Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0635
         (506 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC...   119   2e-27
AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA...   119   2e-27
AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB...   110   9e-25

>AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC,
           isoform C protein.
          Length = 155

 Score =  119 bits (287), Expect = 2e-27
 Identities = 61/85 (71%), Positives = 70/85 (82%)
 Frame = +1

Query: 1   ADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFT 180
           ADQ ER+FQKQ  V LNRK   G+ + +K LR  +DVGLGFKTPREAI+GTYIDKKCP+T
Sbjct: 2   ADQNERAFQKQFGVNLNRKVKPGITK-KKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWT 60

Query: 181 GNVSIRGRILTXVVQKMKMQRTIVI 255
           G+V IRGRILT VV+K KMQRTIVI
Sbjct: 61  GDVRIRGRILTGVVRKAKMQRTIVI 85



 Score =  110 bits (265), Expect = 9e-25
 Identities = 50/57 (87%), Positives = 53/57 (92%)
 Frame = +3

Query: 255 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 425
           RRDYLH++ KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 86  RRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142


>AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA,
           isoform A protein.
          Length = 155

 Score =  119 bits (287), Expect = 2e-27
 Identities = 61/85 (71%), Positives = 70/85 (82%)
 Frame = +1

Query: 1   ADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFT 180
           ADQ ER+FQKQ  V LNRK   G+ + +K LR  +DVGLGFKTPREAI+GTYIDKKCP+T
Sbjct: 2   ADQNERAFQKQFGVNLNRKVKPGITK-KKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWT 60

Query: 181 GNVSIRGRILTXVVQKMKMQRTIVI 255
           G+V IRGRILT VV+K KMQRTIVI
Sbjct: 61  GDVRIRGRILTGVVRKAKMQRTIVI 85



 Score =  110 bits (265), Expect = 9e-25
 Identities = 50/57 (87%), Positives = 53/57 (92%)
 Frame = +3

Query: 255 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 425
           RRDYLH++ KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 86  RRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142


>AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB,
           isoform B protein.
          Length = 154

 Score =  110 bits (265), Expect = 9e-25
 Identities = 50/57 (87%), Positives = 53/57 (92%)
 Frame = +3

Query: 255 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 425
           RRDYLH++ KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 85  RRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 141



 Score =  106 bits (254), Expect = 2e-23
 Identities = 52/83 (62%), Positives = 67/83 (80%)
 Frame = +1

Query: 7   QTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGN 186
           QTERSF+KQ  V + R+K   +K+  +P R+++ +GLGF+ P EAI+GTYIDKKCP+TG+
Sbjct: 5   QTERSFRKQHAVVVVRRKSPNLKK--RP-RFYRQIGLGFRAPAEAIDGTYIDKKCPWTGD 61

Query: 187 VSIRGRILTXVVQKMKMQRTIVI 255
           V IRGRILT VV+K KMQRTIVI
Sbjct: 62  VRIRGRILTGVVRKAKMQRTIVI 84


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,794,892
Number of Sequences: 53049
Number of extensions: 389781
Number of successful extensions: 947
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)