Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0632
(289 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22046| Best HMM Match : PPV_E1_N (HMM E-Value=0.61) 29 0.83
SB_50198| Best HMM Match : Frizzled (HMM E-Value=0) 28 1.4
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.5
SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26) 26 4.4
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 26 4.4
SB_48276| Best HMM Match : RVT_1 (HMM E-Value=0.57) 25 7.7
SB_46290| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33) 25 7.7
SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.7
SB_51460| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33) 25 7.7
SB_30090| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.7
SB_18103| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.7
SB_15313| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.7
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.7
>SB_22046| Best HMM Match : PPV_E1_N (HMM E-Value=0.61)
Length = 362
Score = 28.7 bits (61), Expect = 0.83
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = +1
Query: 88 PPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPPSNATQGSP 258
PP +P N+ T E K N+ PK+ PGD P S T+ SP
Sbjct: 295 PPEIPPDQDNTKT----EKKKRPVHEYELSPTSNKKPKKEPPGDTKQPKSKTTRPSP 347
>SB_50198| Best HMM Match : Frizzled (HMM E-Value=0)
Length = 654
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 117 IRGPERHAW-WAVSTIKIWRSVWSKRRSRTSEGHVIHRVG 1
I G + W W+ T K WR +SKR+ ++ V + G
Sbjct: 553 IIGITSNMWIWSTKTFKSWRKFYSKRKGGEAKKKVDYSAG 592
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 27.1 bits (57), Expect = 2.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 196 PKETNPGDVPPPPSNATQGSP 258
P +T PG +PPPP Q P
Sbjct: 416 PWQTTPGYIPPPPPGFPQFQP 436
>SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26)
Length = 687
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +1
Query: 88 PPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPP 234
PP P RPP+ HE G+ R P E PG P P
Sbjct: 332 PPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHE--PGRPPHEP 378
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +1
Query: 88 PPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPP 234
PP P RPP HE G+ R P E PG +P P
Sbjct: 374 PPHEPGRPPYEPGRPPHEPGRPPHELGRPPHEPGRPPHE--PGRLPHEP 420
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = +1
Query: 73 DSGNCPPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPP 234
D G PP P RPP+ HE G+ R P E PG P P
Sbjct: 321 DQGR-PPYEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHE--PGRPPHEP 371
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +1
Query: 88 PPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPP 234
PP P RPP+ HE G+ R P E PG P P
Sbjct: 339 PPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHE--PGRPPYEP 385
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +1
Query: 88 PPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPP 234
PP P RPP+ HE G+ R P E PG P P
Sbjct: 98 PPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHE--PGRPPHEP 144
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +1
Query: 88 PPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPP 234
PP P RPP HE G+ R P E PG +P P
Sbjct: 140 PPHEPGRPPYEPGRPPHEPGRPPHELGRPPHEPGRPPHE--PGRLPHEP 186
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = +1
Query: 73 DSGNCPPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPP 234
D G PP P RPP+ HE G+ R P E PG P P
Sbjct: 87 DQGR-PPYEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHE--PGRPPHEP 137
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +1
Query: 88 PPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPP 234
PP P RPP+ HE G+ R P E PG P P
Sbjct: 105 PPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHE--PGRPPYEP 151
>SB_48276| Best HMM Match : RVT_1 (HMM E-Value=0.57)
Length = 427
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 76 SGNCPPRMPFRPPNSVTPNS 135
SGN +PFR PN PN+
Sbjct: 84 SGNWQMPLPFRVPNQTMPNN 103
>SB_46290| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33)
Length = 1019
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 76 SGNCPPRMPFRPPNSVTPNS 135
SGN +PFR PN PN+
Sbjct: 247 SGNWQMPLPFRVPNQTMPNN 266
>SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 76 SGNCPPRMPFRPPNSVTPNS 135
SGN +PFR PN PN+
Sbjct: 868 SGNWQMPLPFRVPNQTMPNN 887
>SB_51460| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33)
Length = 1584
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 76 SGNCPPRMPFRPPNSVTPNS 135
SGN +PFR PN PN+
Sbjct: 561 SGNWQMPLPFRVPNQTMPNN 580
>SB_30090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 76 SGNCPPRMPFRPPNSVTPNS 135
SGN +PFR PN PN+
Sbjct: 112 SGNWQMPLPFRVPNQTMPNN 131
>SB_18103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 76 SGNCPPRMPFRPPNSVTPNS 135
SGN +PFR PN PN+
Sbjct: 45 SGNWQMPLPFRVPNQTMPNN 64
>SB_15313| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 76 SGNCPPRMPFRPPNSVTPNS 135
SGN +PFR PN PN+
Sbjct: 295 SGNWQMPLPFRVPNQTMPNN 314
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 25.4 bits (53), Expect = 7.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 187 NRXPKETNPGDVPPPPSNATQGSP 258
N P TN PPPP+N T P
Sbjct: 345 NPPPPPTNNPPSPPPPTNNTPPPP 368
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 187 NRXPKETNPGDVPPPPSNATQGSP 258
N+ P P + PPPP T G P
Sbjct: 372 NKPPPPPPPTNGPPPPPPPTNGPP 395
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.137 0.449
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,751,564
Number of Sequences: 59808
Number of extensions: 157773
Number of successful extensions: 413
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 16,821,457
effective HSP length: 70
effective length of database: 12,634,897
effective search space used: 315872425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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