BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0635 (506 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 128 8e-30 BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 128 8e-30 BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 128 8e-30 BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 128 8e-30 BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 128 8e-30 BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 128 8e-30 BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 128 8e-30 BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 128 8e-30 AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 128 8e-30 AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 120 2e-27 BC017710-1|AAH17710.1| 423|Homo sapiens zinc finger protein 271... 33 0.43 AF159567-1|AAD43569.1| 423|Homo sapiens epstein-barr virus-indu... 33 0.43 AF153201-1|AAD38056.1| 423|Homo sapiens zinc finger protein dp ... 33 0.43 Z95636-1|CAB09137.1| 953|Homo sapiens laminin alpha 5 chain pro... 30 4.0 BC003355-1|AAH03355.1| 670|Homo sapiens LAMA5 protein protein. 30 4.0 AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein. 30 4.0 AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain pr... 30 4.0 AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein. 30 4.0 AK160365-1|BAD18708.1| 1651|Homo sapiens FLJ00261 protein protein. 29 9.3 >X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ribosomal protein S11. ). Length = 158 Score = 128 bits (310), Expect = 8e-30 Identities = 61/84 (72%), Positives = 72/84 (85%), Gaps = 1/84 (1%) Frame = +1 Query: 7 QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTG 183 QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKCPFTG Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64 Query: 184 NVSIRGRILTXVVQKMKMQRTIVI 255 NVSIRGRIL+ VV KMKMQRTIVI Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVI 88 Score = 120 bits (290), Expect = 2e-27 Identities = 52/57 (91%), Positives = 56/57 (98%) Frame = +3 Query: 255 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 425 RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. Length = 158 Score = 128 bits (310), Expect = 8e-30 Identities = 61/84 (72%), Positives = 72/84 (85%), Gaps = 1/84 (1%) Frame = +1 Query: 7 QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTG 183 QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKCPFTG Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64 Query: 184 NVSIRGRILTXVVQKMKMQRTIVI 255 NVSIRGRIL+ VV KMKMQRTIVI Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVI 88 Score = 120 bits (290), Expect = 2e-27 Identities = 52/57 (91%), Positives = 56/57 (98%) Frame = +3 Query: 255 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 425 RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 protein. Length = 158 Score = 128 bits (310), Expect = 8e-30 Identities = 61/84 (72%), Positives = 72/84 (85%), Gaps = 1/84 (1%) Frame = +1 Query: 7 QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTG 183 QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKCPFTG Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64 Query: 184 NVSIRGRILTXVVQKMKMQRTIVI 255 NVSIRGRIL+ VV KMKMQRTIVI Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVI 88 Score = 120 bits (290), Expect = 2e-27 Identities = 52/57 (91%), Positives = 56/57 (98%) Frame = +3 Query: 255 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 425 RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 protein. Length = 158 Score = 128 bits (310), Expect = 8e-30 Identities = 61/84 (72%), Positives = 72/84 (85%), Gaps = 1/84 (1%) Frame = +1 Query: 7 QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTG 183 QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKCPFTG Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64 Query: 184 NVSIRGRILTXVVQKMKMQRTIVI 255 NVSIRGRIL+ VV KMKMQRTIVI Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVI 88 Score = 120 bits (290), Expect = 2e-27 Identities = 52/57 (91%), Positives = 56/57 (98%) Frame = +3 Query: 255 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 425 RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 protein. Length = 158 Score = 128 bits (310), Expect = 8e-30 Identities = 61/84 (72%), Positives = 72/84 (85%), Gaps = 1/84 (1%) Frame = +1 Query: 7 QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTG 183 QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKCPFTG Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64 Query: 184 NVSIRGRILTXVVQKMKMQRTIVI 255 NVSIRGRIL+ VV KMKMQRTIVI Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVI 88 Score = 120 bits (290), Expect = 2e-27 Identities = 52/57 (91%), Positives = 56/57 (98%) Frame = +3 Query: 255 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 425 RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. Length = 158 Score = 128 bits (310), Expect = 8e-30 Identities = 61/84 (72%), Positives = 72/84 (85%), Gaps = 1/84 (1%) Frame = +1 Query: 7 QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTG 183 QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKCPFTG Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64 Query: 184 NVSIRGRILTXVVQKMKMQRTIVI 255 NVSIRGRIL+ VV KMKMQRTIVI Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVI 88 Score = 120 bits (290), Expect = 2e-27 Identities = 52/57 (91%), Positives = 56/57 (98%) Frame = +3 Query: 255 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 425 RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 protein. Length = 158 Score = 128 bits (310), Expect = 8e-30 Identities = 61/84 (72%), Positives = 72/84 (85%), Gaps = 1/84 (1%) Frame = +1 Query: 7 QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTG 183 QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKCPFTG Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64 Query: 184 NVSIRGRILTXVVQKMKMQRTIVI 255 NVSIRGRIL+ VV KMKMQRTIVI Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVI 88 Score = 120 bits (290), Expect = 2e-27 Identities = 52/57 (91%), Positives = 56/57 (98%) Frame = +3 Query: 255 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 425 RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 protein. Length = 158 Score = 128 bits (310), Expect = 8e-30 Identities = 61/84 (72%), Positives = 72/84 (85%), Gaps = 1/84 (1%) Frame = +1 Query: 7 QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTG 183 QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKCPFTG Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64 Query: 184 NVSIRGRILTXVVQKMKMQRTIVI 255 NVSIRGRIL+ VV KMKMQRTIVI Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVI 88 Score = 120 bits (290), Expect = 2e-27 Identities = 52/57 (91%), Positives = 56/57 (98%) Frame = +3 Query: 255 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 425 RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 protein. Length = 158 Score = 128 bits (310), Expect = 8e-30 Identities = 61/84 (72%), Positives = 72/84 (85%), Gaps = 1/84 (1%) Frame = +1 Query: 7 QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTG 183 QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKCPFTG Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64 Query: 184 NVSIRGRILTXVVQKMKMQRTIVI 255 NVSIRGRIL+ VV KMKMQRTIVI Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVI 88 Score = 120 bits (290), Expect = 2e-27 Identities = 52/57 (91%), Positives = 56/57 (98%) Frame = +3 Query: 255 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 425 RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 protein. Length = 83 Score = 120 bits (290), Expect = 2e-27 Identities = 52/57 (91%), Positives = 56/57 (98%) Frame = +3 Query: 255 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 425 RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 14 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 70 >BC017710-1|AAH17710.1| 423|Homo sapiens zinc finger protein 271 protein. Length = 423 Score = 33.5 bits (73), Expect = 0.43 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = -1 Query: 197 RIETL-PVKGHFLSM*VPSIASRGVLKPRPTSLWYLNGFLLRFTPIPFLRFRK 42 RI+TL ++G L ++ S G L R SL+Y+ GF+L PIP + K Sbjct: 37 RIQTLLNIEGSTLERNPINVMSVGKLLIRAQSLFYIRGFILERNPIPVINVAK 89 >AF159567-1|AAD43569.1| 423|Homo sapiens epstein-barr virus-induced zinc finger protein protein. Length = 423 Score = 33.5 bits (73), Expect = 0.43 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = -1 Query: 197 RIETL-PVKGHFLSM*VPSIASRGVLKPRPTSLWYLNGFLLRFTPIPFLRFRK 42 RI+TL ++G L ++ S G L R SL+Y+ GF+L PIP + K Sbjct: 37 RIQTLLNIEGSTLERNPINVMSVGKLLIRAQSLFYIRGFILERNPIPVINVAK 89 >AF153201-1|AAD38056.1| 423|Homo sapiens zinc finger protein dp protein. Length = 423 Score = 33.5 bits (73), Expect = 0.43 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = -1 Query: 197 RIETL-PVKGHFLSM*VPSIASRGVLKPRPTSLWYLNGFLLRFTPIPFLRFRK 42 RI+TL ++G L ++ S G L R SL+Y+ GF+L PIP + K Sbjct: 37 RIQTLLNIEGSTLERNPINVMSVGKLLIRAQSLFYIRGFILERNPIPVINVAK 89 >Z95636-1|CAB09137.1| 953|Homo sapiens laminin alpha 5 chain protein. Length = 953 Score = 30.3 bits (65), Expect = 4.0 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -1 Query: 137 SRGVLKPRPTS-LWYLNGFLLRFTPIPFLRFRKTVGC 30 + G+L RP ++Y+ G+ FTP P LRF GC Sbjct: 121 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 157 >BC003355-1|AAH03355.1| 670|Homo sapiens LAMA5 protein protein. Length = 670 Score = 30.3 bits (65), Expect = 4.0 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -1 Query: 137 SRGVLKPRPTS-LWYLNGFLLRFTPIPFLRFRKTVGC 30 + G+L RP ++Y+ G+ FTP P LRF GC Sbjct: 69 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 105 >AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein. Length = 3690 Score = 30.3 bits (65), Expect = 4.0 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -1 Query: 137 SRGVLKPRPTS-LWYLNGFLLRFTPIPFLRFRKTVGC 30 + G+L RP ++Y+ G+ FTP P LRF GC Sbjct: 2863 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 2899 >AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain precursor protein. Length = 3695 Score = 30.3 bits (65), Expect = 4.0 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -1 Query: 137 SRGVLKPRPTS-LWYLNGFLLRFTPIPFLRFRKTVGC 30 + G+L RP ++Y+ G+ FTP P LRF GC Sbjct: 2863 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 2899 >AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein. Length = 1645 Score = 30.3 bits (65), Expect = 4.0 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -1 Query: 137 SRGVLKPRPTS-LWYLNGFLLRFTPIPFLRFRKTVGC 30 + G+L RP ++Y+ G+ FTP P LRF GC Sbjct: 813 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 849 >AK160365-1|BAD18708.1| 1651|Homo sapiens FLJ00261 protein protein. Length = 1651 Score = 29.1 bits (62), Expect = 9.3 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -2 Query: 175 RDTSCQCRYPQSPHGES*NRGPHPCGISTVFCSASHQYLSCGS 47 R+TSC R P++ P PCG S + +A + + S G+ Sbjct: 598 RETSCAARAPETASAPLSMDDPSPCGTSEMCQAALYGFPSTGT 640 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 62,851,602 Number of Sequences: 237096 Number of extensions: 1207422 Number of successful extensions: 2406 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 2302 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2397 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 4706589866 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -