Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0632
         (289 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q62HR6 Cluster: 3-deoxy-D-manno-octulosonic-acid transf...    33   1.6  
UniRef50_A6RU53 Cluster: Predicted protein; n=1; Botryotinia fuc...    32   2.8  
UniRef50_Q7RIV8 Cluster: Developmental protein DG1037; n=3; Plas...    31   3.7  
UniRef50_A4M3Q3 Cluster: Lysine exporter protein; n=1; Geobacter...    31   6.5  
UniRef50_Q6ZRL9 Cluster: CDNA FLJ46257 fis, clone TESTI4024240; ...    31   6.5  
UniRef50_UPI0000E208F8 Cluster: PREDICTED: hypothetical protein;...    30   8.6  

>UniRef50_Q62HR6 Cluster: 3-deoxy-D-manno-octulosonic-acid
           transferase; n=29; Betaproteobacteria|Rep:
           3-deoxy-D-manno-octulosonic-acid transferase -
           Burkholderia mallei (Pseudomonas mallei)
          Length = 461

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -2

Query: 117 IRGPERHAWWAVSTIKIWRSVWSKRRSRTSEGHVIHRVG 1
           +R   R  WW V+ + + R VW  R+ R    H+  R G
Sbjct: 2   LRAIYRGLWWLVAPLAVLRLVWRSRKERGYREHIGERFG 40


>UniRef50_A6RU53 Cluster: Predicted protein; n=1; Botryotinia
           fuckeliana B05.10|Rep: Predicted protein - Botryotinia
           fuckeliana B05.10
          Length = 752

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +1

Query: 88  PPRMPFRPPNSVTPNSHES 144
           PPR PF PP+S + +SH+S
Sbjct: 134 PPRSPFHPPSSASSSSHQS 152


>UniRef50_Q7RIV8 Cluster: Developmental protein DG1037; n=3;
           Plasmodium (Vinckeia)|Rep: Developmental protein DG1037
           - Plasmodium yoelii yoelii
          Length = 345

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = +1

Query: 88  PPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPPS 237
           PP   +  PN++ P  +   KI           N  PK   PG+  P PS
Sbjct: 290 PPNPNYYSPNNLRPTDYIEDKIYYPNYQNNIDHNNTPKYYQPGNFNPHPS 339


>UniRef50_A4M3Q3 Cluster: Lysine exporter protein; n=1; Geobacter
           bemidjiensis Bem|Rep: Lysine exporter protein -
           Geobacter bemidjiensis Bem
          Length = 205

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 62  LQILIVETAHHACRSGPLILLPPILTN 142
           L ++I ET HH  RSG  + L P++T+
Sbjct: 23  LMLVISETLHHGTRSGVRVALSPVVTD 49


>UniRef50_Q6ZRL9 Cluster: CDNA FLJ46257 fis, clone TESTI4024240;
           n=3; Homo sapiens|Rep: CDNA FLJ46257 fis, clone
           TESTI4024240 - Homo sapiens (Human)
          Length = 174

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 23  PSEVLDRLLDQTDLQILIVETAHHACRSGPLILLPPI 133
           P+EV     DQ    + +  +  H CRS P ILLPP+
Sbjct: 96  PTEVTSPSADQASGPVALQNSKSHLCRSQP-ILLPPV 131


>UniRef50_UPI0000E208F8 Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 165

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = -2

Query: 174 GXQWRWGNLSRFVRIGGNRIRGPERHAWWAVSTIKIWRS 58
           G  W W   SR  R+ G    G  R  WW     + WR+
Sbjct: 30  GSGWDWAPWSRGTRLSGRL--GLSRSPWWGCGETQAWRA 66


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.314    0.137    0.449 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 279,864,391
Number of Sequences: 1657284
Number of extensions: 4865101
Number of successful extensions: 13094
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13066
length of database: 575,637,011
effective HSP length: 73
effective length of database: 454,655,279
effective search space used: 10002416138
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)