Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0632
(289 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein. 31 0.51
AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein pr... 31 0.67
BC132788-1|AAI32789.1| 174|Homo sapiens FLJ46257 protein protein. 31 0.89
BC132762-1|AAI32763.1| 174|Homo sapiens FLJ46257 protein protein. 31 0.89
AL117329-1|CAI39696.1| 162|Homo sapiens protein ( Human DNA seq... 31 0.89
AK128136-1|BAC87291.1| 174|Homo sapiens protein ( Homo sapiens ... 31 0.89
AY157990-1|AAN76325.1| 1778|Homo sapiens myeloid/lymphoid or mix... 29 2.7
AY147037-1|AAN17675.1| 1858|Homo sapiens MLL5 protein. 29 2.7
AF519459-1|AAM74947.1| 1858|Homo sapiens MLL5 protein. 29 2.7
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 28 6.3
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 28 6.3
BC011517-1|AAH11517.1| 145|Homo sapiens brain and acute leukemi... 28 6.3
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 28 6.3
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 28 6.3
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 28 6.3
AK022077-1|BAB13960.1| 145|Homo sapiens protein ( Homo sapiens ... 28 6.3
AF371319-1|AAL50515.1| 145|Homo sapiens BAALC isoform 1-6-8 pro... 28 6.3
AF363578-3|AAL50377.1| 145|Homo sapiens BAALC 1-6-8 protein. 28 6.3
AY191222-1|AAP20104.1| 82|Homo sapiens transformation-related ... 27 8.3
>AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.
Length = 1112
Score = 31.5 bits (68), Expect = 0.51
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +1
Query: 76 SGNCPPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPP-PSNATQG 252
SG PP P PP+S TP + ++G + P P PPP P A++
Sbjct: 542 SGPLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPPPLPGPASET 601
Query: 253 SP 258
P
Sbjct: 602 VP 603
>AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein
protein.
Length = 1009
Score = 31.1 bits (67), Expect = 0.67
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +1
Query: 76 SGNCPPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPP-PSNATQG 252
SG PP P PP+S TP + ++G + P P PPP P A +
Sbjct: 439 SGPLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPPPLPGPAAET 498
Query: 253 SP 258
P
Sbjct: 499 VP 500
>BC132788-1|AAI32789.1| 174|Homo sapiens FLJ46257 protein protein.
Length = 174
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 23 PSEVLDRLLDQTDLQILIVETAHHACRSGPLILLPPI 133
P+EV DQ + + + H CRS P ILLPP+
Sbjct: 96 PTEVTSPSADQASGPVALQNSKSHLCRSQP-ILLPPV 131
>BC132762-1|AAI32763.1| 174|Homo sapiens FLJ46257 protein protein.
Length = 174
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 23 PSEVLDRLLDQTDLQILIVETAHHACRSGPLILLPPI 133
P+EV DQ + + + H CRS P ILLPP+
Sbjct: 96 PTEVTSPSADQASGPVALQNSKSHLCRSQP-ILLPPV 131
>AL117329-1|CAI39696.1| 162|Homo sapiens protein ( Human DNA
sequence from clone RP11-191L9 on chromosome 22. ).
Length = 162
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 23 PSEVLDRLLDQTDLQILIVETAHHACRSGPLILLPPI 133
P+EV DQ + + + H CRS P ILLPP+
Sbjct: 84 PTEVTSPSADQASGPVALQNSKSHLCRSQP-ILLPPV 119
>AK128136-1|BAC87291.1| 174|Homo sapiens protein ( Homo sapiens
cDNA FLJ46257 fis, clone TESTI4024240. ).
Length = 174
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 23 PSEVLDRLLDQTDLQILIVETAHHACRSGPLILLPPI 133
P+EV DQ + + + H CRS P ILLPP+
Sbjct: 96 PTEVTSPSADQASGPVALQNSKSHLCRSQP-ILLPPV 131
>AY157990-1|AAN76325.1| 1778|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia 5 protein.
Length = 1778
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +1
Query: 82 NCPPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPPSNAT 246
+ PP P PP+SV + H + P +P VPP PS AT
Sbjct: 1633 SAPPPPPPPPPSSVLASGHHTTSAQALHHPPHQGPPLFPSSAHP-TVPPYPSQAT 1686
>AY147037-1|AAN17675.1| 1858|Homo sapiens MLL5 protein.
Length = 1858
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +1
Query: 82 NCPPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPPSNAT 246
+ PP P PP+SV + H + P +P VPP PS AT
Sbjct: 1713 SAPPPPPPPPPSSVLASGHHTTSAQALHHPPHQGPPLFPSSAHP-TVPPYPSQAT 1766
>AF519459-1|AAM74947.1| 1858|Homo sapiens MLL5 protein.
Length = 1858
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +1
Query: 82 NCPPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPPSNAT 246
+ PP P PP+SV + H + P +P VPP PS AT
Sbjct: 1713 SAPPPPPPPPPSSVLASGHHTTSAQALHHPPHQGPPLFPSSAHP-TVPPYPSQAT 1766
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/59 (27%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +1
Query: 88 PPRMPFRPPNSVTPNSHESGKIXXXXXXXXXX--QNRXPKETNPGDVPPPPSNATQGSP 258
PP +P PP + P H + +R P T+P PPP G P
Sbjct: 340 PPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPP 398
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/59 (27%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +1
Query: 88 PPRMPFRPPNSVTPNSHESGKIXXXXXXXXXX--QNRXPKETNPGDVPPPPSNATQGSP 258
PP +P PP + P H + +R P T+P PPP G P
Sbjct: 340 PPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPP 398
>BC011517-1|AAH11517.1| 145|Homo sapiens brain and acute leukemia,
cytoplasmic protein.
Length = 145
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 109 PPNSVTPNSH-ESGKIXXXXXXXXXXQNRXPKETNPGDVPPP 231
PP++ P+S E+G + N P+ T PG +P P
Sbjct: 36 PPSAAAPDSGPEAGGLHSGMLEDGLPSNGVPRSTAPGGIPNP 77
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/59 (27%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +1
Query: 88 PPRMPFRPPNSVTPNSHESGKIXXXXXXXXXX--QNRXPKETNPGDVPPPPSNATQGSP 258
PP +P PP + P H + +R P T+P PPP G P
Sbjct: 267 PPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPP 325
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/59 (27%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +1
Query: 88 PPRMPFRPPNSVTPNSHESGKIXXXXXXXXXX--QNRXPKETNPGDVPPPPSNATQGSP 258
PP +P PP + P H + +R P T+P PPP G P
Sbjct: 377 PPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPP 435
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/59 (27%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +1
Query: 88 PPRMPFRPPNSVTPNSHESGKIXXXXXXXXXX--QNRXPKETNPGDVPPPPSNATQGSP 258
PP +P PP + P H + +R P T+P PPP G P
Sbjct: 340 PPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPP 398
>AK022077-1|BAB13960.1| 145|Homo sapiens protein ( Homo sapiens
cDNA FLJ12015 fis, clone HEMBB1001695. ).
Length = 145
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 109 PPNSVTPNSH-ESGKIXXXXXXXXXXQNRXPKETNPGDVPPP 231
PP++ P+S E+G + N P+ T PG +P P
Sbjct: 36 PPSAAAPDSGPEAGGLHSGMLEDGLPSNGVPRSTAPGGIPNP 77
>AF371319-1|AAL50515.1| 145|Homo sapiens BAALC isoform 1-6-8
protein.
Length = 145
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 109 PPNSVTPNSH-ESGKIXXXXXXXXXXQNRXPKETNPGDVPPP 231
PP++ P+S E+G + N P+ T PG +P P
Sbjct: 36 PPSAAAPDSGPEAGGLHSGMLEDGLPSNGVPRSTAPGGIPNP 77
>AF363578-3|AAL50377.1| 145|Homo sapiens BAALC 1-6-8 protein.
Length = 145
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 109 PPNSVTPNSH-ESGKIXXXXXXXXXXQNRXPKETNPGDVPPP 231
PP++ P+S E+G + N P+ T PG +P P
Sbjct: 36 PPSAAAPDSGPEAGGLHSGMLEDGLPSNGVPRSTAPGGIPNP 77
>AY191222-1|AAP20104.1| 82|Homo sapiens transformation-related
gene 6 protein.
Length = 82
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = -2
Query: 138 VRIGGNRIRGPERHAWWAVSTIKIWRSVWSKRRSRTSEGHVI 13
V +G R P R ++ WR + R T EGH++
Sbjct: 16 VTLGAGHSRSPSRRVLSVSFILRTWRLPYLGRHPSTCEGHLL 57
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.137 0.449
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,935,495
Number of Sequences: 237096
Number of extensions: 860068
Number of successful extensions: 2187
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2176
length of database: 76,859,062
effective HSP length: 72
effective length of database: 59,788,150
effective search space used: 1375127450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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