Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0634
         (447 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1495 + 30566992-30567084,30567181-30567235,30567320-30567507     29   2.3  
11_06_0047 + 19595904-19596185,19596284-19596424,19597195-195973...    28   3.9  
09_06_0076 + 20710482-20710670,20711313-20711547,20711664-207116...    27   6.9  
12_02_0812 + 23383704-23384143,23384902-23385247                       27   9.1  
04_03_1037 - 21901989-21902468,21903308-21903526,21903984-219041...    27   9.1  

>06_03_1495 + 30566992-30567084,30567181-30567235,30567320-30567507
          Length = 111

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = -3

Query: 304 KSEAAXEQCAILCXLCNTVRPKSMSSGRHCEYGGKCQCY 188
           K E   + C + C  CN V P S    RH      C CY
Sbjct: 64  KKEMCNKMCNVCCNRCNCVPPGSGQDTRHL-----CPCY 97


>11_06_0047 +
           19595904-19596185,19596284-19596424,19597195-19597307,
           19597970-19598049,19598557-19598720,19598931-19599060,
           19599155-19599254,19599452-19599500,19599775-19599849,
           19600026-19600124,19600745-19600823,19600897-19601045,
           19601334-19601393,19601490-19601684
          Length = 571

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = +2

Query: 164 KWMTVIFLITLTFPAILAMTTGAHRLWAHRI 256
           KW   +FL   T  A L    G HRLW   I
Sbjct: 414 KWDFFVFLCMGTTTAFLGAAIGFHRLWTEPI 444


>09_06_0076 +
           20710482-20710670,20711313-20711547,20711664-20711689,
           20712000-20712293,20712603-20712728,20712827-20712896,
           20712992-20713182,20713394-20713519,20713878-20714279,
           20714364-20714758,20714861-20715315,20715403-20715524,
           20715653-20715693,20716026-20716129,20716363-20716576,
           20717667-20717780,20718576-20718612
          Length = 1046

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 11  ETKMEDGKQAATPAEEINLSNKREANW 91
           E K + GK+      E NL NK+EA W
Sbjct: 522 EEKKKQGKKIKEVCHECNLINKQEAIW 548


>12_02_0812 + 23383704-23384143,23384902-23385247
          Length = 261

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 175 RHPFNFIYQKVNSIKREQMYVNEKKYSG 92
           RHPF + +QK   +  E MY  +  Y G
Sbjct: 64  RHPFRYKHQKELFVAAEGMYTGQFVYCG 91


>04_03_1037 -
           21901989-21902468,21903308-21903526,21903984-21904106,
           21904225-21904392
          Length = 329

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 18  KWKTESKRRLQQRK*ISVTREKQTGPLYF 104
           KW  E KRR  Q +   VT++K     YF
Sbjct: 154 KWLEEEKRRQLQEEKEDVTKKKDLSDFYF 182


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,927,285
Number of Sequences: 37544
Number of extensions: 185167
Number of successful extensions: 470
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)