  + L   CT
Sbjct: 74  KASEKILELRKKLTDWNMDPKKRKWIEDDLDSLVRKQESALSRIRLAEKCT 124


>Z99281-22|CAE18024.1|  181|Caenorhabditis elegans Hypothetical
           protein Y57G11C.41 protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 318 NRRRLEETYTCISAV-CDITTSILHF 392
           NR+ +EE  TC+  + CD+T S + F
Sbjct: 56  NRKSIEEVQTCVGVLHCDLTKSYMKF 81


>U50068-8|AAB37739.1|  865|Caenorhabditis elegans Hypothetical
           protein C01G5.8 protein.
          Length = 865

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 58  IPNRTRDETKTSSRTKYVIKKSTDWSHSERQS 153
           +P+ + D T+ S   + VIKKS +W +  R+S
Sbjct: 133 MPSESLDVTEISENIEKVIKKSPEWINHRRRS 164


>Z79754-12|CAD57695.1|  440|Caenorhabditis elegans Hypothetical
           protein F25H2.12b protein.
          Length = 440

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +1

Query: 25  YSQNYKSISI*IPNRTRDETKTSSRTKYVIKKSTDWSHSERQSLWKEYEIDYLIQEA 195
           Y + ++      P    +E + S  T +   KST +  S++   W+  EIDYL++EA
Sbjct: 238 YHKEFQCFHFLRPENNENEREISENTSF--GKSTVFPLSKK---WENVEIDYLLREA 289


>Z79754-11|CAB02100.1|  478|Caenorhabditis elegans Hypothetical
           protein F25H2.12a protein.
          Length = 478

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +1

Query: 25  YSQNYKSISI*IPNRTRDETKTSSRTKYVIKKSTDWSHSERQSLWKEYEIDYLIQEA 195
           Y + ++      P    +E + S  T +   KST +  S++   W+  EIDYL++EA
Sbjct: 276 YHKEFQCFHFLRPENNENEREISENTSF--GKSTVFPLSKK---WENVEIDYLLREA 327


>Z27080-5|CAA81605.1| 1247|Caenorhabditis elegans Hypothetical
           protein F55H2.6 protein.
          Length = 1247

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/60 (21%), Positives = 31/60 (51%)
 Frame = -1

Query: 401 TLNKMQNRCRYITDCTYACICLLQPPSIVSSNLKSQINQANTQPRVTNRHQNI*CKVQWN 222
           T +++     +I +C ++ +     PS +++N+  + N+ N + RVT+   ++     WN
Sbjct: 806 TADQLSASTSHILNCLFSVVL---DPSPIAANVAKKANKKNGKKRVTSAWSSLTTSALWN 862


>Z22176-14|CAA80143.1| 1247|Caenorhabditis elegans Hypothetical
           protein F55H2.6 protein.
          Length = 1247

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/60 (21%), Positives = 31/60 (51%)
 Frame = -1

Query: 401 TLNKMQNRCRYITDCTYACICLLQPPSIVSSNLKSQINQANTQPRVTNRHQNI*CKVQWN 222
           T +++     +I +C ++ +     PS +++N+  + N+ N + RVT+   ++     WN
Sbjct: 806 TADQLSASTSHILNCLFSVVL---DPSPIAANVAKKANKKNGKKRVTSAWSSLTTSALWN 862


>AF101078-1|AAC72406.1| 1247|Caenorhabditis elegans CLU-1 protein.
          Length = 1247

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/60 (21%), Positives = 31/60 (51%)
 Frame = -1

Query: 401 TLNKMQNRCRYITDCTYACICLLQPPSIVSSNLKSQINQANTQPRVTNRHQNI*CKVQWN 222
           T +++     +I +C ++ +     PS +++N+  + N+ N + RVT+   ++     WN
Sbjct: 806 TADQLSASTSHILNCLFSVVL---DPSPIAANVAKKANKKNGKKRVTSAWSSLTTSALWN 862


>Z79598-4|CAB01868.2|  745|Caenorhabditis elegans Hypothetical
           protein C44H4.4 protein.
          Length = 745

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 100 TKYVIKKSTDWSHSERQSLWKEYEIDYLIQEAKVLLYLVLT 222
           TK++ + + D  H        +  +D+L   A++ LY+VLT
Sbjct: 673 TKFLDQLTLDMKHYNTNKPKSDVTVDFLASIARIRLYIVLT 713


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,434,681
Number of Sequences: 27780
Number of extensions: 304193
Number of successful extensions: 751
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)