Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0635
(506 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0920 - 22603868-22603964,22604110-22604222,22604281-226044... 112 1e-25
07_03_0919 - 22594980-22595111,22595398-22595427,22595522-225955... 112 1e-25
04_04_1135 + 31140032-31140043,31140552-31140592,31140680-311407... 112 1e-25
04_04_1134 + 31137326-31137337,31137964-31138004,31138089-311381... 112 1e-25
04_04_0417 - 25052305-25052398,25052583-25052672,25052740-250529... 109 9e-25
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 94 7e-20
04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062... 31 0.53
08_02_0383 - 16539472-16539633,16543044-16543205 31 0.70
08_01_1013 + 10251463-10251858,10252366-10252434,10252545-102526... 30 0.93
10_08_0762 - 20410681-20411834,20411999-20412098,20412200-204122... 27 6.5
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 27 8.7
>07_03_0920 -
22603868-22603964,22604110-22604222,22604281-22604429,
22604732-22604832,22604917-22604957,22605584-22605595
Length = 170
Score = 112 bits (270), Expect = 1e-25
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 ADQTERSFQKQPTVFLNRKK-GIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPF 177
A+QTE++F KQP VFL+ KK G G K + R+ K +GLGFKTPREAIEGTYIDKKCPF
Sbjct: 2 AEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 61
Query: 178 TGNVSIRGRILTXVVQKMKMQRTIVI 255
TG VSIRGRI+ KM RTI++
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIV 87
Score = 79.0 bits (186), Expect = 2e-15
Identities = 40/66 (60%), Positives = 48/66 (72%), Gaps = 9/66 (13%)
Frame = +3
Query: 255 RRDYLHYLPKYNR---------FEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVR 407
RR+YLH++ KY R +EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVR
Sbjct: 88 RRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVR 146
Query: 408 FNVLKV 425
FNVLKV
Sbjct: 147 FNVLKV 152
>07_03_0919 -
22594980-22595111,22595398-22595427,22595522-22595587,
22596021-22596107,22596868-22596921,22597696-22597762,
22598099-22598215,22598536-22598637,22598784-22598902,
22598966-22599049,22599220-22599354,22599470-22599505,
22599581-22599700,22600557-22600645,22601507-22601596,
22601629-22601802,22602135-22602235,22602323-22602363,
22602872-22602883
Length = 551
Score = 112 bits (270), Expect = 1e-25
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 ADQTERSFQKQPTVFLNRKK-GIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPF 177
A+QTE++F KQP VFL+ KK G G K + R+ K +GLGFKTPREAIEGTYIDKKCPF
Sbjct: 2 AEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 61
Query: 178 TGNVSIRGRILTXVVQKMKMQRTIVI 255
TG VSIRGRI+ KM RTI++
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIV 87
>04_04_1135 +
31140032-31140043,31140552-31140592,31140680-31140780,
31141113-31141419,31141565-31141661
Length = 185
Score = 112 bits (270), Expect = 1e-25
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 ADQTERSFQKQPTVFLNRKK-GIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPF 177
A+QTE++F KQP VFL+ KK G G K + R+ K +GLGFKTPREAIEGTYIDKKCPF
Sbjct: 2 AEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 61
Query: 178 TGNVSIRGRILTXVVQKMKMQRTIVI 255
TG VSIRGRI+ KM RTI++
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIV 87
Score = 71.7 bits (168), Expect = 3e-13
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 291 RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 425
R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 124 RYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 167
>04_04_1134 +
31137326-31137337,31137964-31138004,31138089-31138189,
31138489-31138637,31138696-31138808,31138954-31139050
Length = 170
Score = 112 bits (270), Expect = 1e-25
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 ADQTERSFQKQPTVFLNRKK-GIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPF 177
A+QTE++F KQP VFL+ KK G G K + R+ K +GLGFKTPREAIEGTYIDKKCPF
Sbjct: 2 AEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 61
Query: 178 TGNVSIRGRILTXVVQKMKMQRTIVI 255
TG VSIRGRI+ KM RTI++
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIV 87
Score = 79.0 bits (186), Expect = 2e-15
Identities = 40/66 (60%), Positives = 48/66 (72%), Gaps = 9/66 (13%)
Frame = +3
Query: 255 RRDYLHYLPKYNR---------FEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVR 407
RR+YLH++ KY R +EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVR
Sbjct: 88 RRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVR 146
Query: 408 FNVLKV 425
FNVLKV
Sbjct: 147 FNVLKV 152
>04_04_0417 -
25052305-25052398,25052583-25052672,25052740-25052905,
25053547-25053647,25053735-25053775,25054170-25054181
Length = 167
Score = 109 bits (263), Expect = 9e-25
Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 ADQTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPF 177
A+QTER+F KQP VFL KK G K + R+ K++GLGFKTPREAIEGTYIDKKCPF
Sbjct: 2 AEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCPF 61
Query: 178 TGNVSIRGRILTXVVQKMKMQRTIVI 255
TG VSIRGRI+ KM RTI++
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIV 87
Score = 81.0 bits (191), Expect = 5e-16
Identities = 40/64 (62%), Positives = 48/64 (75%), Gaps = 7/64 (10%)
Frame = +3
Query: 255 RRDYLHYLPKYNR-------FEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 413
RR+YLH++ KY R +EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFN
Sbjct: 88 RRNYLHFVKKYQRQVNLVAGYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFN 146
Query: 414 VLKV 425
VLKV
Sbjct: 147 VLKV 150
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 93.9 bits (223), Expect = 7e-20
Identities = 43/71 (60%), Positives = 51/71 (71%)
Frame = +1
Query: 43 FLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTXVV 222
F +K G G K + R+ K++GLGFKTPREAIEGTYIDKKCPFTG VSIRGRI+
Sbjct: 8 FSPKKSGKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTC 67
Query: 223 QKMKMQRTIVI 255
KM RTI++
Sbjct: 68 HSAKMNRTIIV 78
Score = 89.4 bits (212), Expect = 1e-18
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = +3
Query: 255 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 425
RR+YLH++ KY R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNV+KV
Sbjct: 79 RRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVIKV 134
>04_04_1693 + 35404336-35404515,35405732-35406019,35406189-35406278,
35406487-35406564,35406638-35406718,35407300-35407350,
35407788-35407933,35408169-35408235,35408328-35408387,
35408472-35408501,35408776-35408835,35408936-35409052,
35409790-35409903,35410068-35410166,35410572-35410697,
35410774-35410848,35410958-35411029,35411167-35411277,
35411760-35411843,35413149-35413256,35414207-35414308,
35414393-35414455,35414524-35414598,35414901-35414972,
35415063-35415187,35415251-35415302,35415380-35415448,
35415525-35415540,35415941-35415989,35416607-35417180
Length = 1077
Score = 31.1 bits (67), Expect = 0.53
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 279 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 410
PKY R E+ + H P ++GD+V + RP+SKT F
Sbjct: 996 PKYKRRERIKKKYQAH-DPD-NQFKVGDVVELRRSRPISKTKHF 1037
>08_02_0383 - 16539472-16539633,16543044-16543205
Length = 107
Score = 30.7 bits (66), Expect = 0.70
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +3
Query: 261 DYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 425
D L + YNR+ KR H D IGD V + RPLSK + V ++
Sbjct: 22 DRLFHHKMYNRYVKRTSKFMAHDET--EDCNIGDRVKLDPSRPLSKRKHWVVAEI 74
>08_01_1013 +
10251463-10251858,10252366-10252434,10252545-10252652,
10253261-10253326,10254258-10254395,10255047-10255094,
10256292-10256398,10257228-10257302,10258317-10258368,
10258485-10259068,10259944-10260150,10260236-10260407
Length = 673
Score = 30.3 bits (65), Expect = 0.93
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 225 EDEDAENYRDRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTV 404
E ED E+Y R +++ PK + M L PC+R E+ +I +PLS V
Sbjct: 106 EVEDEEDYVLREIDVYFTPKPFDEDTMLYVMQYPLRPCWRPYELNEICKEVRVKPLSSKV 165
Query: 405 RFNV 416
++
Sbjct: 166 EVDL 169
>10_08_0762 -
20410681-20411834,20411999-20412098,20412200-20412298,
20412563-20414133,20415080-20415128
Length = 990
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 225 EDEDAENYRDRRDYLHYLPKYNRFEKRHRNMS 320
+ EDAE Y +R L Y P+Y ++K +S
Sbjct: 85 KSEDAEPYPTQRGLLQYPPQYPAYDKYMTQLS 116
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 396 WTKVCIRRSLQYHQSPRP*SKATNVRTCSCAVSRTY 289
W C RR Y +SP P + R+ S + SR+Y
Sbjct: 129 WKNRCYRRGRSYSRSPSPRRGRSRGRSYSRSRSRSY 164
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,732,447
Number of Sequences: 37544
Number of extensions: 227021
Number of successful extensions: 531
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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